BAC Information

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BAC

Clone NameB6Ng01-299J06
Chromosome9 (Build37)
Map Location 109,467,179 - 109,467,809
singlet/doubletsinglet
Overlap geneFbxw15
Upstream geneImpdh2, 4733401H18Rik, Dalrd3, Wdr6, 4933406E20Rik, Arih2, ENSMUSG00000074075, Slc25a20, Prkar2a, Ihpk2, Nckipsd, Celsr3, Slc26a6, LOC100038959, Tmem89, Uqcrc1, Col7a1, Pfkfb4, Scotin, Trex1, 6620401K05Rik, Ccdc72, Ccdc51, EG665413, Plxnb1, E330009P21Rik, Fbxw13, Fbxw12, Fbxw14, LOC668758, EG382156, Fbxw16, Fbxw19, LOC635668
Downstream geneEG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1, Rn4.5s-ps2, Cspg5, Tmem103, Scap, Ptpn23, Ngp, Klhl18, Kif9, Setd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299J06.bB6Ng01-299J06.g
ACCGA094381GA094382
length6311,206
definitionB6Ng01-299J06.b B6Ng01-299J06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgatttcatcattttgttgctggtgatgatgagacaggatcccc
ctgtacagacctggctgtcccgaagtccctagatagatccatttatcttg
gattccaatgtgctttggtcaaagatttgcactatcacacctgatttccc
cacttcttacttttttatctttagatttaattgatttctatgtaaaagta
ttttctgtgtatatatgtatgtgtaacccatgtgtgtatgctacctgtgg
acgtcacaagagggtgtcaggccccttaaaaactgtagttgcagatgatt
gtaagctgtgggcactgaactcaggtcctctgctaagccatctctgaaag
gcctgtcagtgtttcaaggttttcatcatatattgttctcctacaaggtg
gggtttactcctaggtattctttttgaagatatatttttgattttatata
tgtgtgtgtctgtgttagtttatggttggtgcccactgacagaggccaga
ggctgtgaggtgttctgtaggtattgggaacccaattagggttctctgca
agaacgttattgctctgtactgctgaacaatcactctgaccccttactcc
agggtttgtttgttggtggtgtgtttttgtt
gaattcaagaaggtagactccagaaaatcaaataatcccattaaaaatgg
ggctcagagctaaacaaagtattctcacctgaggaatacggaatggctga
gaagcacctgataaaatgttcagcatctttagtcatcagggaaatgcaaa
tcaaaacaaccctgagattccacctcacaccagtcagaatggctaagatt
taaaattcaggtgacagcagatgctggtgaggacgtggagaaagaggaat
actcctccattgtttttgggattgcaagcttgtacaaccactctggaaat
cagtctggcggttcctcagaaaattggacatagtactaccggaggatcct
gcaatacctttcctgggcatatatccagaagatgttccaactggtaagaa
ggacacatgcttcactatgttcatagcagccttatttataatagccagaa
gctggaaagaacccatatgcccctcaacagaggaatggatacagaaaatg
tggtacatttacactgtggagtactactcagctactaaaaagaatgaact
tatgaaattcttaggtaaatggatggacctggagggcatcatcctgagtg
aagtaacccaatcacaaaagaacccaccagatatgtactcacttataagt
ggatattagctcagaaacgtagaatacccaagatataatttgcaaaacac
atgaaactcaagaagaatgaagaccaaagtgtggacactttgccccttct
tagaattgggaacaaaactcccatggaaaggagttacagagacacatttt
ggagctgagacaaatggatggaccatccagagattgccataccctgggat
ccatcccataatcagccaccaaacgctgacaccattgcatactcttgcaa
gattttgctgaaaggaccttgatataactgtctcttgtgaggcttatgct
ggggccctatcaaaaaacagaaagtggatgctcatagtcagctatttgga
atgggatcacaattgtcccccattggaggagctagaggaagtaccccaag
aagctaaggggatcctgcaacctatagttgcaacaacaattatggagtta
caagttaacctccgcagcttgggttctctagcctgcataatgttattaca
gagagaattggtcctagattccaagcacaattcattttgggtaaaagaga
gaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_109467179_109467809
seq2: B6Ng01-299J06.b_43_673 (reverse)

seq1  AACAAAAACACACCACCAACAAACAAACCCTGGAGTAAGGGGTCAGAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACACACCACCAACAAACAAACCCTGGAGTAAGGGGTCAGAGTG  50

seq1  ATTGTTCAGCAGTACAGAGCAATAACGTTCTTGCAGAGAACCCTAATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCAGCAGTACAGAGCAATAACGTTCTTGCAGAGAACCCTAATTGG  100

seq1  GTTCCCAATACCTACAGAACACCTCACAGCCTCTGGCCTCTGTCAGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAATACCTACAGAACACCTCACAGCCTCTGGCCTCTGTCAGTGGG  150

seq1  CACCAACCATAAACTAACACAGACACACACATATATAAAATCAAAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACCATAAACTAACACAGACACACACATATATAAAATCAAAAATAT  200

seq1  ATCTTCAAAAAGAATACCTAGGAGTAAACCCCACCTTGTAGGAGAACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAAAAAGAATACCTAGGAGTAAACCCCACCTTGTAGGAGAACAAT  250

seq1  ATATGATGAAAACCTTGAAACACTGACAGGCCTTTCAGAGATGGCTTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGAAAACCTTGAAACACTGACAGGCCTTTCAGAGATGGCTTAGC  300

seq1  AGAGGACCTGAGTTCAGTGCCCACAGCTTACAATCATCTGCAACTACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACCTGAGTTCAGTGCCCACAGCTTACAATCATCTGCAACTACAGT  350

seq1  TTTTAAGGGGCCTGACACCCTCTTGTGACGTCCACAGGTAGCATACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGGGCCTGACACCCTCTTGTGACGTCCACAGGTAGCATACACAC  400

seq1  ATGGGTTACACATACATATATACACAGAAAATACTTTTACATAGAAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTACACATACATATATACACAGAAAATACTTTTACATAGAAATCA  450

seq1  ATTAAATCTAAAGATAAAAAAGTAAGAAGTGGGGAAATCAGGTGTGATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCTAAAGATAAAAAAGTAAGAAGTGGGGAAATCAGGTGTGATAG  500

seq1  TGCAAATCTTTGACCAAAGCACATTGGAATCCAAGATAAATGGATCTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATCTTTGACCAAAGCACATTGGAATCCAAGATAAATGGATCTATC  550

seq1  TAGGGACTTCGGGACAGCCAGGTCTGTACAGGGGGATCCTGTCTCATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACTTCGGGACAGCCAGGTCTGTACAGGGGGATCCTGTCTCATCAT  600

seq1  CACCAGCAACAAAATGATGAAATCAGAATTC  631
      |||||||||||||||||||||||||||||||
seq2  CACCAGCAACAAAATGATGAAATCAGAATTC  631