BAC Information

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BAC

Clone NameB6Ng01-286P10
Chromosome9 (Build37)
Map Location 75,091,364 - 75,271,815
singlet/doubletdoublet
Overlap geneMyo5c, Gnb5, Bcl2l10, LOC384954, Mapk6
Upstream geneNr1h2-ps, LOC100040764, Onecut1, BC031353, Arpp19, LOC100040812, Myo5a, LOC677501
Downstream geneLeo1, EG666190, LOC100042070, Tmod3, Tmod2, Lysmd2, Scg3, LOC100042107, Bmp5, EG620071, Hmgcll1, Gfral, Hcrtr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286P10.bB6Ng01-286P10.g
ACCGA085019GA085020
length1,079952
definitionB6Ng01-286P10.b B6Ng01-286P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,091,364 - 75,092,444)(75,271,256 - 75,271,815)
sequence
gaattccttataaacgttcaatgctgcaatttacaaaatacacagagaca
tgccacatactacttccgggcatctggtcctggatatcagacctttcctg
agatctcagaagttgcagagaaggaaagatccatgctctggggtcaggca
tcaccacttgttaagtccgtatcccttactctccacacacagccaaggag
ctaatgacattgtgacatcacaggtcctgaagtggaggcatcttgcaggg
tggcttgctcttcagtagctctctgtaactgaacgccacactgggtccta
agtacctcaggaagctgagcctagggagggaagacttgagaaagcagctg
cttgtgcaattagccggctccaggtggctgttccctggccagggacgcag
aatggcaggcagccagtgcctcttaccttaacccttccttgtaccagagg
acaaagcttgctttgtgaagagtatgtcacccctgcctccatctctcagt
ctcatgttttcccctcccccagagatgactagctagctgataagctctct
ctttctccctctctccctcctccccttcaacgtgtcaactaaggacccac
ttggcaatttcagagccatgaggcaccttaggctgtgttgtcctagcaac
agcatctttccacgtgtccattcccaaggcccctatggtagacatagggt
ggggccactggatgcatgctcatgggcttcctaccaccttccatcacagc
ctcttcagctctgaggaccccttcacagaagaggggagtcaggtagagga
aggggacttgctttaagacacacagtcaatgatctgatgccctggctccc
agtttttcattgccttgagtcacctataaaggttatttcctttttcctct
acttaaagttttcttaagacaggtgtggtgacactcaaccctgtattccc
agcagttctgaggcagaggatagagggtttgaagtcaatttggactacct
agtaaaggacttttgttctcaaaaattgttgtgggggctggagaattgct
cagggctaaatacctgctgccttgcagag
gaattctcttgggcgttctcattagtaagaaaaacacattacaggggcaa
cagggcgtcttcagagctttgactctgcaggaaggagcctctgagtcaga
gcttagcatccaggatgtttatgagggcgtgcctttgaaatggacacctg
tggaagggaagagagggaagcaggcttggggaaggaaacacaagctgtaa
ggaaggccagcagccttagctgacccatgaggctctgaactccactgcct
ctcagcattgccccaaactggactgaggaggctgggcttgtcattgtgtc
gtttgtgtgtgcaagttcgcatgctcatgtgtgcacgtcacatgtaggtt
gggggacctcaggtttgtccttcaggagccattgaccttattgttttgat
ctctgtttttctttggtttttcaagacagggtttcttcttgtagtccagg
ttctcctagaacttgttctgtagaccaggctggcctcagactcagacatc
tctgactgcctctggctcctgagtgctgggattaaaggtgtgggccatca
ccatccagcaaaagttctcaagagacttgttttggcgttttggtttctct
gtgtagaccaggctggccttgagctcaaaaatccacctgtctctgtctcc
caagtgctgggattaaaggcgagtgccactcactcccaccccttagtttt
tgagataggtatctcactggtttggaagtcaccaagtaggataggctggt
tggtcagtgtgtgttgtgagatcatcctgtcttaccattataagcacacg
ctcccacacctgcccttttacatggattctgaggctcaaaaccagaaagc
aagcttgttacccaccaagcctgttccctggccacacctttattcagcta
ttgaatgtgaagggtcctgaagatgagggtaatattccccatgaggctgt
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_75091364_75092444
seq2: B6Ng01-286P10.b_47_1125

seq1  GAATTCCTTATAAACGTTCAATGCTGCAATTTACAAAATACACAGAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATAAACGTTCAATGCTGCAATTTACAAAATACACAGAGACA  50

seq1  TGCCACATACTACTTCCGGGCATCTGGTCCTGGATATCAGACCTTTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACATACTACTTCCGGGCATCTGGTCCTGGATATCAGACCTTTCCTG  100

seq1  AGATCTCAGAAGTTGCAGAGAAGGAAAGATCCATGCTCTGGGGTCAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCAGAAGTTGCAGAGAAGGAAAGATCCATGCTCTGGGGTCAGGCA  150

seq1  TCACCACTTGTTAAGTCCGTATCCCTTACTCTCCACACACAGCCAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACTTGTTAAGTCCGTATCCCTTACTCTCCACACACAGCCAAGGAG  200

seq1  CTAATGACATTGTGACATCACAGGTCCTGAAGTGGAGGCATCTTGCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGACATTGTGACATCACAGGTCCTGAAGTGGAGGCATCTTGCAGGG  250

seq1  TGGCTTGCTCTTCAGTAGCTCTCTGTAACTGAACGCCACACTGGGTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGCTCTTCAGTAGCTCTCTGTAACTGAACGCCACACTGGGTCCTA  300

seq1  AGTACCTCAGGAAGCTGAGCCTAGGGAGGGAAGACTTGAGAAAGCAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTCAGGAAGCTGAGCCTAGGGAGGGAAGACTTGAGAAAGCAGCTG  350

seq1  CTTGTGCAATTAGCCGGCTCCAGGTGGCTGTTCCCTGGCCAGGGACGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCAATTAGCCGGCTCCAGGTGGCTGTTCCCTGGCCAGGGACGCAG  400

seq1  AATGGCAGGCAGCCAGTGCCTCTTACCTTAACCCTTCCTTGTACCAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGGCAGCCAGTGCCTCTTACCTTAACCCTTCCTTGTACCAGAGG  450

seq1  ACAAAGCTTGCTTTGTGAAGAGTATGTCACCCCTGCCTCCATCTCTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTTGCTTTGTGAAGAGTATGTCACCCCTGCCTCCATCTCTCAGT  500

seq1  CTCATGTTTTCCCCTCCCCCAGAGATGACTAGCTAGCTGATAAGCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTTTTCCCCTCCCCCAGAGATGACTAGCTAGCTGATAAGCTCTCT  550

seq1  CTTTCTCCCTCTCTCCCTCCTCCCCTTCAACGTGTCAACTAAGGACCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCCTCTCTCCCTCCTCCCCTTCAACGTGTCAACTAAGGACCCAC  600

seq1  TTGGCAATTTCAGAGCCATGAGGCACCTTAGGCTGTGTTGTCCTAGCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAATTTCAGAGCCATGAGGCACCTTAGGCTGTGTTGTCCTAGCAAC  650

seq1  AGCATCTTTCCACGTGTCCATTCCCAAGGCCCCTATGGTAGACATAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTTTCCACGTGTCCATTCCCAAGGCCCCTATGGTAGACATAGGGT  700

seq1  GGGGCCACTGGATGCATGCTCATGGGCTTCCTACCACCTTCCATCACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCACTGGATGCATGCTCATGGGCTTCCTACCACCTTCCATCACAGC  750

seq1  CTCTTCAGCTCTGAGGACCCCTTCACAGAAGAGGGGAGTCAGGTAGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAGCTCTGAGGACCCCTTCACAGAAGAGGGGAGTCAGGTAGAGGA  800

seq1  AGGGGACTTGCTTTAAGACACACAGTCAATGATCTGATGCCCTGGCTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACTTGCTTTAAGACACACAGTCAATGATCTGATGCCCTGGCTCCC  850

seq1  AGTTTTTCATTGCCTTGAGTCACCTATAAAGGTTATTTCCTTTTTCCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCATTGCCTTGAGTCACCTATAAAGGTTATTTCCTTTTTCCTCT  900

seq1  ACTTAAAGTTT--CTAAGACAGGTGTGGTGACACTCAA-CCTGTATTCCC  947
      |||||||||||   |||||||||||||||||||||||| |||||||||||
seq2  ACTTAAAGTTTTCTTAAGACAGGTGTGGTGACACTCAACCCTGTATTCCC  950

seq1  AGCAGTTCTGAGGCAGGAGGATAGAGGGTTTGAAGTCAATTTGGACTACC  997
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGCAGTTCTGAGGCA-GAGGATAGAGGGTTTGAAGTCAATTTGGACTACC  999

seq1  TAGTAAAGGACTTT--GTCTCAAAAAAATGTTGTGGGGGCTGGAGAAATG  1045
      ||||||||||||||   |||| ||||| ||||||||||||||||| ||| 
seq2  TAGTAAAGGACTTTTGTTCTC-AAAAATTGTTGTGGGGGCTGGAG-AATT  1047

seq1  GCTCAGGGGTTAAAATTACCTGCTGCCCTTGCAGAG  1081
      |||||||| |   || ||||||||| ||||||||||
seq2  GCTCAGGGCT---AAATACCTGCTG-CCTTGCAGAG  1079

seq1: chr9_75271256_75271815
seq2: B6Ng01-286P10.g_69_628 (reverse)

seq1  TGCTGGATGGTGATGGCCCACACCTTTAATCCCAGCACTCAGGAGCCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGATGGTGATGGCCCACACCTTTAATCCCAGCACTCAGGAGCCAGA  50

seq1  GGCAGTCAGAGATGTCTGAGTCTGAGGCCAGCCTGGTCTACAGAACAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCAGAGATGTCTGAGTCTGAGGCCAGCCTGGTCTACAGAACAAGT  100

seq1  TCTAGGAGAACCTGGACTACAAGAAGAAACCCTGTCTTGAAAAACCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGAACCTGGACTACAAGAAGAAACCCTGTCTTGAAAAACCAAAG  150

seq1  AAAAACAGAGATCAAAACAATAAGGTCAATGGCTCCTGAAGGACAAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGAGATCAAAACAATAAGGTCAATGGCTCCTGAAGGACAAACCT  200

seq1  GAGGTCCCCCAACCTACATGTGACGTGCACACATGAGCATGCGAACTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCCCCAACCTACATGTGACGTGCACACATGAGCATGCGAACTTGC  250

seq1  ACACACAAACGACACAATGACAAGCCCAGCCTCCTCAGTCCAGTTTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAACGACACAATGACAAGCCCAGCCTCCTCAGTCCAGTTTGGGG  300

seq1  CAATGCTGAGAGGCAGTGGAGTTCAGAGCCTCATGGGTCAGCTAAGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTGAGAGGCAGTGGAGTTCAGAGCCTCATGGGTCAGCTAAGGCTG  350

seq1  CTGGCCTTCCTTACAGCTTGTGTTTCCTTCCCCAAGCCTGCTTCCCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTCCTTACAGCTTGTGTTTCCTTCCCCAAGCCTGCTTCCCTCTC  400

seq1  TTCCCTTCCACAGGTGTCCATTTCAAAGGCACGCCCTCATAAACATCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCCACAGGTGTCCATTTCAAAGGCACGCCCTCATAAACATCCTG  450

seq1  GATGCTAAGCTCTGACTCAGAGGCTCCTTCCTGCAGAGTCAAAGCTCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAAGCTCTGACTCAGAGGCTCCTTCCTGCAGAGTCAAAGCTCTGA  500

seq1  AGACGCCCTGTTGCCCCTGTAATGTGTTTTTCTTACTAATGAGAACGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCCCTGTTGCCCCTGTAATGTGTTTTTCTTACTAATGAGAACGCCC  550

seq1  AAGAGAATTC  560
      ||||||||||
seq2  AAGAGAATTC  560