BAC Information

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BAC

Clone NameB6Ng01-305G15
Chromosome9 (Build37)
Map Location 37,026,558 - 37,027,792
singlet/doubletsinglet
Overlap gene1810021J13Rik
Upstream geneLOC100042485, EG639025, LOC671003, EG434396, A630095E13Rik, Acrv1, Chek1, Stt3a, Ei24, LOC627681, Fez1, Pknox2, LOC100042545
Downstream geneSlc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305G15.bB6Ng01-305G15.g
ACCGA098711GA098712
length1,2311,215
definitionB6Ng01-305G15.b B6Ng01-305G15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcattgttaggaattgggagttaccaggaataaataggaatata
ccctgctggcacctatctgggaagcaaggctttgaggtggaagactttgt
gaaccttcagggactgtgcccccagggacaagccaacacaggcttgtcca
gttagaagtcagcacagttagaactagactgtccgcagtgcagtgcttct
gatttcaactcaggtctctttgctcccaggttctccatcgtctttgtctt
cctcggagctctgatcattactacagttctattgcttttccctcgagcca
gtgaattcccagccccagaaggagaaatgaaggtaaagctatttggtttc
attttgcccctaatctcagcccctccacccgaccctgggagcagttcaaa
caacaatagggctccaagggagctgccctgggaaagggtcttatgaatcc
cacctgcagggccacagggcagtgatttacctggtggtcatcatttgcca
ctctcatcaagttgaatgactgcggagagccactccttacttagagacag
gcagagagttaggaactaggaactggctggcttaggctgtaaatgtggta
ttccccattcctggttaatattggttcagagtctcagatcctgtcataat
gggagtgtgttctcagggtgctgagtgacatgattttccatcctgaagtt
gatttctcccactgtggtgtcaagagaatcatttccatcaagagcagtgg
gtaagaggagtcattccacggaaagcagaaggtgaagttacagatgtgtt
ctatgctaatgactgtcgtcttcattccttagaccacagctgccagcccc
tacttctggaaatagatttgtatcacctctgtcatcaccccatttctgca
gacctcacttggtctggttcattcctcacctggggctctggttccaccat
gtgtgactggtctcagacccaccggctcttgctaagggtactgacctgtc
tgccccattacatcttcttgtggcattctgggttccttccaataggctaa
ttttaattttaaaggagaagccatgcttaatagctagcaattcttaaaga
tttcctgtatttcttgaagacctgtgctatcaactttgttacatgttctc
aatgaaccgcccaagcaagtcctaagttaggtactgcctttgaaggttca
ggacctgccatatttcacagttcctggaaaa
gaattcttcatctgcttcagaactactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgctcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcatctagaatccgccctat
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacacta
gaaaaaattcaaggccaaacatattccactttacttctgatagactgtct
tgaatttccttagaaagttcaaggtcagacttacctcgtaaagctgtact
cactggtactctcgttccccagctgaaaagttctgaattcatacagttga
atccttcttaacagtctgctttacgggaacctttattaccgcgacccgca
gttctggttctggaatgagggatcttccttgcgccagtcccgagtttttt
ctcgtcccggaattcggcaccaattgttattagacgcgttctcacgaccg
gccaggaagaacaccacagaccagaatcttctgcggcaaagctttattgc
ttacatcttcaggagccagagtgcaggaagcaagagagcaagaagcaaga
gagcaagaagcaagagagagagaaaacgaaaccccgtccctcttaaggag
cattctctttcgcctcggtcgtgtcactccctgattggctgcagcccatc
ggccgagttgacgtcacggggaaggcagagcacaagtagtcataagatac
ccttggcacatgcgcagattattttgtttaccactttagaacacagctgt
tcagcgccatcttgtaacgggcgaatgtgggcgcggctccaacagctttg
atctggtattttctcactatgcctccctttctaccttctggaaattgcag
tgtatatctgtgtcattatatgttggaaattgtaatctgccttttcattt
gattttataagggggctaagttaagagaatttgcaatggattgtcgaaga
gattggactttgtacttttaaacacgtgtgtagccggtataagagacaca
tagagcagtctctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37026558_37027792
seq2: B6Ng01-305G15.b_43_1273

seq1  GAATTCTCATTGTTAGGAATTGGGAGTTACCAGGAATAAATAGGAATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTGTTAGGAATTGGGAGTTACCAGGAATAAATAGGAATATA  50

seq1  CCCTGCTGGCACCTATCTGGGAAGCAAGGCTTTGAGGTGGAAGACTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGGCACCTATCTGGGAAGCAAGGCTTTGAGGTGGAAGACTTTGT  100

seq1  GAACCTTCAGGGACTGTGCCCCCAGGGACAAGCCAACACAGGCTTGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTCAGGGACTGTGCCCCCAGGGACAAGCCAACACAGGCTTGTCCA  150

seq1  GTTAGAAGTCAGCACAGTTAGAACTAGACTGTCCGCAGTGCAGTGCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAGTCAGCACAGTTAGAACTAGACTGTCCGCAGTGCAGTGCTTCT  200

seq1  GATTTCAACTCAGGTCTCTTTGCTCCCAGGTTCTCCATCGTCTTTGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCAACTCAGGTCTCTTTGCTCCCAGGTTCTCCATCGTCTTTGTCTT  250

seq1  CCTCGGAGCTCTGATCATTACTACAGTTCTATTGCTTTTCCCTCGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGAGCTCTGATCATTACTACAGTTCTATTGCTTTTCCCTCGAGCCA  300

seq1  GTGAATTCCCAGCCCCAGAAGGAGAAATGAAGGTAAAGCTATTTGGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTCCCAGCCCCAGAAGGAGAAATGAAGGTAAAGCTATTTGGTTTC  350

seq1  ATTTTGCCCCTAATCTCAGCCCCTCCACCCGACCCTGGGAGCAGTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCCCTAATCTCAGCCCCTCCACCCGACCCTGGGAGCAGTTCAAA  400

seq1  CAACAATAGGGCTCCAAGGGAGCTGCCCTGGGAAAGGGTCTTATGAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATAGGGCTCCAAGGGAGCTGCCCTGGGAAAGGGTCTTATGAATCC  450

seq1  CACCTGCAGGGCCACAGGGCAGTGATTTACCTGGTGGTCATCATTTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCAGGGCCACAGGGCAGTGATTTACCTGGTGGTCATCATTTGCCA  500

seq1  CTCTCATCAAGTTGAATGACTGCGGAGAGCCACTCCTTACTTAGAGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATCAAGTTGAATGACTGCGGAGAGCCACTCCTTACTTAGAGACAG  550

seq1  GCAGAGAGTTAGGAACTAGGAACTGGCTGGCTTAGGCTGTAAATGTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAGTTAGGAACTAGGAACTGGCTGGCTTAGGCTGTAAATGTGGTA  600

seq1  TTCCCCATTCCTGGTTAATATTGGTTCAGAGTCTCAGATCCTGTCATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCATTCCTGGTTAATATTGGTTCAGAGTCTCAGATCCTGTCATAAT  650

seq1  GGGAGTGTGTTCTCAGGGTGCTGAGTGACATGATTTTCCATCCTGAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGTGTTCTCAGGGTGCTGAGTGACATGATTTTCCATCCTGAAGTT  700

seq1  GATTTCTCCCACTGTGGTGTCAAGAGAATCATTTCCATCAAGAGCAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCCCACTGTGGTGTCAAGAGAATCATTTCCATCAAGAGCAGTGG  750

seq1  GTAAGAGGAGTCATTCCACGGAAAGCAGAAGGTGAAGTTACAGATGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGAGTCATTCCACGGAAAGCAGAAGGTGAAGTTACAGATGTGTT  800

seq1  CTATGCTAATGACTGTCGTCTTCATTCCTTAGACCACAGCTGCCAGCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTAATGACTGTCGTCTTCATTCCTTAGACCACAGCTGCCAGCCCC  850

seq1  TACTTCTGGAAATAGATTTGTATCACCTCTGTCATCACCCCATTTCTGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTGGAAATAGATTTGTATCACCTCTGTCATCACCCCATTTCTGCA  900

seq1  GACCTCACTTGGTCTGGTTCATTCCTCACCTGGGGCTCTGGTTCCACCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCACTTGGTCTGGTTCATTCCTCACCTGGGGCTCTGGTTCCACCAT  950

seq1  GTGTGACTGGTCTCAGACCCACCGGCTCTTGCTAAGGGTACTGACCTGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACTGGTCTCAGACCCACCGGCTCTTGCTAAGGGTACTGACCTGTC  1000

seq1  TGCCCCATTACATCTTCTTGTGGCATTCT-GGTTCCTTCCAATA-GCT-A  1047
      ||||||||||||||||||||||||||||| |||||||||||||| ||| |
seq2  TGCCCCATTACATCTTCTTGTGGCATTCTGGGTTCCTTCCAATAGGCTAA  1050

seq1  TTTTAATTTTAAAGTAGAAGCCATGC-TAATAGCTAGC-ATTCTTAAAGG  1095
      |||||||||||||| ||||||||||| ||||||||||| |||||||||| 
seq2  TTTTAATTTTAAAGGAGAAGCCATGCTTAATAGCTAGCAATTCTTAAAGA  1100

seq1  ATTACTGTA-TTCT--GAGACCTGTGCTAAACAACTTGTTTACATTGTCT  1142
       || ||||| ||||   ||||||||||| | ||||||  ||||||  |||
seq2  TTTCCTGTATTTCTTGAAGACCTGTGCT-ATCAACTTTGTTACATGTTCT  1149

seq1  CAGTGAAACCGCAC-AGC-AGTCCTAAGTTAGGTACTGTCGTTTTCTGGG  1190
      || || |||||| | ||| ||||||||||||||||||| | ||      |
seq2  CAATG-AACCGCCCAAGCAAGTCCTAAGTTAGGTACTGCCTTT------G  1192

seq1  AAAGAGGTTCAGGTGACCTGGCCATA-TTCACACTGTCCTGGAAAA  1235
      |   ||||||||  ||||| |||||| |||||| | ||||||||||
seq2  A---AGGTTCAG--GACCT-GCCATATTTCACAGT-TCCTGGAAAA  1231