BAC Information

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BAC

Clone NameB6Ng01-309H05
Chromosome9 (Build37)
Map Location 93,972,943 - 93,974,021
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674371
Downstream geneLOC384967, EG384968, 1190002N15Rik, EG667601, Slc9a9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309H05.bB6Ng01-309H05.g
ACCGA101689GA101690
length1,065372
definitionB6Ng01-309H05.b B6Ng01-309H05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaaatggatctttttttgtgtttcacaagactctggatgcct
gttacacctgcccaagatcattgaactatatgttctctttgaggccaggc
attagaacagtgcccatttcacataggaagcagctcagacacagctgttg
aaacagttttccaaagccaatgaccccaggctttatgctgtctctaagaa
ttgttgaactatctgttggaagttgaaaaatgttggctttgatgatttca
actttttcctttctctgtaactaaatcagaattactttttgacactgaat
ggtgcaattttggggattagcatacagtcctggcatttaaactaattata
gcagaaaattggatagatagttgagtaaagcaaaaggaagacttgtttct
ttaacgttagtggtcagtgaatattaattattattatatagctatctttt
caaagttgaaacacttcctcttgggaaaagagggacactcctaaaactgg
gggaacaaaatcaaattataattctcagaaaagtgacaaattacttgagt
aacagggctcctgaatttgcctaagcagtaaacaactgatagaggaggag
gtggtcctattgatggagcagccagcatgttgggcagggagctacaggga
tgtcccttttgttgtcttgacccatgaagggcagaggggggcaagctttt
cagtaatatagcattctctgagtcacccatgctcatgtatgcaactacta
taaacttacttattcgccaaagccaactcggggaaaattggttctctact
ttgttgtcactttcttaactggagtgaatagatgtatgttcacatctctg
taggaaatgccttagaggagctactcatgaatctcctaaagcaataacct
gcataacagcaggtttctgaagtattaggaaggagcaaagaagtaaacag
ataaatttatggagaatcagaacttcactggagtgttacaaaggaatttg
gtaggattcactttgataaaatgctattaatgaagagaagaaagcaatgg
tgagatcacaggaaa

aactctctagtttgtgtactgggtcctctatggaagagttaggggagaga
ctgaaggagctgaaggggattgcaaccccataggaagaacaacaatataa
actaactggacaccccagagttcccagggactaaaccaccaaccaaagaa
tgcaaatggttccagatatatatgtagcagaagatgtccttttctgacat
caatgggaggagaggcccttggttctgtaaaagctcagtgccccagtgta
tggagactctagtacagtgagacaggagtgggtgggtggttggggagcac
actcatagtagtttaggagggggatggtatggtcatttgatatttgtaga
gacatgcaggtttacgtgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_93972943_93974021
seq2: B6Ng01-309H05.b_49_1113 (reverse)

seq1  TTTCCTGTGATCTTCAACCATTTGCTTTCTTTCTCTTCATTTAATTAGCA  50
      |||||||||||||   |||| |||||||| |||||||||||  | |||||
seq2  TTTCCTGTGATCT--CACCA-TTGCTTTC-TTCTCTTCATT--AATAGCA  44

seq1  TTTTTATCAAAGTGAATTCTTACCAATTTCCTTTTGTAACACCTCCCAGG  100
       ||||||||||||||| || |||||| |||| ||||||||| ||||   |
seq2  -TTTTATCAAAGTGAA-TCCTACCAAATTCC-TTTGTAACA-CTCC--AG  88

seq1  TGAAGTTCTGATTCTCCATAAATTTATCTGTTTTACTTCTTTGCTCCTTC  150
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGAAGTTCTGATTCTCCATAAATTTATCTG-TTTACTTCTTTGCTCCTTC  137

seq1  CTAATACTTCAGAAACCCTGCTGTTATGCAGGTTATTGCTTTAGGAGATT  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTAATACTTCAGAAA-CCTGCTGTTATGCAGGTTATTGCTTTAGGAGATT  186

seq1  CATGAGTAGCTCCTCTAAGGCATTTCCTACAGAGATGTGAACATACATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTAGCTCCTCTAAGGCATTTCCTACAGAGATGTGAACATACATCT  236

seq1  ATTCACTCCAGTTAAGAAAGTGACAACAAAGTAGAGAACCAATTTTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTCCAGTTAAGAAAGTGACAACAAAGTAGAGAACCAATTTTCCCC  286

seq1  GAGTTGGCTTTGGCGAATAAGTAAGTTTATAGTAGTTGCATACATGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGCTTTGGCGAATAAGTAAGTTTATAGTAGTTGCATACATGAGCA  336

seq1  TGGGTGACTCAGAGAATGCTATATTACTGAAAAGCTTGCCCCCCTCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGACTCAGAGAATGCTATATTACTGAAAAGCTTGCCCCCCTCTGCC  386

seq1  CTTCATGGGTCAAGACAACAAAAGGGACATCCCTGTAGCTCCCTGCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGGGTCAAGACAACAAAAGGGACATCCCTGTAGCTCCCTGCCCAA  436

seq1  CATGCTGGCTGCTCCATCAATAGGACCACCTCCTCCTCTATCAGTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGGCTGCTCCATCAATAGGACCACCTCCTCCTCTATCAGTTGTTT  486

seq1  ACTGCTTAGGCAAATTCAGGAGCCCTGTTACTCAAGTAATTTGTCACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTAGGCAAATTCAGGAGCCCTGTTACTCAAGTAATTTGTCACTTT  536

seq1  TCTGAGAATTATAATTTGATTTTGTTCCCCCAGTTTTAGGAGTGTCCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAATTATAATTTGATTTTGTTCCCCCAGTTTTAGGAGTGTCCCTC  586

seq1  TTTTCCCAAGAGGAAGTGTTTCAACTTTGAAAAGATAGCTATATAATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCAAGAGGAAGTGTTTCAACTTTGAAAAGATAGCTATATAATAAT  636

seq1  AATTAATATTCACTGACCACTAACGTTAAAGAAACAAGTCTTCCTTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATATTCACTGACCACTAACGTTAAAGAAACAAGTCTTCCTTTTGC  686

seq1  TTTACTCAACTATCTATCCAATTTTCTGCTATAATTAGTTTAAATGCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCAACTATCTATCCAATTTTCTGCTATAATTAGTTTAAATGCCAG  736

seq1  GACTGTATGCTAATCCCCAAAATTGCACCATTCAGTGTCAAAAAGTAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATGCTAATCCCCAAAATTGCACCATTCAGTGTCAAAAAGTAATT  786

seq1  CTGATTTAGTTACAGAGAAAGGAAAAAGTTGAAATCATCAAAGCCAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAGTTACAGAGAAAGGAAAAAGTTGAAATCATCAAAGCCAACAT  836

seq1  TTTTCAACTTCCAACAGATAGTTCAACAATTCTTAGAGACAGCATAAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTTCCAACAGATAGTTCAACAATTCTTAGAGACAGCATAAAGC  886

seq1  CTGGGGTCATTGGCTTTGGAAAACTGTTTCAACAGCTGTGTCTGAGCTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTCATTGGCTTTGGAAAACTGTTTCAACAGCTGTGTCTGAGCTGC  936

seq1  TTCCTATGTGAAATGGGCACTGTTCTAATGCCTGGCCTCAAAGAGAACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGTGAAATGGGCACTGTTCTAATGCCTGGCCTCAAAGAGAACAT  986

seq1  ATAGTTCAATGATCTTGGGCAGGTGTAACAGGCATCCAGAGTCTTGTGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCAATGATCTTGGGCAGGTGTAACAGGCATCCAGAGTCTTGTGAA  1036

seq1  ACACAAAAAAAGATCCATTTGTGGAATTC  1079
      |||||||||||||||||||||||||||||
seq2  ACACAAAAAAAGATCCATTTGTGGAATTC  1065


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