MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-309M14
Chromosome	9 (Build37)
Map Location	52,007,903 - 52,177,770
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Pou2af1, Gm684, 1810046K07Rik, LOC100042854, LOC640374, LOC668070, Arhgap20, LOC629554, LOC100043409, Fdx1, EG629557, Rdx, 9830163H01Rik, Zc3h12c
Downstream gene	LOC100042876, AI593442, Gm1715, Ddx10, Exph5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pou2af1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18985 MGI:105086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm684 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270157 MGI:2685530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	1810046K07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69809 MGI:1917059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 2 Proteins

name	LOC100042854 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC640374 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 933 ESTs, 23 Proteins

name	LOC668070 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 811 ESTs, 5 Proteins pseudo : _no_value

name	Arhgap20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244867 MGI:2445175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629554 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043409 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Fdx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14148 MGI:103224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629557 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629557 MGI:3646966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 90 ESTs, 25 Proteins

name	Rdx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19684 MGI:97887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9830163H01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414109 MGI:3041213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zc3h12c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244871 MGI:3026959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins

name	LOC100042876 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	AI593442 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330941 MGI:2143099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gm1715 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382139 MGI:2686561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ddx10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77591 MGI:1924841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 145 ESTs, 7 Proteins

name	Exph5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320051 MGI:2443248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pou2af1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130242 GeneID:18985 MGI:105086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 2, associating factor 1 transcript_id : NM_011136.2

name	Gm684 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386104 GeneID:270157 MGI:2685530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : gene model 684, (NCBI) transcript_id : XM_196479.4

name	1810046K07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259962 GeneID:69809 MGI:1917059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 2 Proteins product : RIKEN cDNA 1810046K07 gene, transcript variant 1 transcript_id : XM_134800.6

name	LOC640374 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259963 GeneID:640374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 mRNAs, 933 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) transcript_id : XM_001480150.1

name	Arhgap20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47575839 GeneID:244867 MGI:2445175
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 20 transcript_id : NM_175535.3

name	LOC100043409 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259966 GeneID:100043409
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043409 transcript_id : XM_001480159.1

name	Fdx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679764 GeneID:14148 MGI:103224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ferredoxin 1 transcript_id : NM_007996.1

name	EG629557 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386106 GeneID:629557 MGI:3646966
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 90 ESTs, 25 Proteins product : predicted gene, EG629557 transcript_id : XM_894456.2

name	Rdx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353663 GeneID:19684 MGI:97887
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : radixin transcript_id : NM_009041.2

name	9830163H01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47894414 GeneID:414109 MGI:3041213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9830163H01 gene transcript_id : NM_001001500.1

name	Zc3h12c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386107 GeneID:244871 MGI:3026959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 24 ESTs, 11 Proteins product : zinc finger CCCH type containing 12C transcript_id : XM_146893.6

name	LOC100042876 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259932 GeneID:100042876
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Btf3 protein transcript_id : XM_001478980.1

name	AI593442 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342698 GeneID:330941 MGI:2143099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI593442 transcript_id : NM_177907.2

name	AI593442 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381639 GeneID:330941 MGI:2143099
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI593442 transcript_id : NM_178906.3

name	Gm1715 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259934 GeneID:382139 MGI:2686561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : gene model 1715, (NCBI) transcript_id : XM_001478987.1

name	Ddx10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386109 GeneID:77591 MGI:1924841
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 145 ESTs, 7 Proteins product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 transcript_id : XM_284494.5

name	Exph5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341147 GeneID:320051 MGI:2443248
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exophilin 5 transcript_id : NM_176846.2

name	Pou2af1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755128 CCDS:CCDS23176.1 GeneID:18985 MGI:105086
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : POU domain, class 2, associating factor 1 protein_id : NP_035266.1

name	Gm684 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38090334 GeneID:270157 MGI:2685530
definition	codon_start : 1 product : similar to LOC120376 protein protein_id : XP_196479.2

name	1810046K07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20888581 GeneID:69809 MGI:1917059
definition	codon_start : 1 product : hypothetical protein LOC69809 isoform 1 protein_id : XP_134800.1

name	LOC640374 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259964 GeneID:640374
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_001480200.1

name	Arhgap20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47575840 CCDS:CCDS23177.1 GeneID:244867 MGI:2445175
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 20 protein_id : NP_780744.2

name	LOC100043409 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259967 GeneID:100043409
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480209.1

name	Fdx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679765 CCDS:CCDS23178.1 GeneID:14148 MGI:103224
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : adrenodoxin product : ferredoxin 1 protein_id : NP_032022.1

name	EG629557 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930042 GeneID:629557 MGI:3646966
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_899549.1

name	Rdx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677699 GeneID:19684 MGI:97887
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005902 - microvillus [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0045176 - apical protein localization [Evidence IMP]; GO:0051016 - barbed-end actin filament capping [Evidence IEA]; GO:0030033 - microvillus biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation product : radixin protein_id : NP_033067.1

name	9830163H01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47894415 GeneID:414109 MGI:3041213
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC414109 protein_id : NP_001001500.1

name	Zc3h12c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386108 GeneID:244871 MGI:3026959
definition	codon_start : 1 product : similar to hCG39183 protein_id : XP_146893.6

name	LOC100042876 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259933 GeneID:100042876
definition	codon_start : 1 product : similar to Btf3 protein protein_id : XP_001479030.1

name	AI593442 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244544 GeneID:330941 MGI:2143099
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC330941 isoform 1 protein_id : NP_808575.1

name	AI593442 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725766 GeneID:330941 MGI:2143099
definition	codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC330941 isoform 2 protein_id : NP_849237.1

name	Gm1715 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259935 GeneID:382139 MGI:2686561
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479037.1

name	Ddx10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930055 GeneID:77591 MGI:1924841
definition	codon_start : 1 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 protein_id : XP_284494.3

name	Exph5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28849901 CCDS:CCDS23181.1 GeneID:320051 MGI:2443248
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : synaptotagmin-like homologue lacking C2 domains b protein_id : NP_789816.1

name	LOC100042854 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042854
definition	number : 2 pseudo : _no_value

name	LOC100042854 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042854
definition	number : 1 pseudo : _no_value

name	LOC668070 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259965 GeneID:668070
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 811 ESTs, 5 Proteins product : similar to ribosomal protein L9 pseudo : _no_value transcript_id : XR_034563.1

name	LOC629554 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259931 GeneID:629554
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC629554 transcript_id : XR_035395.1

clone name	MSMg01-122L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495F07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-155M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-125N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507M16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-083N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436O07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-309M14.b	B6Ng01-309M14.g
ACC	GA101940	GA101941
length	1,178	1,097
definition	B6Ng01-309M14.b	B6Ng01-309M14.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(52,007,903 - 52,009,094)	(52,176,658 - 52,177,770)
sequence	gaattctgtggatgggccaccgtattcagccatctcccccattagtggct ttctatgttgttttcagttctcggatcttacacgtgccctgacgtcgtgg cacgcaccctcatcaggttggctcctggaagtgagatgaagcaccgacga gtttgttggtcataaaagcttgtaacatctataatttccatatatttcag taatttttctttatccctcatcaaatgcaagtgctataatcttctcaggc ttttcggttgacaaaatgattatcatgattattcttactttacagttacc caccttggagtgaatttaaaccttttttgcatggttgttgaccatttata tttgcctttatctacccacatgttttcattagttttaacattttatattt tcccttttcctgctcatctgaaaatgattttgtaaatcaaactggtcttt tttcatgttatttaaaatatgaattccaagaatagtagtaaaaaggaagg ggaagctaccagtagaaaattataaaagaaataaaactcatattaggcac atttcagagtcttctgttcagcaatgtttggtgacacttactgatgagat ctgagattattttcatttaggtgaagatagctttctgtagagcagcagcc atgccagatggaaatgatcccgttggcccaacctgttaaaggaaatgctt tggcaagagaactgctcatcttgacagtaatttccagagatgaatatcat agttactagagataagacacgtgagctctcagcaggcatcgtagcaggag aataatcattaagcatatcgtgttcatctcactaaagagtagcatcagta tacacaagcaagttgttacttcatgagcttgggagttgagtgacagccca tctaacgaggcctttaaactaggcaggctaactttttctttatcattaat aggcttcagttactggcaatgaggtcattaaaaattagtatatgtagtgg gagtaacatctgaagcacactaagagatgtgtttgttagatgctattctg atgcaatatctaggaaatcctgctgttgatgatcatgatcttatcagcgt ctatcaatctctgtctattataatctacgtactaactactatgtagtacc ctctcaatctgtgtatcttcaatttgtg	gaattcaataaatgtggtaggttggcacaagggcctgtggaacacacaag gtcacactgtacattaaaaggagactcaactactttaatagatcatattt ttaaggtgtgctattcatagcttccttatacagaagtttaaaaatatttg tgttggctttggatcttaaacttgactgtaaactggcattcttgaactta ggaaatagatttataagtcggctttagatcaactctaaaatatcgaccca ttaacaggagtctgtgttgtttgtttgtttgtttgtttttgctttgtttg cttgcttgcttgttgagtattacatgtgccctcagtttgaggtattactg ttttgcatctgacgaatctgtttacctccttcctgtgtgcacattctggg cgtttgttctgctctgactcaacaagctcctcaggacagaataaaattct tgcagcatcagctgtcccttctcataatgccaagacaaagcttgcgttct caaagtgtctgggctaattcctcagtctagagaatgacagacccgattga attagctgtggttctttcatcactaattagatggcaaagcagactctcgc ctcgggctctcaggcgtggacgctgctcccctaattagtctaacggaggg agtgaagccctggcaggagatgtccttgtgtgatcttggacagtgagctt ctctccagggtagcaaggtgggctgaggatgtggctcagtggttagagtg ctggcctgggattctgtgtgagaccaggtccaatctcctgcacagcataa acaggcttggtggcacatgcacatagtctcagcactaagaggtgaagcca gcagaagcagaagtgcaaggccattctcatgtacatactgagtctaaact catcagcctcggtgacacgagatcctaagcattaagccatttaggaaata aaacaaattggtctgcctaggaaacactcgtcaataaaaattactgctag catctacaagccctgggtcaatgcccagcacttattttacaaactgggag cataagacacgtaatttttaatcaatttatatccctagtgtacaaca
quality values	Open. Hide. 58 36 27 32 58 58 23 25 62 62 62 20 23 62 62 54 62 47 46 47 62 49 47 62 62 62 47 39 62 35 32 19 27 32 28 32 32 45 51 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 59 59 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 52 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 54 58 58 58 54 54 52 58 50 58 58 58 58 58 58 58 53 51 54 41 52 54 58 51 51 58 58 58 58 58 58 51 58 42 49 46 54 58 58 58 51 58 58 44 50 58 58 41 41 51 51 58 58 58 40 46 36 58 51 47 58 58 58 47 52 51 58 51 51 49 58 50 54 58 58 39 51 46 54 51 50 58 43 44 50 58 58 52 51 36 58 52 51 52 49 58 53 52 54 47 40 58 58 42 41 33 42 46 30 58 49 47 58 49 50 51 49 36 50 58 58 51 53 53 47 50 39 33 42 26 38 46 51 51 54 49 41 39 54 49 44 47 47 54 34 49 49 41 54 54 37 41 50 38 35 54 53 54 32 51 35 37 45 53 37 42 47 32 45 45 53 53 51 42 52 37 35 40 45 41 53 54 49 39 45 37 53 54 19 28 33 45 41 34 53 37 37 40 37 42 52 33 32 34 25 34 32 52 30 46 41 31 28 32 51 30 33 16 31 40 32 36 37 32 28 32 53 32 45 32 32 24 34 32 29 52 30 24 32 36 35 32 45 24 42 29 9 36 38 33 51 26 29 32 31 32 33 29 31 33 30 33 29 31 29 30 31 31 43 35 31 46 28 34 31 28 42 31 45 31 31 31 37 31 47 28 31 42 31 33 31 25 42 26 31 31 6 7 11 31 30 25 31 24 31 26 31 25 33 25 32 26 36 37 42 28 31 25 30 31 26 31 23 32 31 36 16 27 31 31 29 46 32 27 19 42 31 26 39 24 34 31 31 23 31 34 31 33 27 31 30 26 36 22 25 21 20 31 30 22 17 11 22 43 22 26 41 24 17 27 10 13 13 20 27 21 27 31 37 33 32 20 31 47 48 47 21 38 28 48 26 18 20 30 20 30 14 37 17 18 21 8 34 17 34 33 32 18 13 22 25 14 32 21 22 25 11 15 15 22 32 24 16 19 27 34 24 26 30 22 48 43 47 30 9 24 21 13 25 15 11 9 9 30 11 17 8 7 6 40 10 25 14 28 24 8 15 16 27 12 25 6 11 20 13 13 6 9 7 16 6 10 15 5 16 6 16 11 27 11 16 12 40 21 11 5 15 9 10 9 15 25 20 16 7 8 5 6 13 13 11 13 9 8 22 11 16 7 13 5 12 4 4 5 3 13 17 7 12 19 10 16 7 6 3 3 6 17 8 4 15 18 20 20 16 16 9 15 3 5 4 7 13 21 20 10 4 4 4 4 11 6 7 6 7 5 7 7 9 8 5 1 3 3 17 4 17 11 13 7 3 4 3 5 23 5 12 5 2 3 8 24 6 7 6 27 6 13 4 3 7 4 11 5 7 6 4 6 11 15 7 5 7 7 9 4 5 4 8 4 3 1 3 3 2 1 5 11 7 8 4 2 3 4 4 5 4 13	Open. Hide. 56 38 56 47 62 47 44 62 62 24 18 18 21 21 22 24 19 18 18 56 43 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 56 51 43 31 31 33 28 35 43 62 62 54 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 45 46 58 54 49 54 58 58 58 52 58 58 58 58 54 54 58 58 58 58 54 47 58 58 58 58 58 58 58 58 58 58 54 54 58 54 58 54 58 54 58 58 58 58 54 58 58 58 58 54 58 42 58 49 39 58 58 52 58 54 58 40 58 58 51 51 39 58 58 58 58 51 58 45 46 58 58 58 51 58 42 41 58 54 58 58 49 58 46 52 53 52 58 46 49 58 54 58 53 52 51 41 58 58 42 48 58 58 32 58 51 50 58 33 58 53 58 53 49 49 58 51 52 41 58 58 50 58 53 54 52 50 19 58 51 58 50 54 54 43 32 52 58 52 51 51 49 50 44 39 58 32 39 53 42 53 50 50 50 53 50 52 53 41 49 58 54 24 58 58 44 35 53 53 54 54 32 39 34 50 50 38 44 49 40 40 54 44 27 39 32 53 39 42 41 42 52 51 52 52 52 51 39 35 39 54 44 46 42 37 32 40 41 37 51 53 32 39 40 46 42 41 53 53 38 51 33 29 54 54 33 45 26 52 31 32 41 54 30 34 54 42 31 47 37 51 17 39 31 22 53 36 28 38 31 45 35 31 18 32 47 34 40 40 52 33 37 23 32 33 31 43 35 47 27 32 32 32 40 28 20 24 34 31 31 42 31 45 45 31 46 23 36 21 31 31 9 10 16 28 43 27 33 31 31 31 35 37 31 37 25 24 30 31 25 31 35 31 30 42 26 25 12 17 19 25 30 26 36 48 34 36 36 26 17 25 26 31 28 31 31 31 26 31 31 26 25 31 31 32 35 24 31 32 31 31 31 41 24 44 25 24 20 37 30 33 23 24 39 32 32 31 31 14 32 28 15 30 23 29 35 33 20 30 31 28 19 32 17 17 20 30 31 27 25 31 34 32 21 26 32 25 26 31 27 32 20 26 25 27 31 18 30 32 32 26 47 24 29 31 32 30 31 31 31 28 27 20 35 28 6 24 8 22 19 12 16 20 6 30 24 32 18 21 22 32 14 27 19 11 25 6 13 17 18 13 18 19 27 30 48 30 4 5 4 25 48 17 12 19 43 39 18 19 10 33 30 9 18 9 21 17 28 28 26 11 15 24 19 15 7 27 47 27 10 16 11 28 11 23 4 11 24 10 12 13 16 21 23 23 13 20 19 22 25 16 22 5 19 12 28 24 20 11 13 20 20 15 20 6 7 30 15 10 14 13 15 3 3 9 10 16 14 10 28 13 12 10 6 5 11 5 6 21 6 30 17 22 13 15 7 25 11 16 13 22 28 12 11 5 21 16 13 21 13 9 14 11 4 3 1 3 4 3 4 4 4 5 5 1 1 3 2 5 4 11 26 4 2 1 4 2 5 13 14 13 18 7 7 14 4 12 4 4 10 14 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_52007903_52009094
seq2: B6Ng01-309M14.b_50_1227

seq1  GAATTCTGTGGATGGGCCACCGTATTCAGCCATCTCCCCCATTAGTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGATGGGCCACCGTATTCAGCCATCTCCCCCATTAGTGGCT  50

seq1  TTCTATGTTGTTTTCAGTTCTCGGATCTTACACGTGCCCTGACGTCGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTGTTTTCAGTTCTCGGATCTTACACGTGCCCTGACGTCGTGG  100

seq1  CACGCACCCTCATCAGGTTGGCTCCTGGAAGTGAGATGAAGCACCGACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCACCCTCATCAGGTTGGCTCCTGGAAGTGAGATGAAGCACCGACGA  150

seq1  GTTTGTTGGTCATAAAAGCTTGTAACATCTATAATTTCCATATATTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGGTCATAAAAGCTTGTAACATCTATAATTTCCATATATTTCAG  200

seq1  TAATTTTTCTTTATCCCTCATCAAATGCAAGTGCTATAATCTTCTCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTCTTTATCCCTCATCAAATGCAAGTGCTATAATCTTCTCAGGC  250

seq1  TTTTCGGTTGACAAAATGATTATCATGATTATTCTTACTTTACAGTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCGGTTGACAAAATGATTATCATGATTATTCTTACTTTACAGTTACC  300

seq1  CACCTTGGAGTGAATTTAAACCTTTTTTGCATGGTTGTTGACCATTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGGAGTGAATTTAAACCTTTTTTGCATGGTTGTTGACCATTTATA  350

seq1  TTTGCCTTTATCTACCCACATGTTTTCATTAGTTTTAACATTTTATATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTTATCTACCCACATGTTTTCATTAGTTTTAACATTTTATATTT  400

seq1  TCCCTTTTCCTGCTCATCTGAAAATGATTTTGTAAATCAAACTGGTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTTCCTGCTCATCTGAAAATGATTTTGTAAATCAAACTGGTCTTT  450

seq1  TTTCATGTTATTTAAAATATGAATTCCAAGAATAGTAGTAAAAAGGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTTATTTAAAATATGAATTCCAAGAATAGTAGTAAAAAGGAAGG  500

seq1  GGAAGCTACCAGTAGAAAATTATAAAAGAAATAAAACTCATATTAGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTACCAGTAGAAAATTATAAAAGAAATAAAACTCATATTAGGCAC  550

seq1  ATTTCAGAGTCTTCTGTTCAGCAATGTTTGGTGACACTTACTGATGAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAGTCTTCTGTTCAGCAATGTTTGGTGACACTTACTGATGAGAT  600

seq1  CTGAGATTATTTTCATTTAGGTGAAGATAGCTTTCTGTAGAGCAGCAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTATTTTCATTTAGGTGAAGATAGCTTTCTGTAGAGCAGCAGCC  650

seq1  ATGCCAGATGGAAATGATCCCGTTGGCCCAACCTGTTAAAGGAAATGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGATGGAAATGATCCCGTTGGCCCAACCTGTTAAAGGAAATGCTT  700

seq1  TGGCAAGAGAACTGCTCATCTTGACAGTAATTTCCAGAGATGAATATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGAGAACTGCTCATCTTGACAGTAATTTCCAGAGATGAATATCAT  750

seq1  AGTTACTAGAGATAAGACACGTGAGCTCTCAGCAGGCATCGTAGCAGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTAGAGATAAGACACGTGAGCTCTCAGCAGGCATCGTAGCAGGAG  800

seq1  AATAATCATTAAGCATATCGTGTTCATCTCACTAAAGAGTAGCATCAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATAATCATTAAGCATATCGTGTTCATCTCACTAAAGAGTAGCATCA-GT  849

seq1  ATACACAAGCAAGTTGTTACTTCATGAGCTTGGGAGTTGAGTGACAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAGCAAGTTGTTACTTCATGAGCTTGGGAGTTGAGTGACAGCCC  899

seq1  ATCTAACGAGGCCTTTAAACTAGGCAGGCTAACTTTTTCTTTATCATTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACGAGGCCTTTAAACTAGGCAGGCTAACTTTTTCTTTATCATTAA  949

seq1  TAGGCTTCAGTTACTGGCAATGAGGTCATTAAAAATTAGTATATGTAAGT  1000
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  TAGGCTTCAGTTACTGGCAATGAGGTCATTAAAAATTAGTATATGTAGTG  999

seq1  GGAGTAACATCTTGAAGCACACCTAAAGAGAATGTGTTTGTTAGATGCTA  1050
      ||||||||||| ||||||||||   ||||| |||||||||||||||||||
seq2  GGAGTAACATC-TGAAGCACAC--TAAGAG-ATGTGTTTGTTAGATGCTA  1045

seq1  -TCTGATTGCAAATATTCTAGGGGAAATCCCTGCTTGGTGGAATGATCAT  1099
       ||||| ||| |||| ||||  |||||| ||||||  || | ||||||||
seq2  TTCTGA-TGC-AATA-TCTA--GGAAAT-CCTGCT--GTTG-ATGATCAT  1086

seq1  GAATCTATCAGCGTCTATCTATCTTCCTGTCTATTTATATATCTACCTAC  1149
      ||   |||||||||||||| ||||  ||||||| ||||| |||||| || 
seq2  GATCTTATCAGCGTCTATCAATCT--CTGTCTA-TTATA-ATCTACGTA-  1131

seq1  CTACCTAACTATGTAGTA-CCTCTC-ATCTGTGTA--TTC-ATTTGTG  1192
      ||| || ||||||||||| |||||| |||||||||  ||| |||||||
seq2  CTAACT-ACTATGTAGTACCCTCTCAATCTGTGTATCTTCAATTTGTG  1178

seq1: chr9_52176658_52177770
seq2: B6Ng01-309M14.g_71_1167 (reverse)

seq1  TGTTGTTACACTAGGGATATAAATGAAATAAAAAAAAATAAGGTGGTCTT  50
      ||||| ||||||||||||||||||    | |  |||||| | || |||||
seq2  TGTTG-TACACTAGGGATATAAAT----TGATTAAAAATTACGT-GTCTT  44

seq1  ATGCTCCCAGTTTGTAAAATAAGGTGCTGGGCATTGAACCCAGGGCTTTG  100
      |||||||||||||||||||||| ||||||||||||| ||||||||| |||
seq2  ATGCTCCCAGTTTGTAAAATAA-GTGCTGGGCATTG-ACCCAGGGC-TTG  91

seq1  TAGATGCTAGGCAGTAATTTTTATTGACCGAGTTGTTTTCCTAGGCAGAC  150
      ||||||||| ||||||||||||||||| |||||   ||||||||||||||
seq2  TAGATGCTA-GCAGTAATTTTTATTGA-CGAGT--GTTTCCTAGGCAGAC  137

seq1  CAATTTGTTTTATTTCCCTAAATGGCTTAATTGCTTAGGATCTCGTGTCA  200
      ||||||||||||||| |||||||||||||| |||||||||||||||||||
seq2  CAATTTGTTTTATTT-CCTAAATGGCTTAA-TGCTTAGGATCTCGTGTCA  185

seq1  CCGAGGCTGATGAGTTTAGACTCAGTATGTACATGAGAATGGCCTTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGCTGATGAGTTTAGACTCAGTATGTACATGAGAATGGCCTTGCAC  235

seq1  TTCTGCTTCTGCTGGCTTCACCTCTTAGTGCTGAGACTATGTGCATGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTCTGCTGGCTTCACCTCTTAGTGCTGAGACTATGTGCATGTGC  285

seq1  CACCAAGCCTGTTTATGCTGTGCAGGAGATTGGACCCTGGTCTCACACAG  350
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CACCAAGCCTGTTTATGCTGTGCAGGAGATTGGA-CCTGGTCTCACACAG  334

seq1  AATCCCAGGCCAGCACTCTAACCACTGAGCCACATCCTCAGCCCACCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGGCCAGCACTCTAACCACTGAGCCACATCCTCAGCCCACCTTG  384

seq1  CTACCCTGGAGAGAAGCTCACTGTCCAAGATCACACAAGGACATCTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTGGAGAGAAGCTCACTGTCCAAGATCACACAAGGACATCTCCTG  434

seq1  CCAGGGCTTCACTCCCTCCGTTAGACTAATTAGGGGAGCAGCGTCCACGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCTTCACTCCCTCCGTTAGACTAATTAGGGGAGCAGCGTCCACGC  484

seq1  CTGAGAGCCCGAGGCGAGAGTCTGCTTTGCCATCTAATTAGTGATGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGCCCGAGGCGAGAGTCTGCTTTGCCATCTAATTAGTGATGAAAG  534

seq1  AACCACAGCTAATTCAATCGGGTCTGTCATTCTCTAGACTGAGGAATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAGCTAATTCAATCGGGTCTGTCATTCTCTAGACTGAGGAATTAG  584

seq1  CCCAGACACTTTGAGAACGCAAGCTTTGTCTTGGCATTATGAGAAGGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACACTTTGAGAACGCAAGCTTTGTCTTGGCATTATGAGAAGGGAC  634

seq1  AGCTGATGCTGCAAGAATTTTATTCTGTCCTGAGGAGCTTGTTGAGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATGCTGCAAGAATTTTATTCTGTCCTGAGGAGCTTGTTGAGTCAG  684

seq1  AGCAGAACAAACGCCCAGAATGTGCACACAGGAAGGAGGTAAACAGATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACAAACGCCCAGAATGTGCACACAGGAAGGAGGTAAACAGATTC  734

seq1  GTCAGATGCAAAACAGTAATACCTCAAACTGAGGGCACATGTAATACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGCAAAACAGTAATACCTCAAACTGAGGGCACATGTAATACTCA  784

seq1  ACAAGCAAGCAAGCAAACAAAGCAAAAACAAACAAACAAACAAACAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAAGCAAGCAAACAAAGCAAAAACAAACAAACAAACAAACAACAC  834

seq1  AGACTCCTGTTAATGGGTCGATATTTTAGAGTTGATCTAAAGCCGACTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCTGTTAATGGGTCGATATTTTAGAGTTGATCTAAAGCCGACTTA  884

seq1  TAAATCTATTTCCTAAGTTCAAGAATGCCAGTTTACAGTCAAGTTTAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTATTTCCTAAGTTCAAGAATGCCAGTTTACAGTCAAGTTTAAGA  934

seq1  TCCAAAGCCAACACAAATATTTTTAAACTTCTGTATAAGGAAGCTATGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGCCAACACAAATATTTTTAAACTTCTGTATAAGGAAGCTATGAA  984

seq1  TAGCACACCTTAAAAATATGATCTATTAAAGTAGTTGAGTCTCCTTTTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACACCTTAAAAATATGATCTATTAAAGTAGTTGAGTCTCCTTTTAA  1034

seq1  TGTACAGTGTGACCTTGTGTGTTCCACAGGCCCTTGTGCCAACCTACCAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTGTGACCTTGTGTGTTCCACAGGCCCTTGTGCCAACCTACCAC  1084

seq1  ATTTATTGAATTC  1113
      |||||||||||||
seq2  ATTTATTGAATTC  1097

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Alignment Information