BAC Information

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BAC

Clone NameB6Ng01-303A18
Chromosome9 (Build37)
Map Location 11,092,743 - 11,093,814
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn5, LOC665154, LOC100039970, LOC665178
Downstream geneLOC100039989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303A18.bB6Ng01-303A18.g
ACCGA096942GA096943
length1,1901,070
definitionB6Ng01-303A18.b B6Ng01-303A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttctccgcatctaaccagatgatcatgtggtttttgtattt
gagtttgtttatataatggattaccttgatgtatttctgtatattaaacc
atccctgcatcgctggaataaaacctacttggtcagaatggatgattctt
ttaatgtgttcttggattcagttagcaagtattttgttgagtatttttgc
atagatattcataaggtaattggtctgaagttctctatctttgttggatc
tttctgtggtttaggtatcagagtaattgtggtttcatagactgagttgg
gtagagtaccttctacttctattttgtggaatattttgtgaagaactgga
aatagatcttctttgacggtctgatagaactctgcactaaacccatctgg
tcctgagctctttttggctgggagactattaatgactgcttctatttctt
taggggatatgggactgtttagatcattaacttgatcctggtttaacttt
ggtacctggtatctgtctagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaagggtcttatggtgttttggattt
cttcaggatctgttgttatctctcccttttcatttctgatttcattaatt
aggatgctgtcactgtgccctctagtgagtctggctaagggtttatctat
cttgttgattttctcaaagaaccagctcctcatttggtggattctttgaa
tagttcttcttgtttccacctggttgattttgcccctgagttcgattatt
tcctgcaatctactcctcttgggtgaatttgcttccttttttttctagag
cttttagtgtgttgtcaagctgctagtgtgtactctctctagtatctttt
ggaggcactcagagctataagtttccctcttagaatgctttcctagtgtc
cataagttagggtaagttgcgtctcagtttcattaaactccaaaaagtct
ttatttctttcttattccttcgctgaacaaagggattcattgagaagaga
ggctggtcgttccacgtgaatgttgggcttccataattatgttgtgatga
gaagtacacgcctaatctcacgtggtgggttcctgagtat
gaattccaagagaaggctgtgtaacccacgagataatgttactagagaga
cttcactgttgaatacagtttgcctctgcacttcccgaccctgatccccc
tccccagaagctcccatcctccctgcagcactaagtaagcaagatatgca
gatagctgggttctgtgctgcatcttccttcaccagccatgggctcccta
ccccttccctaaagttagaatggcactaaccataaaattccccttaatga
agactttttgaggagacttcctcccagcctcaaaataacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaaaacattactgctgataa
gcagcaaaactccaggtacctgtccttgagaccttagagaaataacaagc
tcaagggagaccatgtaaaaaaggtaaacagaggtcagatcacagacagt
aaaaattaatccttgaacagacatccattaacccacctcccgcttcatct
gggtttcccgtgaattcggggcacaacagaggctaagcgcttgtcacgtt
taaataagagacagcaaccagagtagttgatgtagagcaagatcaaagat
aaatgggtaatcaaatgacataatgacttttcaattactgtggatgagac
aaacatttctttgatgatatttcaacagatgaatgatatgatgtaactta
tgttgttaaagtaccattatatgagccatataaaacaaaattgcatcatg
aaggaaatggtgaaatcaggaagatcataccttgaagcagttgaagtaac
taaggcaagggttatggtcatttataccatgcttataatagcagcaataa
tgagtagttattggcaataaagatttgattatagtaacatgatacacatg
tgtaaatgatcctaaccaagctcatcattttatacaatgaagatatatca
ataatattatcatttgtaaataaatttaaagggaagtaatttgatttgat
attaaacaaatattagagagagattcttttattgttctgcacttgcccca
atggctactctcactgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_11092743_11093814
seq2: B6Ng01-303A18.g_64_1133 (reverse)

seq1  ATATCAGTGAGAGTAACCA-TGGGGCAAGTGCAGAAC-ATAAAAGAATCT  48
      ||||||||||||||| ||| ||||||||||||||||| ||||||||||||
seq2  ATATCAGTGAGAGTAGCCATTGGGGCAAGTGCAGAACAATAAAAGAATCT  50

seq1  CTCTTCTAATATTTGTTTAATATTCAAATTCAATTTACTT-CCTTTAAAT  97
      ||| |||||||||||||||||| ||||| |||| |||||| |||||||||
seq2  CTC-TCTAATATTTGTTTAATA-TCAAA-TCAAATTACTTCCCTTTAAAT  97

seq1  TTATTTTACAAATGATAATATTATTGATATATCTTCATTGTATAAAATGA  147
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTA-TTTACAAATGATAATATTATTGATATATCTTCATTGTATAAAATGA  146

seq1  TGAGCTTGGTTAGGATCATTTTACACATGTGTATCATGTTACTATAATCA  197
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGAGCTTGGTTAGGATCA-TTTACACATGTGTATCATGTTACTATAATCA  195

seq1  AATCTTTATTGCCAATAACTACTCATTATTGCTGCTATTATAAGCATGGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATTGCCAATAACTACTCATTATTGCTGCTATTATAAGCATGGT  245

seq1  ATAAATGACCATAACCCTTGCCTTAGTTACTTCAACTGCTTCAAGGTATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGACCATAACCCTTGCCTTAGTTACTTCAACTGCTTCAAGGTATG  295

seq1  ATCTTCCTGATTTCACCATTTCCTTCATGATGCAATTTTGTTTTATATGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTGATTTCACCATTTCCTTCATGATGCAATTTTGTTTTATATGG  345

seq1  CTCATATAATGGTACTTTAACAACATAAGTTACATCATATCATTCATCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATAATGGTACTTTAACAACATAAGTTACATCATATCATTCATCTG  395

seq1  TTGAAATATCATCAAAGAAATGTTTGTCTCATCCACAGTAATTGAAAAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATCATCAAAGAAATGTTTGTCTCATCCACAGTAATTGAAAAGT  445

seq1  CATTATGTCATTTGATTACCCATTTATCTTTGATCTTGCTCTACATCAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGTCATTTGATTACCCATTTATCTTTGATCTTGCTCTACATCAAC  495

seq1  TACTCTGGTTGCTGTCTCTTATTTAAACGTGACAAGCGCTTAGCCTCTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGGTTGCTGTCTCTTATTTAAACGTGACAAGCGCTTAGCCTCTGT  545

seq1  TGTGCCCCGAATTCACGGGAAACCCAGATGAAGCGGGAGGTGGGTTAATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCCGAATTCACGGGAAACCCAGATGAAGCGGGAGGTGGGTTAATG  595

seq1  GATGTCTGTTCAAGGATTAATTTTTACTGTCTGTGATCTGACCTCTGTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTGTTCAAGGATTAATTTTTACTGTCTGTGATCTGACCTCTGTTT  645

seq1  ACCTTTTTTACATGGTCTCCCTTGAGCTTGTTATTTCTCTAAGGTCTCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTTTACATGGTCTCCCTTGAGCTTGTTATTTCTCTAAGGTCTCAA  695

seq1  GGACAGGTACCTGGAGTTTTGCTGCTTATCAGCAGTAATGTTTTGTTGTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTACCTGGAGTTTTGCTGCTTATCAGCAGTAATGTTTTGTTGTT  745

seq1  GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTTTGAGGCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTTTGAGGCT  795

seq1  GGGAGGAAGTCTCCTCAAAAAGTCTTCATTAAGGGGAATTTTATGGTTAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAGTCTCCTCAAAAAGTCTTCATTAAGGGGAATTTTATGGTTAG  845

seq1  TGCCATTCTAACTTTAGGGAAGGGGTAGGGAGCCCATGGCTGGTGAAGGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCTAACTTTAGGGAAGGGGTAGGGAGCCCATGGCTGGTGAAGGA  895

seq1  AGATGCAGCACAGAACCCAGCTATCTGCATATCTTGCTTACTTAGTGCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGCACAGAACCCAGCTATCTGCATATCTTGCTTACTTAGTGCTG  945

seq1  CAGGGAGGATGGGAGCTTCTGGGGAGGGGGATCAGGGTCGGGAAGTGCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGATGGGAGCTTCTGGGGAGGGGGATCAGGGTCGGGAAGTGCAG  995

seq1  AGGCAAACTGTATTCAACAGTGAAGTCTCTCTAGTAACATTATCTCGTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAACTGTATTCAACAGTGAAGTCTCTCTAGTAACATTATCTCGTGG  1045

seq1  GTTACACAGCCTTCTCTTGGAATTC  1072
      |||||||||||||||||||||||||
seq2  GTTACACAGCCTTCTCTTGGAATTC  1070