BAC Information

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BAC

Clone NameB6Ng01-299N21
Chromosome9 (Build37)
Map Location 16,400,468 - 16,401,037
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc67, LOC665461, LOC330891, Slc36a4, Mtnr1b, Fat3
Downstream geneEG434373, LOC100040074, LOC100040090
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299N21.bB6Ng01-299N21.g
ACCGA094592GA094593
length5641,199
definitionB6Ng01-299N21.b B6Ng01-299N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgaaaacttcacaatccactcttgatgatgatgatggtggtgaagatgat
aatgattatagttattaaagctaacatacaaagcacagaattccattatg
gcatctttatatacacacgcatcatcatcattatttctatttacctctct
tctctgctgccaacctctgtcccttctactcgagtcctgttggccatctt
cctcacctccagtagacatcatttctgtttccatgtacttttatttattt
attttctaaagacagacctgatattgtagaaggtccaggcctttgttgcc
ggccttcatgtatgccttgctgtggacaagaatggaggagctagagaaag
tacccaaggagctaaagggaactgcaaccctataggtggaaaaacactat
gaactaaccagtaccccggagctcttgactctagctgcatatgtatcaaa
agatggcctagtcagccatcactggaaagagaggccctttggacacgcaa
actttatatgccctagtacaggggaacgccagggccaaaaagggggagtg
ggtgggtaggggag

gaattcctcacattaaatgttgctcattaccagttggggcatcttctgga
tatatgcccaggagaggtattgctggatcctccggtagtactatgtccaa
ttttctgaggaaccgccagactgatttccagagtggttgtacaagcctgc
actcccaccaacaatggaggagtgttcctctttctccacatccacgccag
catctgctgtcacctgaattttttatcttagccattctgactggtgtgag
gtggaatctcagggttgttttgatttgcatttccctgatgattaaggatg
ttgaacattttttcaggtgcttctctgccattcggtattcctcaggtgag
aattctttgttcagttctgagccccatttttaatggggttatttgatttt
ctgaagtccaccttcttgagttctttatatatgttggatattagtcccct
atctgatttaggataggtaaagatcctttcccaacctgttggtggtcttt
ttgtcttattgatggtgtcttttgccttgcagaaactttggagtttcatt
aggtcccatttgtcaattctcgatcttacagcacatgctccactatgttc
atagcagccttatttataatagccagaagctggaaagaacccagatgccc
ctcaacagaggaatggatacagaaaatgtggtacatctacacaatggagt
actactcagctattaaaaagaatgaatttatgaaattcctagccaaatgg
atggacctggagggcatcattctgagtgaggtaacacattcataaaggaa
ctcacacaatatgtactcactgataagtggatattagcccaaaacctagg
atacccaagatataagatacaatttcctaaacacatgaaactcaagaaaa
atgaagactgaagtgtggacactatgcccctccttagaagtgggaacaaa
acacccttggaaagagttacagagacaaaagtttgggagctgagatgaaa
ggatgacatgtagagaactgcattattccaaggattccacccattatcag
cattcaacgctggacacatgccataccctaagaagaatttaatcgaaaga
actcaaatgttaactgttctcttgtgagacatgcacgcctagccaaacca
gattggatgcctcaccagttcatgacctctattatgtgatatgagtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_16400468_16401037
seq2: B6Ng01-299N21.b_46_615

seq1  GAATTCTGAAAACTTCACAATCCACTCTTGATGATGATGATGGTGGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAAACTTCACAATCCACTCTTGATGATGATGATGGTGGTGAA  50

seq1  GATGATAATGATTATAGTTATTAAAGCTAACATACAAAGCACAGAATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAATGATTATAGTTATTAAAGCTAACATACAAAGCACAGAATTCC  100

seq1  ATTATGGCATCTTTATATACACACGCATCATCATCATTATTTCTATTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGCATCTTTATATACACACGCATCATCATCATTATTTCTATTTAC  150

seq1  CTCTCTTCTCTGCTGCCAACCTCTGTCCCTTCTACTCGAGTCCTGTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCTCTGCTGCCAACCTCTGTCCCTTCTACTCGAGTCCTGTTGGC  200

seq1  CATCTTCCTCACCTCCAGTAGACATCATTTCTGTTTCCATGTACTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCTCACCTCCAGTAGACATCATTTCTGTTTCCATGTACTTTTAT  250

seq1  TTATTTATTTTCTAAAGACAGACCTGATATTGTAGAAGGTCCAGGCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTCTAAAGACAGACCTGATATTGTAGAAGGTCCAGGCCTTT  300

seq1  GTTGCCGGCCTTCATGTATGCCTTGCTGTGGACAAGAATGGAGGAGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCGGCCTTCATGTATGCCTTGCTGTGGACAAGAATGGAGGAGCTAG  350

seq1  AGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAAAAA  400

seq1  CACTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGT  450

seq1  ATCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCTTTGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAGATGGCCTAGTCAGCCATCACTGGAAAGAGAGGCCCTTTGGAC  500

seq1  ACGCAAACTTTATATGCCCTAGTACAGGGGAACGCCAGGGCCAAAAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAAACTTTATATGCCCTAGTACAGGGGAACGCCAGGGCCAAAAAGGG  550

seq1  GGAGTGGGTGGGTAGGGGAG  570
      ||||||||||||||||||||
seq2  GGAGTGGGTGGGTAGGGGAG  570


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