BAC Information

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BAC

Clone NameB6Ng01-291F10
Chromosome9 (Build37)
Map Location 38,074,862 - 38,075,993
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143
Downstream geneOlfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291F10.bB6Ng01-291F10.g
ACCGA088253GA088254
length1,0671,126
definitionB6Ng01-291F10.b B6Ng01-291F10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttagctctctaccccatttttaatagggttatttggttctctg
gagtctaacttcttgagttctttgtacatactggatatcagccctctatc
aggtattgggttggtaaagatattttcccaatctgttggttgtcgttttg
tcctattgactgtgtcctttgacttacagaagctttgtaattttatgacg
tcccatttgtctattgttgatcatagagtataatccattggtgttctggt
tagaaaatttctccttgtgtccatgtgttggaggctttcccctacttgtt
cttctgttggattcagtgtatctggttttatgtggaggttcttgatccac
ttggacttgtgctttgtacatggacataataatagatcaatttgtatttt
tctaaatgttgactgccagttgaactcagctccatttgttgtaaaggctg
tcattttttatgttggatggttttagctcctttgtcaaaaatcaagtgac
cataggtgtgtgggttcatttctgcatcttcaattctgttccattgatct
acctgtctgtcactgtaccagtaccatgcagtttttatcacaattgctct
gtagtacagtttgaggtcaggcatggtgattccaccagggttcttttatt
tttgagaatagtatttgatatcctgggttttcgttattccaaatgaattt
gagaattgctctttctaactctatgaagaattgagttggaatttttgatg
gggattgaattcaatctgtagattgcttttggcaagatgtccatttttgt
ctatattaaatcctgccaacacatgagcataagagaactttccatctttt
gagaccttcttcaattttgttttttcagagatttgaaatttctttgtcat
acagatatttcaatttgctgtggctagagtctcaccaagttattttatag
tttgtgaaagggtgtccttttcctaatttctttctcaacctgtttatgct
ttgagttataggtaaggctactgatttgttagagcttattttcattccag
cccactttgctgaagct
gaattcctatttcctctctcctcttccatcttgtgtataacacttcagaa
agatgctggggaaccttaatttcctcaaataaaatatctttcctttcttc
tagtgtttactaacatttaaggctgaaaagtgcagtgcatgcactttttt
cagaatttatgatttatatagcagtgggaatgaagacaaaaatgtcaaaa
taaagattatccagtgctcaccttgattcatctggagccttccctgacat
cggagttcatggtatcttcctgttcgctgtgcacagagggcccaagttgt
taataatgaagcaggtaattgcaatcagtgcagaaaatgtacctcacttg
ctacaagaagttcccttgggaaaatgtcatggttactctttgacaaagat
tcttttactcatacaaaaaaagaaaatagttttcttatttgaatcttcaa
agcctcaaggtcaagatttttgagaaaatttattagaattatagaaaaga
attctcttctttaagatactttccatgttggatgagtcccttgagggtta
aattgttgctattgtaccagagaactaacatcagtcctttagagattcaa
cattctactcaatttataattttccagcaggagtatctggtccccagagt
agaagtgtgagttggccagtttgttattctcttcattaagttctgcaaca
gctctgcaagaggaaatgtccagggacacactcactttccatttgtagtt
ttcatatgattacattaataaactgttgaccaaggattaatattgtacaa
aaatatttgaagaaaggggataaaagattttaaacaggctctcatgtttt
tcttaattaacattaaagcttttcattcctaggcttgtcattgtttgttt
acatgtgaatattcttatgaataaatgtaaaataaattcataaatatggg
cttacattttgaactactagtaaagttcatggttatcatacagaaatttc
tgggtacattttgcagaaaataacaaattcaaatgccacaattataaaat
atatcattgagaaaatttatcaggtatatcagaaggttactatggaaaat
tacctagtatgtttagtctctacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38074862_38075993
seq2: B6Ng01-291F10.g_66_1191 (reverse)

seq1  AGTGTAAGAGGACTAACACATACTAGTATATTTTCATAAGTAACTTTCTG  50
      ||||| ||| |||||| |||||||||   ||||||   |||||| |||||
seq2  AGTGT-AGA-GACTAA-ACATACTAGGTAATTTTCCATAGTAACCTTCTG  47

seq1  ATATACTGTATAAATTTTCTCAAAATGAATAATATTTTAT-ATTGT-GCA  98
      ||||||   ||||||||||||  |||||   ||||||||| ||||| |||
seq2  ATATACCTGATAAATTTTCTC--AATGA--TATATTTTATAATTGTGGCA  93

seq1  TTTGAATTTGTTATTTTCTGCAAAATTGTACCCAGAAATTTCTGTATGAT  148
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTGAATTTGTTATTTTCTGCAAAA-TGTACCCAGAAATTTCTGTATGAT  142

seq1  AACCATGAACTTTACTAGTAGTTCAAAATGTAAGCCCATATTTATGAATT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGAACTTTACTAGTAGTTCAAAATGTAAGCCCATATTTATGAATT  192

seq1  TATTTTACATTTATTCATAAGAATATTCACATGTAAACAAACAATGACAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTACATTTATTCATAAGAATATTCACATGTAAACAAACAATGACAA  242

seq1  GCCTAGGAATGAAAAGCTTTAATGTTAATTAAGAAAAACATGAGAGCCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGAATGAAAAGCTTTAATGTTAATTAAGAAAAACATGAGAGCCTG  292

seq1  TTTAAAATCTTTTATCCCCTTTCTTCAAATATTTTTGTACAATATTAATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATCTTTTATCCCCTTTCTTCAAATATTTTTGTACAATATTAATC  342

seq1  CTTGGTCAACAGTTTATTAATGTAATCATATGAAAACTACAAATGGAAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCAACAGTTTATTAATGTAATCATATGAAAACTACAAATGGAAAG  392

seq1  TGAGTGTGTCCCTGGACATTTCCTCTTGCAGAGCTGTTGCAGAACTTAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTGTCCCTGGACATTTCCTCTTGCAGAGCTGTTGCAGAACTTAAT  442

seq1  GAAGAGAATAACAAACTGGCCAACTCACACTTCTACTCTGGGGACCAGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAATAACAAACTGGCCAACTCACACTTCTACTCTGGGGACCAGAT  492

seq1  ACTCCTGCTGGAAAATTATAAATTGAGTAGAATGTTGAATCTCTAAAGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGCTGGAAAATTATAAATTGAGTAGAATGTTGAATCTCTAAAGGA  542

seq1  CTGATGTTAGTTCTCTGGTACAATAGCAACAATTTAACCCTCAAGGGACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTTAGTTCTCTGGTACAATAGCAACAATTTAACCCTCAAGGGACT  592

seq1  CATCCAACATGGAAAGTATCTTAAAGAAGAGAATTCTTTTCTATAATTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAACATGGAAAGTATCTTAAAGAAGAGAATTCTTTTCTATAATTCT  642

seq1  AATAAATTTTCTCAAAAATCTTGACCTTGAGGCTTTGAAGATTCAAATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTTTCTCAAAAATCTTGACCTTGAGGCTTTGAAGATTCAAATAA  692

seq1  GAAAACTATTTTCTTTTTTTGTATGAGTAAAAGAATCTTTGTCAAAGAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTATTTTCTTTTTTTGTATGAGTAAAAGAATCTTTGTCAAAGAGT  742

seq1  AACCATGACATTTTCCCAAGGGAACTTCTTGTAGCAAGTGAGGTACATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGACATTTTCCCAAGGGAACTTCTTGTAGCAAGTGAGGTACATTT  792

seq1  TCTGCACTGATTGCAATTACCTGCTTCATTATTAACAACTTGGGCCCTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTGATTGCAATTACCTGCTTCATTATTAACAACTTGGGCCCTCT  842

seq1  GTGCACAGCGAACAGGAAGATACCATGAACTCCGATGTCAGGGAAGGCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAGCGAACAGGAAGATACCATGAACTCCGATGTCAGGGAAGGCTC  892

seq1  CAGATGAATCAAGGTGAGCACTGGATAATCTTTATTTTGACATTTTTGTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAATCAAGGTGAGCACTGGATAATCTTTATTTTGACATTTTTGTC  942

seq1  TTCATTCCCACTGCTATATAAATCATAAATTCTGAAAAAAGTGCATGCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCCCACTGCTATATAAATCATAAATTCTGAAAAAAGTGCATGCAC  992

seq1  TGCACTTTTCAGCCTTAAATGTTAGTAAACACTAGAAGAAAGGAAAGATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTTTCAGCCTTAAATGTTAGTAAACACTAGAAGAAAGGAAAGATA  1042

seq1  TTTTATTTGAGGAAATTAAGGTTCCCCAGCATCTTTCTGAAGTGTTATAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGAGGAAATTAAGGTTCCCCAGCATCTTTCTGAAGTGTTATAC  1092

seq1  ACAAGATGGAAGAGGAGAGAGGAAATAGGAATTC  1132
      ||||||||||||||||||||||||||||||||||
seq2  ACAAGATGGAAGAGGAGAGAGGAAATAGGAATTC  1126