MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-289E11
Chromosome	9 (Build37)
Map Location	11,325,069 - 11,326,215
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC665178
Downstream gene	LOC100039989, LOC622505
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665178 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665178
definition	note : CD2-associated protein pseudogene pseudo : _no_value

name	LOC100039989 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs

name	LOC622505 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039989 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259459 GeneID:100039989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs product : similar to gag polyprotein transcript_id : XM_001473790.1

name	LOC100039989 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259460 GeneID:100039989
definition	codon_start : 1 product : similar to gag polyprotein protein_id : XP_001473840.1

name	LOC622505 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622505
definition	number : 1 pseudo : _no_value

name	LOC622505 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622505
definition	number : 2 pseudo : _no_value

name	LOC665178 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	note : clone_boundary; clone_end:T7; site:EcoRI pseudo : _no_value

name	(CDS detail)
type	misc_feature
link
xref
definition	note : wgs_end_extension; clone_end:T7

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

clone name	MSMg01-092B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-289E11.b	B6Ng01-289E11.g
ACC	GA086726	GA086727
length	1,240	1,149
definition	B6Ng01-289E11.b	B6Ng01-289E11.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcagaacttttcagctggggaacggtggataccagtaagtatagct ttacgaggtacgcctggccttgaactttctaacgaaattcaagacagtct atcagaagtaaagtggggaatagctttacaaggtacgcctggccttgaac tttctaacgaaattcaggacagtctatcagaagtaaagtggaaaatggct ttacgaggtatgcttggccttaaactttctctagtgttagaagccctttt gttccttttcacatgttatcaagtgattaaggcagggctaaaaattctag atgaaattcaggacaatctatcagaagtaaagcggggagagagagtagga gcaaagagaaaatatggttcacaaaataagtatacaggcctttccaaggg tcttgaacctgaggaaaagtttaggtcaggtaagaatacctggggagaga ttagaaggaaggagaaggaaaaagaaaagaaaaaagatcaatcagcggag gcttctaagagaaggagcctatactcatcactagatgagctcaaggagcc agtttttagtagttctgaatcaaatgaaaaggctattagggcctggaagg cgctctcccgagcaggtgaagccactggacaataatgacagaggcaggct cttgcagcctacaaggtcttattgtctaccctggagttgtagatcagaat tgtaaaggggaacttcaggttctctgttcttgtcctcaagttgtcttttc tatatcacaaagggacagaatagctcaactaataataattttgccaagcc tacatggctgttttttcttcttctggtattccttgagctgccagagggat tggttctactgaaagtgattctgattacttaataatgcctttagattgtt gtcaaattttatctactcacgtaggggtaaaccctcgtggcgtcaggcca ttacaggtctgacagatggatgtcacgcattattttcctcctttgagaga aatcaataatttacatgttttagaatagaaaggagaatccaccttccata cccttaaatgattttccaaaaggctgttgggggagaaaaattaatttggg cttaagaccattttttaagagattcctttcccccgtggagttaaggagtt tgttgtagtaattttagaagggaaatcctcaaatatctccttccttaggg aacctcctaacctacatgagcttgtgtcgtatactccacg	gaattcagtgtgttttgataaaacacaaaaataaaaattgtggctaggtc gacactaagagacgattattgccgactttaacttaacatgactccataat ctaacaggaaaagttaaatctaaagtgcattagatatatatactaagtat ttgataaatggatttttgccaaataatttatttaaatattctctaaagca acaatgacaacctgcaatggggttcttgttttgaaaataatatgttgaat atcagagtggggatgtgtactgctggttcatgctctaatattctgaagta aatgacaaagcatttactcagagagaacatttttttattacaaagatatt ctactgagacaatatataagtgatactattgaacaacttcacgaagtatt agagaatagaagtatatactctatggtttgtgtttcaagggtattgtcta agagaaatctgactagtcaaaaattgtacatattatctttaaaaatggta aaacaagtacaaagggaagaaaatagcatggatttcatttggattttaga aagatgtctgtacctttagggaaagaaagaataagaagaagtaaaataaa atattgaagtattttatagattattattattattattttctctactaagt gattgttaggttgtcagacagcccctagatgtagaactaacactaatttc ctgttcttaagtgagatagaagagtcatctcactgtggggcacttcaaag ctgtaagccttgtgtcccaaagaatgtgttaattatgatgtcacagatga agttgttagttttgatgtctgcttagtagaacacacatggtgtagtttag cataatatatgtacagggagttactgccacatcactagaaataacctcat ctgcccgtattagcctctttactgttactatgataaaacgtccatagaaa gaggctatgggagaaagggttagtgttgactcacaattccaggagagata taggtctataatgacaagaaagacctggaaaccaaaaactggtggtgcta gcagacagtggaggatcaggaggtataggctgtttaggccaggttataac acttcaagtacctcaatggatggcctttatcagaattctctaccttcaa
quality values	Open. Hide. 58 22 25 32 58 26 18 33 58 62 52 54 62 62 62 38 28 62 62 62 62 62 62 62 47 62 41 62 62 56 62 56 15 20 32 44 28 29 34 44 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 59 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 36 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 47 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 58 58 58 58 58 58 58 54 35 58 58 58 58 58 58 54 58 54 58 42 58 58 42 58 58 50 58 58 58 58 58 58 58 58 58 47 58 54 54 54 58 58 58 58 54 58 58 58 58 58 58 35 52 54 58 54 52 58 58 42 54 54 58 58 58 52 58 54 54 54 52 54 54 48 58 58 58 41 51 58 54 42 58 58 58 49 58 58 58 50 58 27 58 53 53 58 51 47 58 46 45 58 51 49 49 58 37 23 49 31 54 58 58 53 53 54 58 58 50 51 27 58 50 25 49 48 58 58 51 40 40 44 32 54 50 58 58 51 42 35 58 50 42 48 50 58 51 46 46 50 58 24 58 50 46 37 58 37 58 50 50 44 49 51 52 39 51 58 50 50 50 40 50 28 58 41 52 51 51 53 40 51 54 35 54 52 42 42 31 58 47 39 43 58 34 54 50 49 32 45 39 41 37 38 45 42 51 40 27 51 52 42 51 54 51 27 49 49 41 51 40 35 53 53 38 29 25 54 37 52 42 41 45 52 51 52 40 42 45 51 54 33 38 46 41 42 26 33 37 42 39 52 32 37 51 54 36 42 45 40 53 52 37 53 41 41 31 19 44 41 23 54 44 33 29 32 41 49 34 42 52 31 52 53 39 29 41 52 41 21 53 53 34 42 52 30 27 53 53 49 53 28 22 45 26 34 35 34 47 31 35 30 25 31 32 46 30 31 51 31 51 51 51 51 42 42 30 31 42 26 45 31 31 42 51 26 31 31 42 35 37 33 31 42 33 29 31 32 32 31 43 28 36 36 9 47 34 21 17 41 38 41 31 31 43 34 34 43 30 31 31 47 37 28 31 31 30 21 31 31 27 30 28 19 27 30 31 30 32 29 33 25 27 30 31 43 28 35 18 37 31 30 30 31 25 33 34 33 31 28 30 36 23 46 29 30 48 48 35 12 16 25 25 21 21 37 35 24 35 32 31 26 18 48 44 31 26 31 44 26 19 41 32 27 34 21 18 31 31 21 33 32 31 16 18 26 11 17 15 31 32 23 30 14 26 33 24 27 24 25 33 16 15 16 34 28 34 34 32 31 34 32 28 23 16 15 23 18 17 7 9 18 37 43 10 22 13 19 23 25 10 27 25 7 11 9 24 8 17 38 28 14 13 24 9 10 6 6 5 30 21 5 8 11 10 10 7 27 28 7 7 5 16 7 6 10 3 12 19 12 6 7 7 3 3 10 13 9 8 7 27 27 8 9 19 27 10 14 12 18 11 6 5 4 20 28 18 12 5 12 11 28 32 22 6 7 11 28 29 25 6 6 21 10 7 6 7 8 12 30 18 5 6 4 6 10 8 4 8 5 21 5 10 4 10 6 5 20 6 6 8 12 9 15 5 11 7 12 5 16 8 28 28 28 8 2 6 5 8 7 13 5 7 18 11 7 8 12 5 14 10 4 5 4 7 9 9 16 4 5 4 4 5 9 1 1 1 2 16 8 14 3 3 1 6 8 7 2 13 4 6 7 30 16 7 5 8 5 3 5 4 4 3 11 9 25 13 5 21 4 3 3 5 7 4 7 5 20 4 4 4 9 3 4 8 8 19 8 5 5 5 4 5 7 8 12 12 4 5 3 2 3 4 6 6 14 7 8 6 22 8 7 6 4 3 5 15 5 18 8 5 8 5 2 6 6 5 5 14	Open. Hide. 62 35 56 42 62 44 38 56 62 62 42 59 45 32 32 32 38 29 50 45 50 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 59 59 62 62 62 62 62 59 62 62 59 59 62 62 59 54 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 49 58 58 58 58 58 58 58 45 54 58 58 54 46 58 58 58 58 58 58 49 58 58 54 46 49 58 58 58 58 46 41 58 54 54 58 58 58 46 58 58 54 58 58 50 41 58 58 54 58 58 51 58 58 58 49 58 48 50 54 58 50 58 47 47 58 51 50 58 50 58 58 58 53 41 58 58 49 51 52 51 58 58 58 58 48 58 50 49 58 58 51 49 58 43 44 49 38 48 52 41 58 51 38 39 52 41 38 48 49 47 53 51 58 58 58 58 58 58 51 50 49 50 50 51 50 52 58 41 31 58 51 28 52 53 39 54 41 52 58 32 52 38 42 54 32 42 53 51 14 14 33 40 49 39 39 31 54 39 49 35 38 41 32 47 35 47 39 53 49 41 32 49 50 54 35 35 49 41 54 38 46 53 41 53 31 53 42 45 51 53 42 53 40 45 37 35 34 32 54 29 40 37 31 52 40 54 40 34 37 45 47 31 37 53 54 40 30 32 31 52 53 43 41 49 41 32 42 45 52 32 32 39 32 41 40 31 53 52 47 51 41 30 52 40 31 52 53 34 44 53 36 51 42 51 31 34 36 36 42 45 30 32 31 42 31 42 34 34 25 32 32 34 38 39 31 31 33 31 33 34 42 41 39 31 35 42 48 48 31 30 31 28 31 31 38 30 42 36 43 32 31 22 25 25 31 35 32 33 27 31 30 33 24 31 30 46 28 46 36 42 19 24 46 27 31 19 31 35 43 29 31 32 38 31 27 32 39 36 31 32 22 19 48 33 10 19 23 31 20 31 31 41 22 30 31 38 30 31 37 31 21 28 27 33 31 41 26 19 21 26 21 21 26 30 24 38 31 25 32 28 44 31 23 32 34 32 33 31 18 30 30 31 33 31 48 31 24 34 24 31 11 24 18 32 32 32 32 31 31 10 15 43 39 23 9 4 12 20 32 15 32 22 11 24 48 24 30 31 10 24 32 33 21 22 28 48 15 6 15 25 43 15 11 47 25 7 21 21 6 17 29 13 22 27 28 24 27 18 17 17 11 14 21 18 14 21 15 13 7 13 8 18 18 16 8 7 18 16 11 10 18 16 18 16 7 7 26 10 26 24 16 10 17 10 18 34 19 17 25 5 11 15 11 8 18 28 14 10 8 9 28 25 32 11 10 10 20 7 6 22 16 8 18 21 20 16 6 3 2 5 12 5 4 13 6 5 7 22 9 17 3 3 10 6 2 2 5 7 15 14 21 7 15 10 11 13 13 21 6 13 16 18 7 4 16 11 14 11 16 11 7 5 5 11 10 4 4 3 2 4 10 10 11 12 15 11 16 5 5 10 8 7 4 5 7 21 10 20 26 7 6 7 17 5 4 12 3 1 1 6 3 3 1 1 4 6 9 4 8 16 8 15 6 3 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_11325069_11326215
seq2: B6Ng01-289E11.g_69_1217 (reverse)

seq1  TTGAAGGTAGAGAATTTCTGAATAAAGCCAT-CATTGA-GTACTTTGAAG  48
      |||||||||||||| ||||||  || ||||| |||||| |||| ||||||
seq2  TTGAAGGTAGAGAA-TTCTGATAAAGGCCATCCATTGAGGTAC-TTGAAG  48

seq1  TGTTATAACCTGG-CTTAACAGCCTATTACCTCTCTGATTCCTCACTGTC  97
      ||||||||||||| || ||||||||| |||||| ||||| |  |||||||
seq2  TGTTATAACCTGGCCTAAACAGCCTA-TACCTC-CTGATCCTCCACTGTC  96

seq1  TGGCTAGCACCA-CAG-TTTTGGTTT-CAGGTCTTTCTTGTCATTATAGA  144
      | |||||||||| ||| ||||||||| |||||||||||||||||||||||
seq2  T-GCTAGCACCACCAGTTTTTGGTTTCCAGGTCTTTCTTGTCATTATAGA  145

seq1  -CTATATCTCT-CTGGAATTGTGAGTCAACACTAACCCTTTCTCCCATAG  192
       |||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTATATCTCTCCTGGAATTGTGAGTCAACACTAACCCTTTCTCCCATAG  195

seq1  CCTCTTTCTATGGACGGTTTTATCATAGTAACAGTAAAGAGGCTAATACG  242
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCTTTCTATGGAC-GTTTTATCATAGTAACAGTAAAGAGGCTAATACG  244

seq1  GGCAGATGAGGTTATTTCTAGTGATGTGGCAGTAACTCCCTGTACATATA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATGAGGTTATTTCTAGTGATGTGGCAGTAACTCCCTGTACATATA  294

seq1  TTATGCTAAACTACACCATGTGTGTTCTACTAAGCAGACATCAAAACTAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTAAACTACACCATGTGTGTTCTACTAAGCAGACATCAAAACTAA  344

seq1  CAACTTCATCTGTGACATCATAATTAACACATTCTTTGGGACACAAGGCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCATCTGTGACATCATAATTAACACATTCTTTGGGACACAAGGCT  394

seq1  TACAGCTTTGAAGTGCCCCACAGTGAGATGACTCTTCTATCTCACTTAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTTTGAAGTGCCCCACAGTGAGATGACTCTTCTATCTCACTTAAG  444

seq1  AACAGGAAATTAGTGTTAGTTCTACATCTAGGGGCTGTCTGACAACCTAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGAAATTAGTGTTAGTTCTACATCTAGGGGCTGTCTGACAACCTAA  494

seq1  CAATCACTTAGTAGAGAAAATAATAATAATAATAATCTATAAAATACTTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACTTAGTAGAGAAAATAATAATAATAATAATCTATAAAATACTTC  544

seq1  AATATTTTATTTTACTTCTTCTTATTCTTTCTTTCCCTAAAGGTACAGAC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTATTTTACTTCTTCTTATTCTTTCTTTCCCTAAAGGTACAGAC  594

seq1  ATCTTTCTAAAATCCAAATGAAATCCATGCTATTTTCTTCCCTTTGTACT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTAAAATCCAAATGAAATCCATGCTATTTTCTTCCCTTTGTACT  644

seq1  TGTTTTACCATTTTTAAAGATAATATGTACAATTTTTGACTAGTCAGATT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACCATTTTTAAAGATAATATGTACAATTTTTGACTAGTCAGATT  694

seq1  TCTCTTAGACAATACCCTTGAAACACAAACCATAGAGTATATACTTCTAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAGACAATACCCTTGAAACACAAACCATAGAGTATATACTTCTAT  744

seq1  TCTCTAATACTTCGTGAAGTTGTTCAATAGTATCACTTATATATTGTCTC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAATACTTCGTGAAGTTGTTCAATAGTATCACTTATATATTGTCTC  794

seq1  AGTAGAATATCTTTGTAATAAAAAAATGTTCTCTCTGAGTAAATGCTTTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAATATCTTTGTAATAAAAAAATGTTCTCTCTGAGTAAATGCTTTG  844

seq1  TCATTTACTTCAGAATATTAGAGCATGAACCAGCAGTACACATCCCCACT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTACTTCAGAATATTAGAGCATGAACCAGCAGTACACATCCCCACT  894

seq1  CTGATATTCAACATATTATTTTCAAAACAAGAACCCCATTGCAGGTTGTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATTCAACATATTATTTTCAAAACAAGAACCCCATTGCAGGTTGTC  944

seq1  ATTGTTGCTTTAGAGAATATTTAAATAAATTATTTGGCAAAAATCCATTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGCTTTAGAGAATATTTAAATAAATTATTTGGCAAAAATCCATTT  994

seq1  ATCAAATACTTAGTATATATATCTAATGCACTTTAGATTTAACTTTTCCT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATACTTAGTATATATATCTAATGCACTTTAGATTTAACTTTTCCT  1044

seq1  GTTAGATTATGGAGTCATGTTAAGTTAAAGTCGGCAATAATCGTCTCTTA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATTATGGAGTCATGTTAAGTTAAAGTCGGCAATAATCGTCTCTTA  1094

seq1  GTGTCGACCTAGCCACAATTTTTATTTTTGTGTTTTATCAAAACACACTG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCGACCTAGCCACAATTTTTATTTTTGTGTTTTATCAAAACACACTG  1144

seq1  AATTC  1147
      |||||
seq2  AATTC  1149

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information