BAC Information

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BAC

Clone NameB6Ng01-299A21
Chromosome9 (Build37)
Map Location 11,967,852 - 11,969,011
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039989
Downstream geneLOC622505, LOC100039680, LOC665285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299A21.bB6Ng01-299A21.g
ACCGA094001GA094002
length1,162948
definitionB6Ng01-299A21.b B6Ng01-299A21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcatactctttccaataaggttaaaaaaacacaagaagatttg
atataaagagatcaactttctttaaattgaaatatctacataaacaactc
aggcttccaatggcaattgttggaggtctcttggctgtgtttcctattga
agtactatacacaattttctgtttcatttagcaaggcagagctattatta
aaaaggaattctcaattctccaagtgcaaatagaataattgaaactcaag
tcatataatgctattctaaatgcattcctaagtgttcttttgagattatt
cagtatgtttaagcctagaatatacttgtaataaacccagatatttcaat
agcaactttgttttcacattaagaagaaacaaaactccaccttaaattca
ttcattcacttgccagcatctcttggccatgaattaaaagttgtacaatt
ggtcattttccccaagagaattcttaaagtaaggtatgtttcaacagtta
agatattctgctgaatatctgaatatctactgaacagaaagatattctac
tggtgaagatatcaccatcatgtttcttatttaatatcacatattaagtc
actacccctagtttactttttcttaatggccctcgagttgtccaacctgt
tttcatgaactcctcagtaaaccacacatgaagatctcagctactgaaaa
ggagcaacctgagctaagtagcccacactggttggtcatcagaagctaat
ggtgatggttgcttgaaaatgtagtaagaccatgataagacatgtgaaat
tgcaattctttcagctcagcctgccagttcctaagtatgtattagcactt
gggaggaatttttaaaaagataatgatgagagaaaataacctttcaaatg
atggctgctacaattttaaagaataattcattggcaatgaagctttcaaa
agatgctgcagtgtatatcataggagcacaaacttctattattagagagt
tgtaagaaaatatttcccaggaatgtggggctccacctgaacagggacca
agtcatttaccgcccaggatgatcataaccactgcctattgttgtgccgc
tggcgacaccagacctgatcaataagcttgcaatgcttttgttttaagga
atgtaagccttt
gaattccagtacaaaatttaataggtagggagagaatgggcagccttatc
tagtccctgattttagtgggattgcttcatatttctctccatttagtttg
atgttggctattggtttgctgtatattgcttttactatgtttagatacag
gacttaaatgcctgatcttccctagacttttaccatgaagcggtgttgaa
ttttgccaaatgctttctcagcttctaatgagattatcatgtggattttt
tccctctgaatttgtttatgtagtgattatgtagttgtatttctgagtat
tgaaccttctctgcatcctgggacgaaatctacttgatcatgatgaacca
tggttgtgatgtgttcctggatctcgtttgtgagaattttatttttgcat
tgatattaataagggaaattggtctgaagttctcatcctttgttggatct
ttgtgtggtttaggtataagcatagctgtaacttcataggatgaattggg
tagtgttccttctctttctattttgtgaaatagtttgaaaggtattggta
ttaggtcttctttgaggtctgatagaattctgtactaaaaccatcttttt
tttttttttttttttttttttttttgttaggagacttttaataaatgctt
ctatttctttaggggacatgggactatttagatggtttttctgatcctga
tttaactttggctcctgcctagaaaattttccatttcagccaacttttcc
agttttgttgagtagaggcttttgtagtaggaactgatgacttggttgaa
tttcttgggttttgtttttatgtttcctttattgtgatttgttaaattgg
atactgtctctgtgcagcgtttttttctgactagtgttatctagtgtggg
ttttccaagaaccagctacttgtttttgatctgatagatgatgtcgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_11967852_11969011
seq2: B6Ng01-299A21.b_44_1205 (reverse)

seq1  AAAGGCTT-CATTTCCTAAAACAAAAGCATGTGGCAGGTTTTATTGATCA  49
      |||||||| |||| | |||||||||||||  | ||| |  ||||||||||
seq2  AAAGGCTTACATTCCTTAAAACAAAAGCA--TTGCAAG-CTTATTGATCA  47

seq1  GGTCT-GTGTCGCCAGCTGCAC-ACATTA-GCAGTGGTTATTGATCACTC  96
      ||||| ||||||||||| |||| ||| || |||||||||| ||||||  |
seq2  GGTCTGGTGTCGCCAGCGGCACAACAATAGGCAGTGGTTA-TGATCATCC  96

seq1  T-GGCGGT-AATGACTTGGGTTCCCTG-TCAGGTGGAG-CCCACATTCCT  142
      | |||||| ||||||||||  |||||| |||||||||| |||||||||||
seq2  TGGGCGGTAAATGACTTGG--TCCCTGTTCAGGTGGAGCCCCACATTCCT  144

seq1  GGGAAATATTTTCTTACAACTCTCTAAT-ATAGAAGTTTGTGCTCCCTAT  191
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  GGGAAATATTTTCTTACAACTCTCTAATAATAGAAGTTTGTGCT-CCTAT  193

seq1  GATATACACTGCAGCATCTTTTGAAAGCTTCATTGCCAATGAATTATTCT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACACTGCAGCATCTTTTGAAAGCTTCATTGCCAATGAATTATTCT  243

seq1  TTAAAATTGTAGCAGCCATCATTTGAAAGGTTATTTTCTCTCATCATTAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTGTAGCAGCCATCATTTGAAAGGTTATTTTCTCTCATCATTAT  293

seq1  CTTTTTAAAAATTCCTCCCAAGTGCTAATACATACTTAGGAACTGGCAGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAAATTCCTCCCAAGTGCTAATACATACTTAGGAACTGGCAGG  343

seq1  CTGAGCTGAAAGAATTGCAATTTCACATGTCTTATCATGGTCTTACTACA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGAAAGAATTGCAATTTCACATGTCTTATCATGGTCTTACTACA  393

seq1  TTTTCAAGCAACCATCACCATTAGCTTCTGATGACCAACCAGTGTGGGCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGCAACCATCACCATTAGCTTCTGATGACCAACCAGTGTGGGCT  443

seq1  ACTTAGCTCAGGTTGCTCCTTTTCAGTAGCTGAGATCTTCATGTGTGGTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCTCAGGTTGCTCCTTTTCAGTAGCTGAGATCTTCATGTGTGGTT  493

seq1  TACTGAGGAGTTCATGAAAACAGGTTGGACAACTCGAGGGCCATTAAGAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGAGTTCATGAAAACAGGTTGGACAACTCGAGGGCCATTAAGAA  543

seq1  AAAGTAAACTAGGGGTAGTGACTTAATATGTGATATTAAATAAGAAACAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAACTAGGGGTAGTGACTTAATATGTGATATTAAATAAGAAACAT  593

seq1  GATGGTGATATCTTCACCAGTAGAATATCTTTCTGTTCAGTAGATATTCA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGATATCTTCACCAGTAGAATATCTTTCTGTTCAGTAGATATTCA  643

seq1  GATATTCAGCAGAATATCTTAACTGTTGAAACATACCTTACTTTAAGAAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCAGCAGAATATCTTAACTGTTGAAACATACCTTACTTTAAGAAT  693

seq1  TCTCTTGGGGAAAATGACCAATTGTACAACTTTTAATTCATGGCCAAGAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGGGAAAATGACCAATTGTACAACTTTTAATTCATGGCCAAGAG  743

seq1  ATGCTGGCAAGTGAATGAATGAATTTAAGGTGGAGTTTTGTTTCTTCTTA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGCAAGTGAATGAATGAATTTAAGGTGGAGTTTTGTTTCTTCTTA  793

seq1  ATGTGAAAACAAAGTTGCTATTGAAATATCTGGGTTTATTACAAGTATAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAACAAAGTTGCTATTGAAATATCTGGGTTTATTACAAGTATAT  843

seq1  TCTAGGCTTAAACATACTGAATAATCTCAAAAGAACACTTAGGAATGCAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCTTAAACATACTGAATAATCTCAAAAGAACACTTAGGAATGCAT  893

seq1  TTAGAATAGCATTATATGACTTGAGTTTCAATTATTCTATTTGCACTTGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATAGCATTATATGACTTGAGTTTCAATTATTCTATTTGCACTTGG  943

seq1  AGAATTGAGAATTCCTTTTTAATAATAGCTCTGCCTTGCTAAATGAAACA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAGAATTCCTTTTTAATAATAGCTCTGCCTTGCTAAATGAAACA  993

seq1  GAAAATTGTGTATAGTACTTCAATAGGAAACACAGCCAAGAGACCTCCAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGTGTATAGTACTTCAATAGGAAACACAGCCAAGAGACCTCCAA  1043

seq1  CAATTGCCATTGGAAGCCTGAGTTGTTTATGTAGATATTTCAATTTAAAG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCCATTGGAAGCCTGAGTTGTTTATGTAGATATTTCAATTTAAAG  1093

seq1  AAAGTTGATCTCTTTATATCAAATCTTCTTGTGTTTTTTTAACCTTATTG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGATCTCTTTATATCAAATCTTCTTGTGTTTTTTTAACCTTATTG  1143

seq1  GAAAGAGTATGATGAATTC  1160
      |||||||||||||||||||
seq2  GAAAGAGTATGATGAATTC  1162