MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-292P16
Chromosome	9 (Build37)
Map Location	41,401,208 - 41,518,178
singlet/doublet	doublet
Overlap gene	LOC100042464, EG667566
Upstream gene	9030425E11Rik, LOC100043076, LOC100043071, Hspa8, Bsx, 4931429I11Rik, Crtam, 2810457I06Rik, LOC628495
Downstream gene	6720432D03Rik, Sorl1, Sc5d, Tecta, Tbcel, Grik4
Link	Open Mouse BAC browser

Click to get alignment info.

name	9030425E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71566 MGI:1918816
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043076 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043071 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Hspa8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15481 MGI:105384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bsx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244813 MGI:2669849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931429I11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70989 MGI:1918239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crtam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54698 MGI:1859822
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810457I06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72828 MGI:1920078
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC628495 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628495
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042464 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667566 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667566 MGI:3643201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	6720432D03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77740 MGI:1924990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Sorl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20660 MGI:1202296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sc5d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235293 MGI:1353611
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tecta (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21683 MGI:109575
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbcel (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:272589 MGI:1925543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grik4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110637 MGI:95817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030425E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370518 GeneID:71566 MGI:1918816
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030425E11 gene transcript_id : NM_133733.3

name	LOC100043076 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259943 GeneID:100043076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043076 transcript_id : XM_001479085.1

name	LOC100043071 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259941 GeneID:100043071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043071 transcript_id : XM_001479079.1

name	Hspa8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681696 GeneID:15481 MGI:105384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 8 transcript_id : NM_031165.4

name	Bsx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130559 GeneID:244813 MGI:2669849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brain specific homeobox transcript_id : NM_178245.3

name	4931429I11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487448 GeneID:70989 MGI:1918239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931429I11 gene transcript_id : NM_001081121.1

name	Crtam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119360369 GeneID:54698 MGI:1859822
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytotoxic and regulatory T cell molecule transcript_id : NM_019465.2

name	2810457I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375611 GeneID:72828 MGI:1920078
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810457I06 gene transcript_id : NM_176860.4

name	LOC100042464 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259901 GeneID:100042464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042464 transcript_id : XM_001478267.1

name	6720432D03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259905 GeneID:77740 MGI:1924990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 6720432D03 gene transcript_id : XM_001478273.1

name	Sorl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372316 GeneID:20660 MGI:1202296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sortilin-related receptor, LDLR class A repeats-containing transcript_id : NM_011436.3

name	Sc5d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27777692 GeneID:235293 MGI:1353611
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae) transcript_id : NM_172769.1

name	Tecta (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678276 GeneID:21683 MGI:109575
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tectorin alpha transcript_id : NM_009347.1

name	Tbcel (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803037 GeneID:272589 MGI:1925543
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin folding cofactor E-like transcript_id : NM_173038.2

name	Grik4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802216 GeneID:110637 MGI:95817
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, kainate 4 transcript_id : NM_175481.3

name	9030425E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542035 CCDS:CCDS23082.1 GeneID:71566 MGI:1918816
definition	codon_start : 1 note : adipocyte adhesion molecule; CAR-like membrane protein; adipocyte-specific protein 5 product : adipocyte-specific adhesion molecule protein_id : NP_598494.2

name	LOC100043076 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259944 GeneID:100043076
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479135.1

name	LOC100043071 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259942 GeneID:100043071
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479129.1

name	Hspa8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981690 CCDS:CCDS23083.1 GeneID:15481 MGI:105384
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0042623 - ATPase activity, coupled [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051082 - unfolded protein binding [Evidence IPI] GO_process : GO:0051085 - chaperone cofactor-dependent protein folding [Evidence IGI]; GO:0006457 - protein folding [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IDA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock protein cognate 70; heat shock 70kD protein 8; heat shock cognate hsc73 product : heat shock protein 8 protein_id : NP_112442.2

name	Bsx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30142687 CCDS:CCDS23084.1 GeneID:244813 MGI:2669849
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence ISS] GO_process : GO:0007420 - brain development [Evidence ISS]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : brain specific homeobox protein_id : NP_839976.1

name	4931429I11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487449 GeneID:70989 MGI:1918239
definition	codon_start : 1 product : hypothetical protein LOC70989 protein_id : NP_001074590.1

name	Crtam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119360370 GeneID:54698 MGI:1859822
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : class I-restricted T cell-associated molecule product : cytotoxic and regulatory T cell molecule protein_id : NP_062338.2

name	2810457I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28849905 CCDS:CCDS23085.1 GeneID:72828 MGI:1920078
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : RIKEN cDNA 2810457I06 protein_id : NP_789830.1

name	LOC100042464 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259902 GeneID:100042464
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478317.1

name	6720432D03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259906 GeneID:77740 MGI:1924990
definition	codon_start : 1 product : hypothetical protein LOC77740 protein_id : XP_001478323.1

name	Sorl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625645 GeneID:20660 MGI:1202296
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0008565 - protein transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006897 - endocytosis [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : sortilin-related receptor, LDLR class A repeats-containing protein_id : NP_035566.2

name	Sc5d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777693 CCDS:CCDS23086.1 GeneID:235293 MGI:1353611
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 product : sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog protein_id : NP_766357.1

name	Tecta (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678277 CCDS:CCDS23087.1 GeneID:21683 MGI:109575
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IDA] [Evidence TAS]; GO:0048503 - GPI anchor binding [Evidence IEA] GO_process : GO:0007605 - sensory perception of sound [Evidence TAS] codon_start : 1 exception : mismatches in translation function : major protein of the tectorial membrane of the inner ear note : [a]-tectorin product : tectorin alpha protein_id : NP_033373.1

name	Tbcel (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370562 CCDS:CCDS23088.1 GeneID:272589 MGI:1925543
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005507 - copper ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 35 protein_id : NP_766626.1

name	Grik4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30348983 CCDS:CCDS23089.1 GeneID:110637 MGI:95817
definition	GO_component : GO:0008328 - ionotropic glutamate receptor complex [Evidence IC]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0004970 - ionotropic glutamate receptor activity [Evidence TAS] GO_process : GO:0006811 - ion transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glutamate receptor KA1 precursor protein_id : NP_780690.1

name	LOC628495 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628495
definition	number : 1 pseudo : _no_value

name	EG667566 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667566
definition	number : 1 pseudo : _no_value

clone name	MSMg01-382F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-093K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-292P16.b	B6Ng01-292P16.g
ACC	GA089476	GA089477
length	1,076	1,053
definition	B6Ng01-292P16.b	B6Ng01-292P16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(41,517,096 - 41,518,178)	(41,401,208 - 41,402,253)
sequence	gaattccatacattgagtatcattccagttacatgcatggaatatcatgt tagctcacctgatggtagccgagtgtcaaaacaacagtagacaagaacag ttctctgaaagaaaatatgtgaacattcatgctgaaccctatacgtagaa tgtgacaaatgttttaaaggttaagaaatgcaaagttagcttccggtcca ttttggctggactgccctataagttacttaaaatgctttgaccttcagaa cttttcatgttgttgaagaagactttgtgtcctctttgtaagagaaggac cctcacttattaaccccttgccttgtatcaagcatcacacagaccttgag tgctacctgggtgctgctttattttgttttaccttcagcatcatgggcag acttttgagctccatttatagatgagaaaaatggatttcaattaaaaacg tgtccaagacctagcaaatagaatacagaaaagatgtgaaccttgaggtt gtttgtttgttagaataattatgtttgcccctgagatggtttgaataggt ttggtccccatagactcatgtgtttgaatgcttggtccatggggagtggc actattaggaggtgtggccgtgttagaagaagtgtgtcctgtcgctgttg ggttgtgcttagaggtctctatgctcaagctccatccagtgtggaatttc agagcctcttcctggttgcctgaggaatagtctccatccctgtgggatgg agggttcagggttgggggcactgtgcaccaggagggccctgtaacaggta ggggctgagcagatgctgagagaatctggtagccaggtcctttcagatat gttaaataggcacctaagccctttgtcccagtatgaaacctaacaatagc ctaggaaaccaggttgtttggggtcagtgtgtgaatgtgtgggtgataga agctaagcatgcaaaggtggaacattaaaaaaaacgaccaaacacatctt cttatgggaaatgaaatgagactcgactttacagaaactaaaatggagac actgagctgagaagtgtgtgtgtgtg	gaattctctaagccacaaacatcattttccgggggttgaaactcttcaga attaccattggccttgagatatcacagcaccaagagaactcagtgttctg gtttcttcctccatcagtgctttctggatctttgagtccccatcttcctt tcccttgtgagcacatgctctccatctctgctttcttgtacttctccctc cattttctcacatgtgtatcccttttttctgctcttccttctaaagtcta tcacctgaccttcaagtctgttcccagcagccatttcctctcagtagacg tcatgtcaaacatccccatcagtagggtgacttctgcaccaaggtgcttt cataacatcttgttatgtttaccaccgaagcgtgatggcttcttcaccag tctcctctcactatgaaagatcctaagactgtgttgttcagtcatttagc atatgtagttctttcaacttacatgaattaatattaaatggatttcagtt cttcatctgtattgactgcatctcaagaactgaatggccacatgtgccta gtgtgcttcccctgccctgcccctccccccatctcataagaacatggcta cacacttcccattgatacagatttctggtccatctctaaaggacaaagat actgttttggtgggtatttcactctctataattggtgcttttaaaaacta aggtatttactgtgtcttacagatgtagcaggaaacaggatgaatgtggt ccttacatatatggtgaataatatgaaggtacttattttcagttatgtag cgtcacccagtacataagtgctcacactcagttgcccctggtaattgctt agggtatttagatactgatacccaagatctttatttttcaaagccttcat aaagctttgaataggcagataaactggaaaactattgacctacggaaata taatattcaattgagctctgaagccaggccctgggggagtataggcttat aatcctagctacctcgatgggctggagattgggagaactgaaaatgccaa gtg
quality values	Open. Hide. 58 29 22 32 58 58 34 13 58 58 42 31 62 62 62 49 62 62 42 41 47 47 62 62 62 41 37 62 62 47 62 42 24 37 32 37 24 38 38 38 35 43 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 59 62 62 59 59 56 49 49 54 59 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 49 47 49 62 62 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 52 58 58 58 58 58 58 54 54 58 54 54 52 58 58 54 58 58 58 54 58 54 43 58 53 58 58 58 42 39 58 58 53 58 58 51 53 46 58 58 48 58 51 46 46 58 52 58 52 50 58 58 58 54 49 42 51 58 58 51 51 51 58 49 33 58 53 42 51 47 58 41 46 32 52 39 54 52 53 58 58 53 53 58 58 58 58 41 31 58 50 54 51 37 50 39 54 50 37 37 53 53 58 51 54 51 58 52 50 58 53 53 33 42 58 39 58 54 47 49 51 49 50 51 50 51 49 52 54 52 36 54 49 53 32 6 54 53 27 30 42 40 52 53 52 50 50 32 53 51 54 42 32 47 35 41 54 52 33 32 52 54 47 32 54 52 32 40 38 32 27 54 54 41 40 53 54 54 54 51 36 20 33 40 45 37 40 41 31 39 53 31 25 33 32 23 52 47 25 46 47 32 37 42 25 32 37 31 29 47 31 40 19 49 49 41 32 40 33 31 8 36 32 12 31 30 31 31 43 38 51 18 51 26 33 31 31 42 43 29 32 22 29 19 31 33 22 9 28 32 32 43 32 47 42 38 28 22 37 21 30 30 31 18 27 19 41 33 25 23 11 33 33 31 36 32 43 32 31 19 31 46 31 27 37 33 30 28 26 46 24 15 10 26 24 30 14 29 48 31 26 22 32 31 37 38 21 30 37 31 27 38 30 31 26 21 17 35 48 31 23 33 31 30 22 15 21 38 31 44 30 25 48 44 48 17 35 24 32 32 29 16 30 30 32 29 29 20 20 10 21 27 37 48 22 20 30 15 13 18 22 33 30 22 31 34 14 30 11 22 17 31 31 28 16 17 17 15 24 29 14 26 15 18 30 17 25 21 15 25 29 27 28 27 28 20 11 4 3 4 12 14 28 7 11 3 4 11 18 10 9 7 13 13 18 11 11 10 31 6 27 40 26 14 19 10 30 14 19 14 6 3 9 13 24 6 5 7 6 33 47 29 9 18 7 22 13 33 11 14 9 16 25 28 3 1 3 12 3 4 9 11 7 20 7 9 6 4 6 13 16 8 18 8 22 6 15 8 2 5 7 9 7 19 11 7 5 2	Open. Hide. 62 38 39 47 62 62 62 62 54 56 56 50 59 59 36 38 34 33 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 54 54 54 62 59 62 62 62 62 62 59 59 59 59 62 62 62 62 54 62 62 54 54 62 62 62 62 62 59 59 59 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 45 62 62 54 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 54 58 58 58 58 54 54 54 54 58 43 43 54 58 58 58 58 58 58 54 54 52 48 58 54 58 58 58 54 58 58 58 58 54 58 52 58 54 58 58 58 58 58 58 58 54 58 58 58 52 58 58 58 54 54 58 58 58 58 58 54 58 58 51 58 51 58 58 58 48 44 58 58 58 58 44 46 58 58 58 52 54 49 54 58 50 58 40 51 37 58 58 58 53 58 50 58 50 52 50 48 48 51 50 48 42 41 52 51 54 47 52 50 43 47 50 54 50 58 58 53 51 58 58 50 51 38 41 54 53 58 58 53 53 58 41 39 58 41 25 49 32 54 39 39 39 52 58 58 58 37 58 58 50 54 37 50 58 58 58 50 41 45 58 58 52 53 53 58 58 53 53 39 47 49 42 37 47 44 42 46 49 51 42 42 54 54 39 31 54 54 54 54 52 52 49 39 20 48 30 40 52 54 37 28 45 45 54 41 54 35 45 54 52 37 45 40 37 32 32 53 53 45 24 53 38 17 54 36 51 46 28 35 16 53 39 26 40 53 45 30 54 42 51 46 29 39 36 53 34 31 45 26 53 32 35 36 32 47 46 31 33 34 31 30 33 32 45 53 42 36 53 45 28 51 31 30 28 40 53 42 38 51 51 8 8 29 15 41 51 24 30 51 35 33 29 39 32 31 33 30 33 46 31 31 34 36 31 31 34 51 31 42 33 36 42 31 32 31 31 31 31 36 31 31 36 32 37 33 31 31 46 46 30 30 37 46 30 31 17 27 31 30 32 34 15 10 11 32 31 30 37 32 46 32 27 18 25 21 25 31 31 35 31 35 31 28 46 13 18 39 31 26 11 18 29 41 36 21 22 47 47 47 34 26 31 42 33 18 11 19 19 17 22 19 15 18 44 33 26 34 31 48 31 27 38 31 29 15 8 23 29 31 24 22 16 21 44 33 31 32 32 30 28 47 43 28 18 29 21 25 12 32 21 18 13 15 25 28 24 13 23 47 14 10 14 21 17 20 20 27 23 28 32 19 24 6 11 7 22 15 24 32 28 21 11 15 18 19 17 15 11 16 12 12 27 10 16 19 16 28 34 10 28 16 17 11 15 25 15 14 27 27 27 15 14 6 21 20 8 21 18 28 20 17 27 24 13 13 7 7 6 26 14 18 40 21 15 15 9 7 26 8 14 10 5 31 30 9 19 7 12 22 16 17 8 10 25 26 21 8 15 8 8 16 12 6 5 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_41517096_41518178
seq2: B6Ng01-292P16.b_49_1124 (reverse)

seq1  CACACACACACCACTTCCTCAGCTCAGGTGTCTCCCTTTTAGTTTCTGTA  50
      |||||||||| ||||| ||||||||| |||||||| ||||||||||||| 
seq2  CACACACACA-CACTT-CTCAGCTCA-GTGTCTCCATTTTAGTTTCTGT-  46

seq1  AAAGTCCGAGTCTCATTTCATTTTCCATAAG-AGATGTGGTTTGTTCGTT  99
      ||||| ||||||||||||||||| ||||||| |||||| ||||| |||||
seq2  AAAGT-CGAGTCTCATTTCATTTCCCATAAGAAGATGT-GTTTGGTCGTT  94

seq1  TTTTTTAATGTTCCACCTTTGCATGCTTAGCTTTCTATCACCCACACATT  149
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTTTTAATGTTCCACCTTTGCATGCTTAGC-TTCTATCACCCACACATT  143

seq1  CACACACTGACCCCAAACAACCTGGTTTCCTAGGCTATTGTTAGGTTTCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTGACCCCAAACAACCTGGTTTCCTAGGCTATTGTTAGGTTTCA  193

seq1  TACTTGGGACAAAGGGCTTAGGTGCCTATTTAACATATCTGAAAGGACCT  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAC-TGGGACAAAGGGCTTAGGTGCCTATTTAACATATCTGAAAGGACCT  242

seq1  GGCTACCAGATTCTCTCAGCATCTGCTCAGCCCCTACCTGTTACAGGGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACCAGATTCTCTCAGCATCTGCTCAGCCCCTACCTGTTACAGGGCC  292

seq1  CTCCTGGTGCACAGTGCCCCCAACCCTGAACCCTCCATCCCACAGGGATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGTGCACAGTGCCCCCAACCCTGAACCCTCCATCCCACAGGGATG  342

seq1  GAGACTATTCCTCAGGCAACCAGGAAGAGGCTCTGAAATTCCACACTGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTATTCCTCAGGCAACCAGGAAGAGGCTCTGAAATTCCACACTGGA  392

seq1  TGGAGCTTGAGCATAGAGACCTCTAAGCACAACCCAACAGCGACAGGACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTTGAGCATAGAGACCTCTAAGCACAACCCAACAGCGACAGGACA  442

seq1  CACTTCTTCTAACACGGCCACACCTCCTAATAGTGCCACTCCCCATGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTCTAACACGGCCACACCTCCTAATAGTGCCACTCCCCATGGAC  492

seq1  CAAGCATTCAAACACATGAGTCTATGGGGACCAAACCTATTCAAACCATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTCAAACACATGAGTCTATGGGGACCAAACCTATTCAAACCATC  542

seq1  TCAGGGGCAAACATAATTATTCTAACAAACAAACAACCTCAAGGTTCACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCAAACATAATTATTCTAACAAACAAACAACCTCAAGGTTCACA  592

seq1  TCTTTTCTGTATTCTATTTGCTAGGTCTTGGACACGTTTTTAATTGAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTGTATTCTATTTGCTAGGTCTTGGACACGTTTTTAATTGAAAT  642

seq1  CCATTTTTCTCATCTATAAATGGAGCTCAAAAGTCTGCCCATGATGCTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTCTCATCTATAAATGGAGCTCAAAAGTCTGCCCATGATGCTGA  692

seq1  AGGTAAAACAAAATAAAGCAGCACCCAGGTAGCACTCAAGGTCTGTGTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAACAAAATAAAGCAGCACCCAGGTAGCACTCAAGGTCTGTGTGA  742

seq1  TGCTTGATACAAGGCAAGGGGTTAATAAGTGAGGGTCCTTCTCTTACAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGATACAAGGCAAGGGGTTAATAAGTGAGGGTCCTTCTCTTACAAA  792

seq1  GAGGACACAAAGTCTTCTTCAACAACATGAAAAGTTCTGAAGGTCAAAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACAAAGTCTTCTTCAACAACATGAAAAGTTCTGAAGGTCAAAGC  842

seq1  ATTTTAAGTAACTTATAGGGCAGTCCAGCCAAAATGGACCGGAAGCTAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGTAACTTATAGGGCAGTCCAGCCAAAATGGACCGGAAGCTAAC  892

seq1  TTTGCATTTCTTAACCTTTAAAACATTTGTCACATTCTACGTATAGGGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTCTTAACCTTTAAAACATTTGTCACATTCTACGTATAGGGTT  942

seq1  CAGCATGAATGTTCACATATTTTCTTTCAGAGAACTGTTCTTGTCTACTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGAATGTTCACATATTTTCTTTCAGAGAACTGTTCTTGTCTACTG  992

seq1  TTGTTTTGACACTCGGCTACCATCAGGTGAGCTAACATGATATTCCATGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGACACTCGGCTACCATCAGGTGAGCTAACATGATATTCCATGC  1042

seq1  ATGTAACTGGAATGATACTCAATGTATGGAATTC  1083
      ||||||||||||||||||||||||||||||||||
seq2  ATGTAACTGGAATGATACTCAATGTATGGAATTC  1076

seq1: chr9_41401208_41402253
seq2: B6Ng01-292P16.g_66_1118

seq1  GAATTCTCTAAGCCACAAACATCATTTTCCGGGGGTTGAAACTCTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAGCCACAAACATCATTTTCCGGGGGTTGAAACTCTTCAGA  50

seq1  ATTACCATTGGCCTTGAGATATCACAGCACCAAGAGAACTCAGTGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCATTGGCCTTGAGATATCACAGCACCAAGAGAACTCAGTGTTCTG  100

seq1  GTTTCTTCCTCCATCAGTGCTTTCTGGATCTTTGAGTCCCCATCTTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTCCTCCATCAGTGCTTTCTGGATCTTTGAGTCCCCATCTTCCTT  150

seq1  TCCCTTGTGAGCACATGCTCTCCATCTCTGCTTTCTTGTACTTCTCCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGTGAGCACATGCTCTCCATCTCTGCTTTCTTGTACTTCTCCCTC  200

seq1  CATTTTCTCACATGTGTATCCCTTTTTTCTGCTCTTCCTTCTAAAGTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTCACATGTGTATCCCTTTTTTCTGCTCTTCCTTCTAAAGTCTA  250

seq1  TCACCTGACCTTCAAGTCTGTTCCCAGCAGCCATTTCCTCTCAGTAGACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGACCTTCAAGTCTGTTCCCAGCAGCCATTTCCTCTCAGTAGACG  300

seq1  TCATGTCAAACATCCCCATCAGTAGGGTGACTTCTGCACCAAGGTGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCAAACATCCCCATCAGTAGGGTGACTTCTGCACCAAGGTGCTTT  350

seq1  CATAACATCTTGTTATGTTTACCACCGAAGCGTGATGGCTTCTTCACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACATCTTGTTATGTTTACCACCGAAGCGTGATGGCTTCTTCACCAG  400

seq1  TCTCCTCTCACTATGAAAGATCCTAAGACTGTGTTGTTCAGTCATTTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTCACTATGAAAGATCCTAAGACTGTGTTGTTCAGTCATTTAGC  450

seq1  ATATGTAGTTCTTTCAACTTACATGAATTAATATTAAATGGATTTCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGTTCTTTCAACTTACATGAATTAATATTAAATGGATTTCAGTT  500

seq1  CTTCATCTGTATTGACTGCATCTCAAGAACTGAATGGCCACATGTGCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCTGTATTGACTGCATCTCAAGAACTGAATGGCCACATGTGCCTA  550

seq1  GTGTGCTTCCCCTGCCCTGCCCCTCCCCCCATCTCATAAGAACATGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTTCCCCTGCCCTGCCCCTCCCCCCATCTCATAAGAACATGGCTA  600

seq1  CACACTTCCCATTGATACAGATTTCTGGTCCATCTCTAAAGGACAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCCCATTGATACAGATTTCTGGTCCATCTCTAAAGGACAAAGAT  650

seq1  ACTGTTTTGGTGGGTATTTCACTCTCTATAATTGGTGCTTTTAAAAACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTGGTGGGTATTTCACTCTCTATAATTGGTGCTTTTAAAAACTA  700

seq1  AGGTATTTACTGTGTCTTACAGATGTAGCAGGAAACAGGATGAATGTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTACTGTGTCTTACAGATGTAGCAGGAAACAGGATGAATGTGGT  750

seq1  CCTTACATATATGGTGAATAATATGAAGGTACTTA-TTTCAGTTATGTAG  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTTACATATATGGTGAATAATATGAAGGTACTTATTTTCAGTTATGTAG  800

seq1  CGTCACCCAGTACATAAGTGCTCACACTCAGTTGCCCCTGGTAATTGCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACCCAGTACATAAGTGCTCACACTCAGTTGCCCCTGGTAATTGCTT  850

seq1  AGGGTATTTAGATACTGATACCCAAGATCTTTATTTTTCAAAGCCTTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATTTAGATACTGATACCCAAGATCTTTATTTTTCAAAGCCTTCAT  900

seq1  AAAGCTTTGAATAGGCAGATAAACTGGAAAACTATTGACCTACGGAAATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTGAATAGGCAGATAAACTGGAAAACTATTGACCTACGGAAATA  950

seq1  TAATATTCAAATGAGCTCTGAAGCCAGGCC--TGGGGAGTATAGGCTTAT  997
      |||||||||| |||||||||||||||||||   |||||||||||||||||
seq2  TAATATTCAATTGAGCTCTGAAGCCAGGCCCTGGGGGAGTATAGGCTTAT  1000

seq1  AATCCTAGCTA-CTCGATGGGCT-GAGA-TGGGAGAACTGAAAATG-CAA  1043
      ||||||||||| ||||||||||| |||| ||||||||||||||||| |||
seq2  AATCCTAGCTACCTCGATGGGCTGGAGATTGGGAGAACTGAAAATGCCAA  1050

seq1  GTG  1046
      |||
seq2  GTG  1053

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Alignment Information