MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-298I24
Chromosome	9 (Build37)
Map Location	104,789,834 - 104,911,743
singlet/doublet	doublet
Overlap gene	Cpne4
Upstream gene	EG384978, Nphp3, Ube1dc1, Acad11, Ccrl1, Hmgb1-rs16, Acpp, LOC100040921
Downstream gene	Mrpl3, Nudt16, 1700080E11Rik, Nek11, Aste1, Atp2c1, EG434434, LOC664981, Pik3r4, E330026B02Rik, EG665033, 1110001D15Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG384978 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384978 MGI:3645790
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Nphp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74025 MGI:1921275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube1dc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66663 MGI:1913913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acad11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102632 MGI:2143169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccrl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252837 MGI:2181676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmgb1-rs16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15296 MGI:104765
definition	gene_synonym : Hmg1-rs16 note : high mobility group box 1, related sequence 16 pseudo : _no_value

name	Acpp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56318 MGI:1928480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040921 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Cpne4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74020 MGI:1921270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94062 MGI:2137204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75686 MGI:1922936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700080E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73532 MGI:1920782
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nek11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208583 MGI:2442276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aste1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66595 MGI:1913845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp2c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235574 MGI:1889008
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434434 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434434 MGI:3646701
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1414 ESTs, 9 Proteins

name	LOC664981 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664981
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins pseudo : _no_value

name	Pik3r4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75669 MGI:1922919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E330026B02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245026 MGI:2444259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665033 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665033 MGI:3648134
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins pseudo : _no_value

name	1110001D15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68553 MGI:1915803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nphp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50878276 GeneID:74025 MGI:1921275
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephronophthisis 3 (adolescent) transcript_id : NM_028721.2

name	Ube1dc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803582 GeneID:66663 MGI:1913913
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-activating enzyme E1-domain containing 1 transcript_id : NM_025692.2

name	Acad11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803267 GeneID:102632 MGI:2143169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-Coenzyme A dehydrogenase family, member 11 transcript_id : NM_175324.3

name	Ccrl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21746186 GeneID:252837 MGI:2181676
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) receptor-like 1 transcript_id : NM_145700.1

name	Acpp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92373432 GeneID:56318 MGI:1928480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acid phosphatase, prostate transcript_id : NM_207668.2

name	Acpp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46575783 GeneID:56318 MGI:1928480
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acid phosphatase, prostate transcript_id : NM_019807.2

name	Cpne4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037332 GeneID:74020 MGI:1921270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine IV transcript_id : NM_028719.1

name	Mrpl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131171 GeneID:94062 MGI:2137204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L3 transcript_id : NM_053159.3

name	Nudt16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656156 GeneID:75686 MGI:1922936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleoside diphosphate linked moiety X)-type motif 16 transcript_id : NM_029385.2

name	1700080E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802385 GeneID:73532 MGI:1920782
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700080E11 gene transcript_id : NM_028562.2

name	Nek11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363104 GeneID:208583 MGI:2442276
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NIMA (never in mitosis gene a)-related expressed kinase 11 transcript_id : NM_172461.2

name	Aste1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381893 GeneID:66595 MGI:1913845
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asteroid homolog 1 (Drosophila) transcript_id : NM_025651.3

name	Atp2c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33186871 GeneID:235574 MGI:1889008
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, Ca++-sequestering transcript_id : NM_175025.2

name	EG434434 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260314 GeneID:434434 MGI:3646701
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 1414 ESTs, 9 Proteins product : predicted gene, EG434434, transcript variant 2 transcript_id : XM_889722.3

name	Pik3r4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486788 GeneID:75669 MGI:1922919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150 transcript_id : NM_001081309.1

name	E330026B02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353746 GeneID:245026 MGI:2444259
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330026B02 gene transcript_id : NM_172927.2

name	1110001D15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286815 GeneID:68553 MGI:1915803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110001D15 gene transcript_id : NM_026763.1

name	Nphp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50878277 GeneID:74025 MGI:1921275
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006629 - lipid metabolism [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy note : polycystic kidney disease product : nephrocystin 3 protein_id : NP_082997.2

name	Ube1dc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313374 CCDS:CCDS23457.1 GeneID:66663 MGI:1913913
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ubiquitin-activating enzyme E1-domain containing 1 protein_id : NP_079968.1

name	Acad11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74271799 CCDS:CCDS23458.1 GeneID:102632 MGI:2143169
definition	GO_function : GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : acyl-Coenzyme A dehydrogenase family, member 11 protein_id : NP_780533.2

name	Ccrl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746187 CCDS:CCDS23459.1 GeneID:252837 MGI:2181676
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016493 - C-C chemokine receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : chemokine receptor CCX-CKR; chemokine receptor CCR11; chemokine (C-C) receptor-like 1 product : chemokine (C-C motif) receptor-like 1 protein_id : NP_663746.1

name	Acpp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575782 CCDS:CCDS23460.1 GeneID:56318 MGI:1928480
definition	GO_function : GO:0003993 - acid phosphatase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; lysosomal acid phosphatase product : acid phosphatase, prostate isoform 1 protein_id : NP_997551.1

name	Acpp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575784 GeneID:56318 MGI:1928480
definition	GO_function : GO:0003993 - acid phosphatase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; lysosomal acid phosphatase product : acid phosphatase, prostate isoform 2 protein_id : NP_062781.2

name	Cpne4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037333 CCDS:CCDS23461.1 GeneID:74020 MGI:1921270
definition	codon_start : 1 product : copine IV protein_id : NP_082995.1

name	Mrpl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981470 CCDS:CCDS23462.1 GeneID:94062 MGI:2137204
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence TAS] codon_start : 1 product : mitochondrial ribosomal protein L3 protein_id : NP_444389.2

name	Nudt16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656157 GeneID:75686 MGI:1922936
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : nudix-type motif 16 protein_id : NP_083661.2

name	1700080E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386322 CCDS:CCDS23463.1 GeneID:73532 MGI:1920782
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC73532 protein_id : NP_082838.1

name	Nek11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369621 CCDS:CCDS23464.1 GeneID:208583 MGI:2442276
definition	GO_component : GO:0005730 - nucleolus [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0031573 - intra-S DNA damage checkpoint [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS]; GO:0007243 - protein kinase cascade [Evidence ISS] codon_start : 1 exception : mismatches in translation note : NIMA (never in mitosis gene a)- related kinase 11 product : NIMA (never in mitosis gene a)-related expressed kinase 11 protein_id : NP_766049.1

name	Aste1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560235 CCDS:CCDS23465.1 GeneID:66595 MGI:1913845
definition	codon_start : 1 product : asteroid homolog 1 protein_id : NP_079927.2

name	Atp2c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33186872 GeneID:235574 MGI:1889008
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence TAS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005388 - calcium-transporting ATPase activity [Evidence TAS] [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0006812 - cation transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0045045 - secretory pathway [Evidence TAS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ATPase, Ca++ transporting, type 2C, member 1 product : calcium-transporting ATPase 2C1 protein_id : NP_778190.2

name	EG434434 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82931053 GeneID:434434 MGI:3646701
definition	codon_start : 1 product : similar to QM protein isoform 2 protein_id : XP_894815.1

name	Pik3r4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486789 GeneID:75669 MGI:1922919
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150 protein_id : NP_001074778.1

name	E330026B02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370430 CCDS:CCDS23468.1 GeneID:245026 MGI:2444259
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC245026 protein_id : NP_766515.1

name	1110001D15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124286816 GeneID:68553 MGI:1915803
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : collagen type VI alpha 4 protein_id : NP_081039.1

name	EG384978 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384978
definition	number : 1 pseudo : _no_value

name	EG384978 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384978
definition	number : 2 pseudo : _no_value

name	LOC100040921 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040921
definition	number : 3 pseudo : _no_value

name	LOC100040921 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040921
definition	number : 2 pseudo : _no_value

name	LOC100040921 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040921
definition	number : 1 pseudo : _no_value

name	LOC664981 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260296 GeneID:664981
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : hypothetical LOC664981 pseudo : _no_value transcript_id : XR_032330.1

name	EG665033 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260297 GeneID:665033 MGI:3648134
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins product : predicted gene, EG665033 pseudo : _no_value transcript_id : XR_035671.1

clone name	MSMg01-381E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-298I24.b	B6Ng01-298I24.g
ACC	GA093636	GA093637
length	1,001	896
definition	B6Ng01-298I24.b	B6Ng01-298I24.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(104,789,834 - 104,790,830)	(104,910,848 - 104,911,743)
sequence	gaattctgctgttacaattaatttgctgacagggccctagtggaatcaga catctgagaactgaggagacaaagctctcttcccgctgaggagtgtgccc tcttctgaacacttctgtggaaggggactgtacactctcatgagagagac atataatgagactgtaccctgtggttccatttgcctaggccatattaact taaacacatcatgttgttttaattaatcacatttttctttcatttttaaa atgccccactttgaacaacataattttgtggctacttcatagtaataaat cgcttttgtagctgaccagttcagagagctgatcttaggtctggctggca cttatgaccctggtgctcttgatggtatcatagttatcattgctaccatc acagttgccatcatcatcatcgtcatcatcattgtcatcactagtaccat catcaccgtcaacactatcaccaccattagtcatcataaccatcacatca tccccactaccacagccattaccatcaccatcagtgctgtcaccaacatc aataattaccactatcatcaccatcactatcatcccccaccataactata atgctatcttaatcattattatcaccatcactaccagcagcagcagcagc agcataatgatcactaccatcattgctacctgtccaaccatcatcatcat catcatcatcatcatcatcaacaacaacaacaacaacaacagcaacagca acagcaacaactacaacaacacccaggcaagaacagaagcctgcaaactg gcacagcaaaacttacatgagacatctggattcatggaaattccaagatg ctcttctcatattcctaatctatattacatctgccctgtttcatatcctt aataagaaaactattaaaacagttttaaaatcctcactgggttttctctt aagtgttagataaaaagaagagaaggaggaggatgaggaagaggaaggag g	gaattctgaagaagaaggctctaatgccagtgaaggaatggagctgctag tgagagcaagcaggcaaagggaaaaaagcttccttcttccatgtccttta tataggccgccatcagaagatgtgggtcaaaataaaggtatatttttttt ccacctcaaaagatccagactgaaagtaagtctttctactttaaatgact taaatcaagaagaaattcctcccataggtgtccctagctgcttggggttc agttgacagccaagaatggccgtcacagatctcaatgatttaaaatgatt actgaagtatgctttaggtgtgcagcaagagccactggaaagtttggggg ggggtgcttactgctcagtgattgcatagggtctggcaagccaatcccta agtgtctctatgctacactaaggtattttgctgaccagattgaatagaga tctcagcaggcaggagactgactggacctttcctatagctcatgctggag gtttcacaagggtgtgtcctttactgtgctctggcagaaacaggttttta gagtggttgttaccagtaatgagctcaggaagagcagaaataacgatatg tgctcatgttgctctacaaccagagcacagagatgctttgtttatcttct tggattaaaaggtcagctgcttacagctcgttaccaactaagcttgtttc cccatcacaccagggagtcctctgagaggtgcacctttgtgtttacattg gttccacctccagaagccttaggtaaacatctgtgctccttccctttatc cagtgacacaggagtgacagcaaatccagcttgctagagaaataaataat agtgattgaatcttaagataatctctgcataatatgtgagtgcgcg
quality values	Open. Hide. 41 13 25 26 58 58 42 33 47 58 58 58 42 35 39 16 62 62 47 62 62 54 62 62 49 62 62 62 47 56 47 51 54 43 22 32 30 56 50 43 44 62 49 49 62 47 62 47 62 54 56 62 62 62 62 62 59 59 59 62 59 62 62 59 59 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 46 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 53 58 58 54 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 54 48 58 54 58 58 54 52 58 58 58 58 54 51 58 49 54 58 58 48 58 58 58 45 45 42 58 51 51 58 58 58 58 58 58 58 58 46 41 46 42 58 58 58 58 51 51 58 53 54 58 58 51 50 51 44 46 58 58 58 58 50 49 58 58 50 43 41 38 58 58 51 58 54 52 58 51 51 58 51 58 58 58 40 43 41 44 51 53 52 50 58 58 54 58 58 58 41 58 40 58 51 58 53 53 58 54 58 53 53 52 51 58 49 47 51 52 51 53 52 51 47 50 58 54 52 58 51 52 58 50 39 52 54 53 53 51 53 50 54 53 52 54 53 42 51 52 52 53 42 53 38 54 50 54 49 49 37 37 41 39 41 44 42 42 53 37 39 54 53 53 49 37 39 50 34 35 54 47 40 38 31 52 41 42 37 51 35 42 51 32 30 53 40 40 53 42 45 52 39 45 52 31 40 53 34 40 53 34 34 53 37 38 53 33 41 36 28 28 33 25 21 35 47 19 30 24 28 52 41 33 34 52 35 35 33 28 53 47 47 45 42 31 34 40 40 42 52 35 45 42 24 25 27 15 34 34 45 34 36 29 29 31 31 33 45 30 30 46 30 31 13 33 30 31 32 31 27 31 29 28 31 51 42 24 29 31 36 43 38 36 51 31 27 31 32 51 31 27 30 31 32 28 30 46 46 30 31 26 42 29 31 31 36 31 38 23 32 18 25 28 28 31 35 42 27 22 31 29 23 29 27 29 13 48 13 27 11 12 31 27 31 26 33 19 31 24 24 32 30 25 41 35 32 34 24 19 18 33 30 31 31 36 41 26 32 33 37 25 36 26 24 28 27 31 31 27 31 37 27 47 19 19 25 15 48 35 30 21 18 19 31 38 28 21 17 34 31 10 16 29 21 36 48 48 33 20 24 32 18 24 26 48 44 29 17 29 20 27 41 41 29 24 48 48 23 26 18 25 27 33 32 27 31 32 48 30 17 48 37 7 7 19 7 5 21 24 29 19 27 13 6 28 17 14 32 20 22 43 43 43 29 14 19 33 18 33 15 22 24 15 10 24 19 9 29 9 14 30 15 17 25 7 20 17 18 13 13 19 7 14 10 26 14 14 14 34	Open. Hide. 62 38 39 47 62 62 62 62 62 62 35 47 38 25 28 36 34 28 28 56 59 59 59 62 62 62 62 59 59 62 59 59 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 59 62 59 59 62 59 59 59 62 62 59 59 59 62 59 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 49 62 62 54 54 54 58 58 58 58 58 54 54 58 54 54 53 54 58 58 54 54 58 54 58 58 58 58 46 58 49 35 45 42 58 58 54 54 58 58 58 54 45 58 54 58 58 52 58 58 54 58 54 58 58 58 54 54 58 58 58 58 58 58 54 35 54 58 58 54 52 52 54 47 51 48 38 41 51 58 53 58 58 51 58 58 58 58 53 53 58 58 52 58 58 51 47 49 58 58 50 51 42 58 58 50 50 50 58 58 46 58 58 58 50 49 46 58 51 50 58 37 41 58 58 53 54 40 49 50 31 50 51 50 58 49 58 54 51 58 58 50 49 22 58 50 58 37 58 40 50 52 39 58 41 50 53 53 50 37 33 50 52 53 51 58 49 58 50 58 50 42 53 58 53 54 49 39 49 52 50 32 43 24 50 42 43 52 41 54 40 53 42 52 44 38 39 35 39 34 49 52 53 54 49 51 42 54 49 39 39 53 53 53 42 26 40 54 37 38 23 51 37 54 54 39 18 49 28 40 37 32 51 42 53 42 51 53 32 40 39 45 41 37 34 41 35 35 28 37 45 35 53 40 28 19 46 33 42 52 32 46 24 51 29 29 40 32 19 23 52 35 32 31 34 25 32 30 29 52 46 15 14 33 29 37 31 26 32 32 37 21 32 23 53 27 45 31 31 26 42 46 51 31 31 31 45 31 51 35 23 33 25 31 24 43 30 29 26 21 32 28 31 38 27 21 31 31 33 51 32 18 43 42 30 21 22 27 28 31 35 48 27 30 25 38 32 31 42 28 37 36 31 32 33 38 27 18 48 41 37 48 42 21 26 29 31 33 34 18 33 33 25 27 31 33 26 43 31 13 31 38 33 28 25 33 37 24 46 31 32 31 31 25 30 31 35 30 33 21 32 32 14 46 8 31 48 31 31 31 48 37 28 30 27 29 31 24 26 31 31 23 19 31 19 32 18 20 15 31 20 19 11 30 10 12 29 29 24 20 28 31 31 31 20 21 6 6 15 7 6 17 20 18 37 28 27 23 5 6 11 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_104789834_104790830
seq2: B6Ng01-298I24.b_47_1047

seq1  GAATTCTGCTGTTACAATTAATTTGCTGACAGGGCCCTAGTGGAATCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGTTACAATTAATTTGCTGACAGGGCCCTAGTGGAATCAGA  50

seq1  CATCTGAGAACTGAGGAGACAAAGCTCTCTTCCCGCTGAGGAGTGTGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAGAACTGAGGAGACAAAGCTCTCTTCCCGCTGAGGAGTGTGCCC  100

seq1  TCTTCTGAACACTTCTGTGGAAGGGGACTGTACACTCTCATGAGAGAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGAACACTTCTGTGGAAGGGGACTGTACACTCTCATGAGAGAGAC  150

seq1  ATATAATGAGACTGTACCCTGTGGTTCCATTTGCCTAGGCCATATTAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGAGACTGTACCCTGTGGTTCCATTTGCCTAGGCCATATTAACT  200

seq1  TAAACACATCATGTTGTTTTAATTAATCACATTTTTCTTTCATTTTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACATCATGTTGTTTTAATTAATCACATTTTTCTTTCATTTTTAAA  250

seq1  ATGCCCCACTTTGAACAACATAATTTTGTGGCTACTTCATAGTAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCACTTTGAACAACATAATTTTGTGGCTACTTCATAGTAATAAAT  300

seq1  CGCTTTTGTAGCTGACCAGTTCAGAGAGCTGATCTTAGGTCTGGCTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTGTAGCTGACCAGTTCAGAGAGCTGATCTTAGGTCTGGCTGGCA  350

seq1  CTTATGACCCTGGTGCTCTTGATGGTATCATAGTTATCATTGCTACCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGACCCTGGTGCTCTTGATGGTATCATAGTTATCATTGCTACCATC  400

seq1  ACAGTTGCCATCATCATCATCGTCATCATCATTGTCATCACTAGTACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGCCATCATCATCATCGTCATCATCATTGTCATCACTAGTACCAT  450

seq1  CATCACCGTCAACACTATCACCACCATTAGTCATCATAACCATCACATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCGTCAACACTATCACCACCATTAGTCATCATAACCATCACATCA  500

seq1  TCCCCACTACCACAGCCATTACCATCACCATCAGTGCTGTCACCAACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACTACCACAGCCATTACCATCACCATCAGTGCTGTCACCAACATC  550

seq1  AATAATTACCACTATCATCACCATCACTATCATCCCCCACCATAACTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTACCACTATCATCACCATCACTATCATCCCCCACCATAACTATA  600

seq1  ATGCTATCTTAATCATTATTATCACCATCACTACCAGCAGCAGCAGCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATCTTAATCATTATTATCACCATCACTACCAGCAGCAGCAGCAGC  650

seq1  AGCATAATGATCACTACCATCATTGCTACCTGTCCAACCATCATCATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATGATCACTACCATCATTGCTACCTGTCCAACCATCATCATCAT  700

seq1  CATCATCATCATCATCATCAACAACAACAACAACAACAACAGCAACAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATCATCATCATCAACAACAACAACAACAACAACAGCAACAGCA  750

seq1  ACAGCAACAACTACAACAACACCCAGGCAAGAACAGAAGCCTGCAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACAACTACAACAACACCCAGGCAAGAACAGAAGCCTGCAAACTG  800

seq1  GCACAGCAAAACTTACATGAGACATCTGGATTCATGG-AATTCCAAGATG  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCACAGCAAAACTTACATGAGACATCTGGATTCATGGAAATTCCAAGATG  850

seq1  CTCTTCTCATATTCCTAATCTATATTACATCTGCCCTGTTTCATATCCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCATATTCCTAATCTATATTACATCTGCCCTGTTTCATATCCTT  900

seq1  AATAAGAAAACTATTAAAACAGTTTTAAAATCCTCACTGGG-TTTCTC-T  947
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  AATAAGAAAACTATTAAAACAGTTTTAAAATCCTCACTGGGTTTTCTCTT  950

seq1  AAGTGTTAGATAAAAAGAAGAGAAGGAGGAGGATGAGGAAGAGG-AGGAG  996
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGTGTTAGATAAAAAGAAGAGAAGGAGGAGGATGAGGAAGAGGAAGGAG  1000

seq1  G  997
      |
seq2  G  1001

seq1: chr9_104910848_104911743
seq2: B6Ng01-298I24.g_65_960 (reverse)

seq1  CGCGCACTCACATA-TATGCAGAGATTATCTTAAGATTCAATCACTATTA  49
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CGCGCACTCACATATTATGCAGAGATTATCTTAAGATTCAATCACTATTA  50

seq1  TTTATTTCTTCTAGCAAGCTGGATTTGCTGTCACTCCTGTGTCACTGGAT  99
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTC-TCTAGCAAGCTGGATTTGCTGTCACTCCTGTGTCACTGGAT  99

seq1  AAAGGGAAGGAGCACAGATGTTTACCTAAGGCTTCTGGAGGTGGAACCAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAGGAGCACAGATGTTTACCTAAGGCTTCTGGAGGTGGAACCAA  149

seq1  TGTAAACACAAAGGTGCACCTCTCAGAGGACTCCCTGGTGTGATGGGGAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACACAAAGGTGCACCTCTCAGAGGACTCCCTGGTGTGATGGGGAA  199

seq1  ACAAGCTTAGTTGGTAACGAGCTGTAAGCAGCTGACCTTTTAATCCAAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTTAGTTGGTAACGAGCTGTAAGCAGCTGACCTTTTAATCCAAGA  249

seq1  AGATAAACAAAGCATCTCTGTGCTCTGGTTGTAGAGCAACATGAGCACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACAAAGCATCTCTGTGCTCTGGTTGTAGAGCAACATGAGCACAT  299

seq1  ATCGTTATTTCTGCTCTTCCTGAGCTCATTACTGGTAACAACCACTCTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTATTTCTGCTCTTCCTGAGCTCATTACTGGTAACAACCACTCTAA  349

seq1  AAACCTGTTTCTGCCAGAGCACAGTAAAGGACACACCCTTGTGAAACCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTTTCTGCCAGAGCACAGTAAAGGACACACCCTTGTGAAACCTC  399

seq1  CAGCATGAGCTATAGGAAAGGTCCAGTCAGTCTCCTGCCTGCTGAGATCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGAGCTATAGGAAAGGTCCAGTCAGTCTCCTGCCTGCTGAGATCT  449

seq1  CTATTCAATCTGGTCAGCAAAATACCTTAGTGTAGCATAGAGACACTTAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAATCTGGTCAGCAAAATACCTTAGTGTAGCATAGAGACACTTAG  499

seq1  GGATTGGCTTGCCAGACCCTATGCAATCACTGAGCAGTAAGCACCCCCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGCTTGCCAGACCCTATGCAATCACTGAGCAGTAAGCACCCCCCC  549

seq1  CCAAACTTTCCAGTGGCTCTTGCTGCACACCTAAAGCATACTTCAGTAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTTTCCAGTGGCTCTTGCTGCACACCTAAAGCATACTTCAGTAAT  599

seq1  CATTTTAAATCATTGAGATCTGTGACGGCCATTCTTGGCTGTCAACTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAATCATTGAGATCTGTGACGGCCATTCTTGGCTGTCAACTGAA  649

seq1  CCCCAAGCAGCTAGGGACACCTATGGGAGGAATTTCTTCTTGATTTAAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGCAGCTAGGGACACCTATGGGAGGAATTTCTTCTTGATTTAAGT  699

seq1  CATTTAAAGTAGAAAGACTTACTTTCAGTCTGGATCTTTTGAGGTGGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAGTAGAAAGACTTACTTTCAGTCTGGATCTTTTGAGGTGGAAA  749

seq1  AAAAATATACCTTTATTTTGACCCACATCTTCTGATGGCGGCCTATATAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATACCTTTATTTTGACCCACATCTTCTGATGGCGGCCTATATAA  799

seq1  AGGACATGGAAGAAGGAAGCTTTTTTCCCTTTGCCTGCTTGCTCTCACTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGGAAGAAGGAAGCTTTTTTCCCTTTGCCTGCTTGCTCTCACTA  849

seq1  GCAGCTCCATTCCTTCACTGGCATTAGAGCCTTCTTCTTCAGAATTC  896
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCCATTCCTTCACTGGCATTAGAGCCTTCTTCTTCAGAATTC  896

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Alignment Information