BAC Information

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BAC

Clone NameB6Ng01-287K16
Chromosome9 (Build37)
Map Location 16,387,798 - 16,388,914
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc67, LOC665461, LOC330891, Slc36a4, Mtnr1b, Fat3
Downstream geneEG434373, LOC100040074, LOC100040090
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287K16.bB6Ng01-287K16.g
ACCGA085526GA085527
length1,2211,124
definitionB6Ng01-287K16.b B6Ng01-287K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcgtttttcatagctgaatagcattcaactgtgtaaatatacc
acaatttctgtatcctctgttgaaggacatctgaattctttccggcttct
agctattataaataaggctgctataaacatagtgaagcatgtgtccttac
tacatgttggagcatcttctgggtatatgcacaggagtggtatagctggg
ttctcagtagtagtatgtccaattttctgagggactgccaaacttgtttt
cagagtggttgtaccagcttgcaatcccaccagcaatggaggagtgttcc
tctttctccacaaacatgccagcatctactgtcacctgagttttgatctt
agccattctgactggtgtgaggtagaatctcagggttgttctgatttgca
tttcccagatgactaatgatgttgaacatttttttggtgcttctcagcca
ttcagtattcctcagttgagaattctttgtttagctctgtaccccatttt
taatagggttatttggttctctgaagtctaacttcttgagttctttggtt
agtcctctatcagatgtagggttggtaaagatcttttcccaatctgttgg
ttgccattttgtcctattggcagtgttctttgccttacagaagctttgca
attttatgaagtcccatttgtcaattcttgatcttagagcataagctaag
ttctgttcagaaatttttccctgtgcccatgtgctcgaggctcttcccca
ttttcctttttattagtttcagtgtatctggttttataaagaggtccttt
atcaacctggacctgagctttgtacaaggagataagaatggaccaatttt
gcattcttctacatattagccaccagatgagccagcaccatttgctgaaa
atgctgtctttttaaaactgggatagttttaggtcctttgtcaaagatca
agtgacagccacaaataacccaattcaaaatgggatataaaacaaacaca
ttctcaaagcaaaaccaaatggatgagaaatacttaatattcagtacctt
atccacctatgaaatacaaatcaaaattactttgacattcattttataca
agtcatattggctaagtccacaagtaagaacatcttatggcctgaacaag
tggggacaggaacctctattccaattgctatgatcgcggagtgtcccaaa
ctctgtgtttagcaaacaccc

gaattctctaatctaaaaattctgtgcgtggctctgctactgggcacagc
ttcagttgcagagctggaaggaagatgggggtagaagatgaacatatcca
ttgggaaataacagcaggaacacagagtatgtagggactgtcaagtttag
ggcatggatggcctttgcacattaggcaagtctccctggacaatggcagc
tgttgcttacataaatcatcaagatatacaacgccagattcccgtcccta
cacgtcaacacacatcctctttcagctccttcctttgaaatgaagtactt
catgttgaatcagagctatgacagtacttttatctgcgaccttggagaca
atgccaaatgtagcctctatatgcttatccctaaaacgggtaggtaagca
tttactgcctatatgggttctcatttcagtaattaatctgaatgccacat
gaagcttaatatacatacaggccacatacagtttcctataaattaaagca
aggtttctgtttgagaaggataaaaccagcccctaacagcaactatattt
atatgtatatttgcacactcttattcatggcctggtatttatttatttat
tatatttttttactttacaattttttattagatactttctttatttacat
ttcaaatgttatcccctttcttagttttcccgctgaaaatcccctcccac
tccccaacccacccactcccatttcctggtcctggaaaccccttatactg
gggatagaaccttcacaggaccaagaatggcctggtatttaagtgtgtga
taaatatagtttattctgataatggggatgatggggagtggcagctttct
tacagagatgttatataaatcccctttccattgaagagctcccgctgggg
agaaaggaagcaactcagcaaggaaagaaaacattcacatctcaggttcc
tcttggggaaagattccacggccctcatcaagctgtacaagtcgaaacaa
tttctggataactctctggtcttcttgggtgctgcctatacaggtgcaga
gagctcctgggtgcactcttctgagtcataccaaagctggaaggtgaaga
tttggtgatggatggagctgcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_16387798_16388914
seq2: B6Ng01-287K16.g_69_1192

seq1  GAATTCTCTAATCTAAAAATTCTGTGCGTGGCTCTGCTACTGGGCACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATCTAAAAATTCTGTGCGTGGCTCTGCTACTGGGCACAGC  50

seq1  TTCAGTTGCAGAGCTGGAAGGAAGATGGGGGTAGAAGATGAACATATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTGCAGAGCTGGAAGGAAGATGGGGGTAGAAGATGAACATATCCA  100

seq1  TTGGGAAATAACAGCAGGAACACAGAGTATGTAGGGACTGTCAAGTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAATAACAGCAGGAACACAGAGTATGTAGGGACTGTCAAGTTTAG  150

seq1  GGCATGGATGGCCTTTGCACATTAGGCAAGTCTCCCTGGACAATGGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGATGGCCTTTGCACATTAGGCAAGTCTCCCTGGACAATGGCAGC  200

seq1  TGTTGCTTACATAAATCATCAAGATATACAACGCCAGATTCCCGTCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTACATAAATCATCAAGATATACAACGCCAGATTCCCGTCCCTA  250

seq1  CACGTCAACACACATCCTCTTTCAGCTCCTTCCTTTGAAATGAAGTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCAACACACATCCTCTTTCAGCTCCTTCCTTTGAAATGAAGTACTT  300

seq1  CATGTTGAATCAGAGCTATGACAGTACTTTTATCTGCGACCTTGGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGAATCAGAGCTATGACAGTACTTTTATCTGCGACCTTGGAGACA  350

seq1  ATGCCAAATGTAGCCTCTATATGCTTATCCCTAAAACGGGTAGGTAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAATGTAGCCTCTATATGCTTATCCCTAAAACGGGTAGGTAAGCA  400

seq1  TTTACTGCCTATATGGGTTCTCATTTCAGTAATTAATCTGAATGCCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGCCTATATGGGTTCTCATTTCAGTAATTAATCTGAATGCCACAT  450

seq1  GAAGCTTAATATACATACAGGCCACATACAGTTTCCTATAAATTAAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTAATATACATACAGGCCACATACAGTTTCCTATAAATTAAAGCA  500

seq1  AGGTTTCTGTTTGAGAAGGATAAAACCAGCCCCTAACAGCAACTATATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTGTTTGAGAAGGATAAAACCAGCCCCTAACAGCAACTATATTT  550

seq1  ATATGTATATTTGCACACTCTTATTCATGGCCTGGTATTTATTTATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATATTTGCACACTCTTATTCATGGCCTGGTATTTATTTATTTAT  600

seq1  TATATTTTTTTACTTTACAATTTTTTATTAGATACTTTCTTTATTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTTTACTTTACAATTTTTTATTAGATACTTTCTTTATTTACAT  650

seq1  TTCAAATGTTATCCCCTTTCTTAGTTTTCCCGCTGAAAATCCCCTCCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGTTATCCCCTTTCTTAGTTTTCCCGCTGAAAATCCCCTCCCAC  700

seq1  TCCCCAACCCACCCACTCCCA-TTCCTGGTCCTGGAAACCCCTTATACTG  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCCCAACCCACCCACTCCCATTTCCTGGTCCTGGAAACCCCTTATACTG  750

seq1  GGGATAGAACCTTCACAGGACCAAGAATGGCCTGGTATTTAAGTGTGTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGAACCTTCACAGGACCAAGAATGGCCTGGTATTTAAGTGTGTGA  800

seq1  TAAATATAGTTTATTCTGATAATGGGGATGAT-GGGAGTGGCAGCTTTCT  848
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAAATATAGTTTATTCTGATAATGGGGATGATGGGGAGTGGCAGCTTTCT  850

seq1  TACAGAGATGTTATATAAAT-CCCTTTCCATTGAAGAGCTCCCGCT-GGG  896
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  TACAGAGATGTTATATAAATCCCCTTTCCATTGAAGAGCTCCCGCTGGGG  900

seq1  AGAAAGGAAGCAACTCAGCAAGGAAAG-AAACATTCCACATCTCAGGTT-  944
      ||||||||||||||||||||||||||| ||||||| ||||||||||||| 
seq2  AGAAAGGAAGCAACTCAGCAAGGAAAGAAAACATT-CACATCTCAGGTTC  949

seq1  CTCTT-GGGAAAGA-TCCACGGGCCCTCATCAAAGCTGTACAAGTCGAAA  992
      ||||| |||||||| ||||| |||||||||| ||||||||||||||||||
seq2  CTCTTGGGGAAAGATTCCAC-GGCCCTCATC-AAGCTGTACAAGTCGAAA  997

seq1  CAATTTCTGGATAAACTCTCTGGTCTTCTTGGGTGCTGCCTATACAAGGT  1042
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  CAATTTCTGGAT-AACTCTCTGGTCTTCTTGGGTGCTGCCTATAC-AGGT  1045

seq1  GCAGAGAGCT-CTGGGTGCCACCTTCTGAGTCATACCCAAAGCTGGA--G  1089
      |||||||||| ||||||||   ||||||||||||| |||||||||||  |
seq2  GCAGAGAGCTCCTGGGTGCACTCTTCTGAGTCATA-CCAAAGCTGGAAGG  1094

seq1  TG-AGATTT-GTGAT-GATGGAGCTGGCTTG  1117
      || |||||| ||||| ||||||||| |||||
seq2  TGAAGATTTGGTGATGGATGGAGCT-GCTTG  1124


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