BAC Information

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BAC

Clone NameB6Ng01-305B21
Chromosome9 (Build37)
Map Location 29,892,642 - 29,893,810
singlet/doubletsinglet
Overlap genenone
Upstream geneHnt
Downstream geneSnx19, LOC666478, Adamts15, Adamts8, Zbtb44, BC038156
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305B21.bB6Ng01-305B21.g
ACCGA098489GA098490
length1,1571,004
definitionB6Ng01-305B21.b B6Ng01-305B21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagcatcagaaagggccatctctgagaacccatgaagagctgga
gaaagctttcaaagactttaagtggacaaatgcggtacctggttcctgaa
agggaagaaagatcatgactcgacaagctagagattaataacaacacata
atttgcctgcgaaaaagactctgaaatcaagagagattcaattaggagaa
aagcttcagggtattgagtaaaaactaacgtggcactaaaaggagccagt
catatctcacacatcctgttcacttccatcaaaaggtttatggtaaacct
tatggcaatggtgtgacaataaacatattatggctcacccacaagaaggc
tgttggctctgccccatgtgacatgtccataaataagctaagaaaatatc
acctaggaaactgcaccacaagataggtagtctcaaatggtgatgataaa
cagttatacctctgacagcctaaggaagacagaagaggggaatggcctag
gaatcagtcatgagtcttgaggtgtgtggagtctccaccaatggactaga
tcagaaaaatcagtttgaaggccaggtttactaagtcacacacaaaactg
aaagtgtaatgtacaccttactctactgagcaggcatgcatttctctaca
ttttaactgagtatgaaaggaaagattgacagtggacatgggttaggttt
taataaggacagtgacatctgatctttctctcaccatttgaccgaactcc
tggaaattgggtgccaaggacatcttcccttgaatgagaggctaggcaga
aaacagttacttggttctgggttgtgagacccctgttttctcttctgtgt
aatggggcaatggctcccttacaggatgagcaatatttatgtgactaaga
ttattaaagatcatctgggggttttgaaaatgcaagcacagtgtataagc
taagtattatgaacggcaaagatctctacttgcaggaaatgggagagagg
gtacaggagacagacagagtacacagggagcagttattagccagtctggg
gagaacatagtggggcttgggcatcttccaaacatctgtgtattcaagtc
atcctctgctcctctagtcattgaagagggaagcttgagaagaagcagct
gctgtct

gaattcacttcatgtgtaaagaaatgtggcagaaaccatagaggatgctg
ttttttttttttaatggatattttctttatttacatttcacatattatcc
catttcctggtttcctctctgcaacgaccctatcccatctccttactctg
catctatgagggtgcttctctaccctcccacccactcctgcctcactgcc
ctaaggtacctctacactgggccatcaagccttcataggaccaagggcct
ccccttccattgatgccagataaggccccttcagcttcttcagtcattcc
cctaacttctccattggaatccctgtcctcagtccagtggttggctgtga
gcctccacatctgtattggtcaggatctggctgagcccctcaggagacag
ctgtatcaggctcttgtcagcaagcacttcttgacatcagcaatagtgtc
taggtttggtgtctgcatgtgggatggatccccaggtgggtcagtctctg
gatggcctttccttcagtctctgttccactctttgttcctgtactacctt
tagaaagtagcaattctgggttaaaattttggagatgggtgggtagcccc
atccctcaacagaggtggggcatacctaacctctggatgtggtcgccaca
ggttctccctcccctttgtggggtagtctagctaatgtcagacctgtggg
gtcctgggaggctcttgctttcctggcacctggttgctacccccagttcc
ccatccccattgctggttggcaggcaggctaatgctcaactaactttgtg
acatagtcaggaccttctgcttagggaatggtgttcctcacaattggact
ggaattttcctatatcaattaaaaaagattatccccacagatattcccac
aggccaacctgatctaggcatctcctttactaggaaggtgctcttttcag
tgattaataggctgttgggaagttggcagttaaagctaaccaggacaagg
acca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_29892642_29893810
seq2: B6Ng01-305B21.b_52_1208

seq1  GAATTCTAGCATCAGAAAGGGCCATCTCTGAGAACCCATGAAGAGCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCATCAGAAAGGGCCATCTCTGAGAACCCATGAAGAGCTGGA  50

seq1  GAAAGCTTTCAAAGACTTTAAGTGGACAAATGCGGTACCTGGTTCCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTTTCAAAGACTTTAAGTGGACAAATGCGGTACCTGGTTCCTGAA  100

seq1  AGGGAAGAAAGATCATGACTCGACAAGCTAGAGATTAATAACAACACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGAAAGATCATGACTCGACAAGCTAGAGATTAATAACAACACATA  150

seq1  ATTTGCCTGCGAAAAAGACTCTGAAATCAAGAGAGATTCAATTAGGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTGCGAAAAAGACTCTGAAATCAAGAGAGATTCAATTAGGAGAA  200

seq1  AAGCTTCAGGGTATTGAGTAAAAACTAACGTGGCACTAAAAGGAGCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAGGGTATTGAGTAAAAACTAACGTGGCACTAAAAGGAGCCAGT  250

seq1  CATATCTCACACATCCTGTTCACTTCCATCAAAAGGTTTATGGTAAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTCACACATCCTGTTCACTTCCATCAAAAGGTTTATGGTAAACCT  300

seq1  TATGGCAATGGTGTGACAATAAACATATTATGGCTCACCCACAAGAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAATGGTGTGACAATAAACATATTATGGCTCACCCACAAGAAGGC  350

seq1  TGTTGGCTCTGCCCCATGTGACATGTCCATAAATAAGCTAAGAAAATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTCTGCCCCATGTGACATGTCCATAAATAAGCTAAGAAAATATC  400

seq1  ACCTAGGAAACTGCACCACAAGATAGGTAGTCTCAAATGGTGATGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGAAACTGCACCACAAGATAGGTAGTCTCAAATGGTGATGATAAA  450

seq1  CAGTTATACCTCTGACAGCCTAAGGAAGACAGAAGAGGGGAATGGCCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATACCTCTGACAGCCTAAGGAAGACAGAAGAGGGGAATGGCCTAG  500

seq1  GAATCAGTCATGAGTCTTGAGGTGTGTGGAGTCTCCACCAATGGACTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGTCATGAGTCTTGAGGTGTGTGGAGTCTCCACCAATGGACTAGA  550

seq1  TCAGAAAAATCAGTTTGAAGGCCAGGTTTACTAAGTCACACACAAAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAATCAGTTTGAAGGCCAGGTTTACTAAGTCACACACAAAACTG  600

seq1  AAAGTGTAATGTACACCTTACTCTACTGAGCAGGCATGCATTTCTCTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTAATGTACACCTTACTCTACTGAGCAGGCATGCATTTCTCTACA  650

seq1  TTTTAACTGAGTATGAAAGGAAAGATTGACAGTGGACATGGGTTAGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTGAGTATGAAAGGAAAGATTGACAGTGGACATGGGTTAGGTTT  700

seq1  TAATAAGGACAGTGACATCTGATCTTTCTCTCACCATTTGACCGAACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGGACAGTGACATCTGATCTTTCTCTCACCATTTGACCGAACTCC  750

seq1  TGGAAATTGGGTGCCAAGGACATCTTCCCTTGAATGAGAGGCTAGGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTGGGTGCCAAGGACATCTTCCCTTGAATGAGAGGCTAGGCAGA  800

seq1  AAACAGTTACTTGGTTCTGGGTTGTGAGACCCCTGTTTTCTCTTCTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTTACTTGGTTCTGGGTTGTGAGACCCCTGTTTTCTCTTCTGTGT  850

seq1  AATGGGGCAATGGCTCCCTTACAGGATGAGCAATATTTATGTGACTAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGCAATGGCTCCCTTACAGGATGAGCAATATTTATGTGACTAAGA  900

seq1  TTATTAAAGATCATCTGGGGGTTTTGAAAATGCAAAGCACAGTGTATAAG  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATTAAAGATCATCTGGGGGTTTTGAAAATGC-AAGCACAGTGTATAAG  949

seq1  CTAAGTATTATGAAGGGCAAAGATCTCTACTTGGCAAGGAAATGGGAAGA  1000
      |||||||||||||| ||||||||||||||||||   |||||||||| |||
seq2  CTAAGTATTATGAACGGCAAAGATCTCTACTTG--CAGGAAATGGG-AGA  996

seq1  GAGGGTACAGGAGACAGAACAAGAGTACACAGGGGAGCAGTTATTAGCCA  1050
      ||||||||||||||||||   |||||||||| ||||||||||||||||||
seq2  GAGGGTACAGGAGACAGA--CAGAGTACACA-GGGAGCAGTTATTAGCCA  1043

seq1  GTCTGGGGAGAACAATAGTGGGGGCTTGGGCATCTT-CAAACATCTGTGG  1099
      ||||||||||||| ||||| |||||||||||||||| ||||||||||| |
seq2  GTCTGGGGAGAAC-ATAGT-GGGGCTTGGGCATCTTCCAAACATCTGT-G  1090

seq1  TAATTTCCAGTCAT-CTCTGCTCCTCTAGTCATTG-AGAGGGAGGCTGAG  1147
      ||  ||| |||||| |||||||||||||||||||| ||||||| |||   
seq2  TA--TTCAAGTCATCCTCTGCTCCTCTAGTCATTGAAGAGGGAAGCT--T  1136

seq1  GAGAGGAAGCAGCCTGCTGTCT  1169
      |||| ||||||| |||||||||
seq2  GAGAAGAAGCAG-CTGCTGTCT  1157


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