MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-293N10
Chromosome	9 (Build37)
Map Location	81,373,383 - 81,374,540
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG666534
Downstream gene	LOC100039038, Htr1b, LOC671392, 4930486G11Rik, LOC100039085
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG666534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666534 MGI:3644503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Htr1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15551 MGI:96274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 246 ESTs, 17 Proteins

name	4930486G11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75033 MGI:1922283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100039038 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260104 GeneID:100039038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100039038 transcript_id : XM_001472137.1

name	Htr1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754257 GeneID:15551 MGI:96274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 1B transcript_id : NM_010482.1

name	LOC671392 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260100 GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 245 ESTs, 17 Proteins product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 1 transcript_id : XM_001472004.1

name	LOC671392 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260102 GeneID:671392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 170 ESTs, 1 Protein product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A, transcript variant 2 transcript_id : XM_001472036.1

name	4930486G11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803039 GeneID:75033 MGI:1922283
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930486G11 gene transcript_id : NM_175213.3

name	LOC100039038 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260105 GeneID:100039038
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472187.1

name	Htr1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754258 CCDS:CCDS23370.1 GeneID:15551 MGI:96274
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : 5-HT1B receptor; 5-HT<1B> receptor product : 5-hydroxytryptamine (serotonin) receptor 1B protein_id : NP_034612.1

name	LOC671392 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260101 GeneID:671392
definition	codon_start : 1 product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 1 protein_id : XP_001472054.1

name	LOC671392 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260103 GeneID:671392
definition	codon_start : 1 product : similar to protein phosphatase 2A inhibitor-2 I-2PP2A isoform 2 protein_id : XP_001472086.1

name	4930486G11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424840 CCDS:CCDS23371.1 GeneID:75033 MGI:1922283
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC75033 protein_id : NP_780422.1

name	EG666534 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666534
definition	number : 3 pseudo : _no_value

name	EG666534 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666534
definition	number : 2 pseudo : _no_value

name	EG666534 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666534
definition	number : 1 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 4 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 3 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 2 pseudo : _no_value

name	LOC100039085 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039085
definition	number : 1 pseudo : _no_value

clone name	MSMg01-115P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-161A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-316K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-293N10.b	B6Ng01-293N10.g
ACC	GA090120	GA090121
length	1,149	1,141
definition	B6Ng01-293N10.b	B6Ng01-293N10.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctctgtctctgagaccccaaatgtacctgaggttttgagtaagaa tattcaaaggaatttcctgaatattgaaaaaaaaacactaaatgctgatt tgactcttagactacatcagagaaatataccagacccagggccatgatcc atgaatttgatataacttctgggagacacgtatcatgaaaagaatggtga ctgggctttacgagatattttagcagtttcctctatattgtaattccttc atcagggataccatgcccttaaccagactactcctaagacttacctacta tcattaggagtaacattttacatcttctatcctttagtaggataaaaacc atttctatattttaacaattgtattaatatatgcttattttctaaaataa tgaaattttaagaatagtagtatcagagaggtaatatgtccagagaaaat tctacccatggtagtatcagagaggaaagatgtgtagaacattatagata ctacagggaccaaacccacaaggtttgttcattactatgattatgatgcc caggatgatgtctgacattacttgatgttttcaataggtgggatatgaag taatctcaccaaagttggaaaaagtagtatgaggtgcccacaacaaattt taatgatgtcactaatatttgtattcatatctccagtttcatttagcagt tgttagttctgtttacaactaattcttaaaagaagtacccgggggacctt tgggatagcattgaaaatgtaaacgaggaaaatacctaaaaaaaaaaaaa aaaaagaagtacccaatgttactagaatgttttaaatccatgcttctcaa actttctctactgaaaggatcagtttttgtttctgttgcttttgcagtct gttaccagttaataatttgaaaagatataataaaaaccaattactagaac agtgcatagacccacaaatgcaaggcctttgttatttatattggtttctt gtagacccaagctttctcttctaaggtcatccacatgtctcacagcatct ctctgcttactagtgcaacaggacatcatatcaagtgtcatgcaatctgg agacgcgtcctgagaataacttaagccatgctgttcagtacctctgtgc	gaattcctgatctttccaagacttttatcaggaattggtgttggattttg tcaaatgctttctccgcatctaacgagatgatcatgtggtttttgtcttt gagtttgtttataaactggattacgttgatggatttccgtatattgaacc atccctgcatccctgggatgaaacgtacttggtcaggatggatgattgtt ttgatgtgttcttggattcagttagcaagaaatttatttaggatttttgc atccatattcaaagggaaattgttctgaagttctgtatctttgttgggtc tttttgtggtttagatatcagagtaattgtggcttcatagaatgagttgg gtagagaaccttctgtttctattttgtggaatagtttgtgaagaactggg attagatcttctttgaaggtctgatagaactctgcactaaatccatctgg tcctgggcttttttttttttttttttttttttttttttggctgggagact attaatgactgcttctatgcctttaggggatatgggactgtttagatcat taacttgatcctgatttaactttggtacctggtatctatctcaaaatttg tccatttcgtccaggtattccagttttgttgagtatagccttctgtagaa ggatctgatggtgttttggaattcttcaggatctgttgttatgcctccat tttcatttctgattttgttaattaaaatgctttccctgtgccctttagtg agtctggctaaagggtttatctagcttgtttgatttttctcaaaagaacc agctactcgattggttgattattttgaatagttcttcttgtttccacttt ggttgatttcgccccctgagtttgattattttcctgccttcttactcctc ttgggatgatttttgtttctttttgttggtagaagctttttatgtgtgtc gtcagctggctaaatgtgtgcttctctctagtttcttttttgaggcactc aaagctataggttttcctcttagaaatgcctttcatgtgtcccataagtt tgggattgtgtggctttatttcatttacttcaaagtctgaatctttctta ttccttcttgaccagtatacattggctaaaagttgcctagg
quality values	Open. Hide. 62 47 16 31 62 62 62 62 62 62 62 62 62 62 62 62 49 54 47 33 62 62 59 39 62 62 62 62 62 62 62 62 39 45 24 21 29 32 32 28 38 42 49 56 54 56 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 54 59 59 59 54 54 54 54 54 56 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 58 58 58 58 58 54 58 54 58 58 58 49 41 58 54 58 58 58 46 58 58 58 58 52 52 58 42 54 58 58 54 58 58 58 58 58 54 54 54 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 42 58 54 54 58 51 54 58 58 58 45 40 49 51 58 58 58 50 58 48 51 51 58 58 54 50 41 38 40 58 58 53 58 58 58 58 58 58 58 58 58 43 51 54 54 51 50 49 58 58 45 58 53 51 46 58 53 53 52 50 58 51 40 58 54 51 58 58 46 58 50 47 58 51 41 58 53 53 39 39 49 51 58 53 53 41 58 58 58 50 50 43 49 51 37 50 52 51 58 53 50 54 34 53 58 58 51 50 37 38 58 47 41 38 52 53 53 52 51 54 39 39 42 37 52 52 53 53 51 26 54 45 37 52 31 51 53 42 39 49 42 54 51 52 50 49 54 54 54 29 49 33 32 52 32 40 39 44 32 54 54 54 51 29 23 26 33 49 40 53 54 53 31 27 45 40 42 31 42 52 45 47 54 52 34 32 41 31 34 52 32 34 23 47 24 46 45 52 51 31 31 29 25 52 43 40 53 53 53 46 37 40 46 51 52 46 46 46 46 40 11 10 9 9 15 15 23 31 29 31 51 40 16 27 31 41 46 19 22 30 31 39 31 31 22 18 40 30 51 47 8 8 37 31 32 23 31 29 30 43 31 22 31 31 30 22 27 42 37 22 33 46 31 29 31 32 30 28 25 32 31 18 46 14 33 18 30 24 31 31 31 31 46 46 48 34 32 24 41 24 27 30 26 14 27 21 23 33 46 46 32 36 34 28 34 31 31 27 41 27 31 31 31 31 29 32 30 25 22 29 22 23 16 21 44 31 17 25 44 38 33 31 23 13 17 29 19 23 32 36 48 48 44 29 16 31 18 29 31 35 27 32 34 22 18 26 30 30 24 32 28 34 20 29 4 19 15 14 7 25 12 10 14 19 37 10 21 26 25 15 10 25 14 18 15 31 39 28 22 16 11 10 24 43 19 8 4 10 19 19 18 13 9 38 28 11 6 8 18 17 20 13 27 24 27 17 6 12 26 16 27 34 11 10 7 11 12 5 6 6 9 30 9 6 30 9 14 27 28 20 6 10 4 9 25 21 16 16 21 8 9 19 14 27 14 18 24 4 10 12 9 7 11 18 8 11 9 13 18 7 5 6 7 5 2 2 13 3 5 7 6 5 8 2 5 9 13 6 6 11 13 11 17 8 3 2 3 10 16 8 20 5 5 24 10 9 5 5 6 3 11 10 9 11 5 19 5 9 16 21 13 9 16 18 6 4 5 4 4 5 16 14 8 8 7 11 5 7 14 10 6 4 4 13 16 7 13 8 18 4 11 5 5 4 6 2 3	Open. Hide. 62 47 42 44 62 62 62 62 62 43 43 43 27 28 28 28 20 16 40 40 46 40 43 59 59 59 62 62 59 49 62 62 59 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 50 51 56 56 56 48 59 59 62 54 62 54 43 62 59 62 62 59 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 35 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 27 30 18 24 28 35 23 22 9 22 17 12 13 17 29 26 29 21 25 20 22 19 28 21 21 24 27 24 22 25 24 29 33 29 39 35 22 24 52 50 35 34 22 22 33 26 30 19 24 17 17 25 18 26 27 23 16 33 26 19 26 25 46 37 46 42 32 42 34 30 46 32 33 18 21 21 23 33 25 22 33 30 33 33 33 33 40 19 28 34 35 33 50 40 27 39 34 34 33 27 31 37 31 28 23 29 35 46 34 40 32 31 35 36 40 21 46 43 40 39 25 27 26 30 19 25 30 32 31 33 33 30 35 16 24 39 53 37 35 28 20 28 23 41 25 31 32 29 50 33 24 40 25 37 32 30 28 14 31 13 36 33 6 35 18 28 35 26 21 32 16 27 36 24 45 28 42 41 49 36 38 37 40 23 40 37 30 40 35 22 18 38 29 23 37 24 34 30 35 40 29 18 22 16 20 21 30 9 23 33 16 32 38 40 42 32 26 24 22 19 27 24 31 31 14 19 19 19 29 20 19 33 40 29 26 16 10 31 34 19 32 29 28 52 32 26 32 30 12 23 19 32 27 46 34 18 34 27 21 12 30 31 31 22 21 31 32 32 53 16 30 17 40 18 28 45 28 13 30 31 29 34 43 35 31 20 31 31 23 32 8 18 28 29 19 15 31 51 28 32 23 24 30 22 43 51 31 8 14 46 17 31 17 16 31 25 32 43 28 46 12 31 19 16 31 33 5 20 27 31 25 10 11 11 17 32 27 31 33 42 13 12 11 27 25 37 29 13 16 6 31 41 18 23 9 9 23 9 22 8 38 9 7 6 6 7 21 13 7 46 32 22 9 30 46 46 46 31 21 34 31 12 21 41 31 30 25 20 42 14 8 41 44 24 17 31 15 23 11 31 11 36 11 9 9 15 31 15 30 37 13 11 9 10 21 22 29 11 14 16 25 10 23 43 8 6 6 6 28 25 14 6 6 10 36 31 21 9 21 18 21 8 21 14 32 27 17 12 10 33 36 39 21 10 11 8 7 22 14 12 17 31 12 7 15 19 7 14 21 12 8 7 21 9 6 6 8 10 15 7 5 7 18 22 10 17 7 10 20 27 13 27 18 28 29 21 13 13 29 21 28 21 3 4 4 6 8 4 6 5 5 6 4 3 13 5 4 6 5 6 24 6 5 38 47 27 11 32 9 6 11 14 13 9 5 17 15 11 9 28 9 10 15 29 15 14 13 27 8 6 6 6 13 26 18 8 6 23 19 7 3 12 6 8 15 13 1 4 3 4 5 5 4 9 17 3 6 9 4 3 4 28 22 5 1 3 3 4 3 2 4 5 18 7 16 9 7 6 10 3 1 5 17 9 3 3 1 3 4 12 8 11 7 8 8 3 2 3 18 7 4 8 7 11 5 3 3 1 6 10 4 8 7 6 8 4 4 3 3 10 30 30 17 3 4 11 6 11 8 7 11 5 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_81373383_81374540
seq2: B6Ng01-293N10.b_47_1195 (reverse)

seq1  GCACAGAGGTACTG-ACAGCAT-GCTTTAGTGTATCTCAGAACGCGTTCT  48
      |||||||||||||| ||||||| |||| |||   |||||| ||||| |||
seq2  GCACAGAGGTACTGAACAGCATGGCTTAAGTTATTCTCAGGACGCG-TCT  49

seq1  CAAGAATGGCATGGCCACTTGATATGATTGTCCCTGGTTGGCACTAAGGT  98
      | || || |||| | |||||||||||| ||| ||||  | ||||||  ||
seq2  CCAG-ATTGCAT-GACACTTGATATGA-TGT-CCTG--TTGCACTA--GT  91

seq1  AAGCAGAGAGGATGCTGTGAGACATGGTGGATGAACTTAG-AGAGAAAGC  147
      ||||||||| ||||||||||||||| |||||||| ||||| |||||||||
seq2  AAGCAGAGA-GATGCTGTGAGACAT-GTGGATGACCTTAGAAGAGAAAGC  139

seq1  TTGGGTCTAC-AGAAACCAATATTAAAATAACAAAGGCCTTGCATTTGTG  196
      |||||||||| ||||||||||||  |||||||||||||||||||||||||
seq2  TTGGGTCTACAAGAAACCAATAT--AAATAACAAAGGCCTTGCATTTGTG  187

seq1  GGTCTATTGCACTGTTCTAGTAATTGGTTTTTATTATATCTTTTCAAATT  246
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTA-TGCACTGTTCTAGTAATTGGTTTTTATTATATCTTTTCAAATT  236

seq1  ATTAACTGGTAACAGACTGCAAAAGCAACAGAAACAAAAACTGATCC-TT  295
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTAACTGGTAACAGACTGCAAAAGCAACAGAAACAAAAACTGATCCTTT  286

seq1  CAGTAGAGAAAGTTTGAGAAGCATGGATTTAAAACATTCTAGTAACATTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGAAAGTTTGAGAAGCATGGATTTAAAACATTCTAGTAACATTG  336

seq1  GGTACTTCTTTTTTTTTTTTTTTTTTAGGTATTTTCCTCGTTTACATTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTCTTTTTTTTTTTTTTTTTTAGGTATTTTCCTCGTTTACATTTT  386

seq1  CAATGCTATCCCAAAGGTCCCCCGGGTACTTCTTTTAAGAATTAGTTGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTATCCCAAAGGTCCCCCGGGTACTTCTTTTAAGAATTAGTTGTA  436

seq1  AACAGAACTAACAACTGCTAAATGAAACTGGAGATATGAATACAAATATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAACTAACAACTGCTAAATGAAACTGGAGATATGAATACAAATATT  486

seq1  AGTGACATCATTAAAATTTGTTGTGGGCACCTCATACTACTTTTTCCAAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATCATTAAAATTTGTTGTGGGCACCTCATACTACTTTTTCCAAC  536

seq1  TTTGGTGAGATTACTTCATATCCCACCTATTGAAAACATCAAGTAATGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGAGATTACTTCATATCCCACCTATTGAAAACATCAAGTAATGTC  586

seq1  AGACATCATCCTGGGCATCATAATCATAGTAATGAACAAACCTTGTGGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCATCCTGGGCATCATAATCATAGTAATGAACAAACCTTGTGGGT  636

seq1  TTGGTCCCTGTAGTATCTATAATGTTCTACACATCTTTCCTCTCTGATAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCCTGTAGTATCTATAATGTTCTACACATCTTTCCTCTCTGATAC  686

seq1  TACCATGGGTAGAATTTTCTCTGGACATATTACCTCTCTGATACTACTAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGGGTAGAATTTTCTCTGGACATATTACCTCTCTGATACTACTAT  736

seq1  TCTTAAAATTTCATTATTTTAGAAAATAAGCATATATTAATACAATTGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAATTTCATTATTTTAGAAAATAAGCATATATTAATACAATTGTT  786

seq1  AAAATATAGAAATGGTTTTTATCCTACTAAAGGATAGAAGATGTAAAATG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAGAAATGGTTTTTATCCTACTAAAGGATAGAAGATGTAAAATG  836

seq1  TTACTCCTAATGATAGTAGGTAAGTCTTAGGAGTAGTCTGGTTAAGGGCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCTAATGATAGTAGGTAAGTCTTAGGAGTAGTCTGGTTAAGGGCA  886

seq1  TGGTATCCCTGATGAAGGAATTACAATATAGAGGAAACTGCTAAAATATC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCCCTGATGAAGGAATTACAATATAGAGGAAACTGCTAAAATATC  936

seq1  TCGTAAAGCCCAGTCACCATTCTTTTCATGATACGTGTCTCCCAGAAGTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTAAAGCCCAGTCACCATTCTTTTCATGATACGTGTCTCCCAGAAGTT  986

seq1  ATATCAAATTCATGGATCATGGCCCTGGGTCTGGTATATTTCTCTGATGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAATTCATGGATCATGGCCCTGGGTCTGGTATATTTCTCTGATGT  1036

seq1  AGTCTAAGAGTCAAATCAGCATTTAGTGTTTTTTTTTCAATATTCAGGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAGAGTCAAATCAGCATTTAGTGTTTTTTTTTCAATATTCAGGAA  1086

seq1  ATTCCTTTGAATATTCTTACTCAAAACCTCAGGTACATTTGGGGTCTCAG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTGAATATTCTTACTCAAAACCTCAGGTACATTTGGGGTCTCAG  1136

seq1  AGACAGAGAATTC  1158
      |||||||||||||
seq2  AGACAGAGAATTC  1149

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information