BAC Information

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BAC

Clone NameB6Ng01-312F07
Chromosome9 (Build37)
Map Location 102,201,167 - 102,202,244
singlet/doubletsinglet
Overlap geneEphb1
Upstream geneEG382099, 9630041A04Rik
Downstream geneKy, LOC664843, Cep63, Anapc13, Amotl2, EG434510, Ryk, Slco2a1, Rab6b, Srprb, Trf, 1300017J02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312F07.bB6Ng01-312F07.g
ACCGA103826GA103827
length1,0781,220
definitionB6Ng01-312F07.b B6Ng01-312F07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagccttaatggtgcggctggcaggctcctcgggacagaaggc
aaggtctccaggctccgagggaagatgctatttatgtcattctatgacca
gccatggcaggctccaacagaaggctcagcgaggctcagccagagcctgg
ggagagcgggctctatgaagcaggattagagggcagacctcccaggcagc
ccaagtccagagtcactgggctcgtatcagggtccagatgtgctatcgtt
ttgaccggactagaaaaatgccaaggtgaggtccctgaagccatctaatt
agcaccaccccgaagaagctgtgttaggaaagaactcttccctgctggtt
agtgactaccacatatggagacctaacaggaagcaatcagagaagacgct
gtgccacatgaccccaggtcaaagtctaaggcactgagcttctagtgcct
gccaactgttgttgagaaaaggggcaatgaggaatgggaaagaaggccag
ggtttctcaaccttctccaaggtggtaggacaagcagaaggccttccaca
ccagagaatacctctcattaaaccctcttgcccttcatgctcacatccgt
caccctgtgggaaaggacaccattgtctgagcagaactctcctaaccggc
agtgggacagaagcaactggagtcccaccataggggctcccgctacccga
gggaaaggggcttccaggaagactctgacaaagcaatccaacgcttgaga
accaactgcttgactgtcctggctgttagcatctgccccactgactcagt
cccactctgtggtcaccgcctcccctggatatgcctcagtttcctctgaa
gcaagtgagtagatcagagtatttctctggggctcctgtctcctgccaga
gcagacaggctctcccgtgcctcttcctggaagtggcttttgggttcctg
ctacatctgctccaggctctttcatctacttgagaccttgctgtgggctg
ctgatagaaacagattttaatcatcctttgccatgtcgagtgctaaacac
acatcacctcccgtgacctaacagcatc
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tctggttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttgtatctacg
ggctttagatgtgttgacaagctgcgagtatgtgctgtcctcccgtttcc
tcttgcacgccactcagcgctatgagtttgcctctacacaatgctatcaa
tgcagtcccactaagtggggtacgatgatgacttcaatttcaataacgct
gtctaaaagttctttgactaactacttcaattgcattcgctttgacttag
agtatcactggcaaggagcgtgatgatacacgacttccacaggtgcaact
gctggcttccaatcactgataggtcgcttgatggacagatcagaatcctc
tatcgtcgcaccgcctgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_102201167_102202244
seq2: B6Ng01-312F07.b_47_1124

seq1  GAATTCTAAGCCTTAATGGTGCGGCTGGCAGGCTCCTCGGGACAGAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCCTTAATGGTGCGGCTGGCAGGCTCCTCGGGACAGAAGGC  50

seq1  AAGGTCTCCAGGCTCCGAGGGAAGATGCTATTTATGTCATTCTATGACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCCAGGCTCCGAGGGAAGATGCTATTTATGTCATTCTATGACCA  100

seq1  GCCATGGCAGGCTCCAACAGAAGGCTCAGCGAGGCTCAGCCAGAGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGCAGGCTCCAACAGAAGGCTCAGCGAGGCTCAGCCAGAGCCTGG  150

seq1  GGAGAGCGGGCTCTATGAAGCAGGATTAGAGGGCAGACCTCCCAGGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCGGGCTCTATGAAGCAGGATTAGAGGGCAGACCTCCCAGGCAGC  200

seq1  CCAAGTCCAGAGTCACTGGGCTCGTATCAGGGTCCAGATGTGCTATCGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCCAGAGTCACTGGGCTCGTATCAGGGTCCAGATGTGCTATCGTT  250

seq1  TTGACCGGACTAGAAAAATGCCAAGGTGAGGTCCCTGAAGCCATCTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCGGACTAGAAAAATGCCAAGGTGAGGTCCCTGAAGCCATCTAATT  300

seq1  AGCACCACCCCGAAGAAGCTGTGTTAGGAAAGAACTCTTCCCTGCTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCACCCCGAAGAAGCTGTGTTAGGAAAGAACTCTTCCCTGCTGGTT  350

seq1  AGTGACTACCACATATGGAGACCTAACAGGAAGCAATCAGAGAAGACGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTACCACATATGGAGACCTAACAGGAAGCAATCAGAGAAGACGCT  400

seq1  GTGCCACATGACCCCAGGTCAAAGTCTAAGGCACTGAGCTTCTAGTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACATGACCCCAGGTCAAAGTCTAAGGCACTGAGCTTCTAGTGCCT  450

seq1  GCCAACTGTTGTTGAGAAAAGGGGCAATGAGGAATGGGAAAGAAGGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTGTTGTTGAGAAAAGGGGCAATGAGGAATGGGAAAGAAGGCCAG  500

seq1  GGTTTCTCAACCTTCTCCAAGGTGGTAGGACAAGCAGAAGGCCTTCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCAACCTTCTCCAAGGTGGTAGGACAAGCAGAAGGCCTTCCACA  550

seq1  CCAGAGAATACCTCTCATTAAACCCTCTTGCCCTTCATGCTCACATCCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAATACCTCTCATTAAACCCTCTTGCCCTTCATGCTCACATCCGT  600

seq1  CACCCTGTGGGAAAGGACACCATTGTCTGAGCAGAACTCTCCTAACCGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGTGGGAAAGGACACCATTGTCTGAGCAGAACTCTCCTAACCGGC  650

seq1  AGTGGGACAGAAGCAACTGGAGTCCCACCATAGGGGCTCCCGCTACCCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACAGAAGCAACTGGAGTCCCACCATAGGGGCTCCCGCTACCCGA  700

seq1  GGGAAAGGGGCTTCCAGGAAGACTCTGACAAAGCAATCCAACGCTTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGGGCTTCCAGGAAGACTCTGACAAAGCAATCCAACGCTTGAGA  750

seq1  ACCAACTGCTTGACTGTCCTGGCTGTTAGCATCTGCCCCACTGACTCAGG  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACCAACTGCTTGACTGTCCTGGCTGTTAGCATCTGCCCCACTGACTCA-G  799

seq1  TCCCACTCTGTGGTCACCGCCTCCCCTGGATATGCCTCAGTTTCCTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTCTGTGGTCACCGCCTCCCCTGGATATGCCTCAGTTTCCTCTGA  849

seq1  AGCAAGTGAGTAGATCAGAGTATTTCTCTGGGGCTCCTGTCTCCTGCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTGAGTAGATCAGAGTATTTCTCTGGGGCTCCTGTCTCCTGCCAG  899

seq1  AGCAGACGGGCTCTCCCGTGCCTCTTCCTGGAAGTGGCTTTT-GGTTCCT  949
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  AGCAGACAGGCTCTCCCGTGCCTCTTCCTGGAAGTGGCTTTTGGGTTCCT  949

seq1  GCTACATCTGCTCCAGGCTCTTTCATCTACTTGAGGACCTTGCTGTGGGC  999
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCTACATCTGCTCCAGGCTCTTTCATCTACTTGA-GACCTTGCTGTGGGC  998

seq1  TGCTGATAGAAACAGATTTTAAATCATCCTTTGCCATGTCGAGTGC-AAA  1048
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  TGCTGATAGAAACAGATTTT-AATCATCCTTTGCCATGTCGAGTGCTAAA  1047

seq1  CACACCATCA-CTCCCGTG-CCTAACAGCATC  1078
      |||| ||||| |||||||| ||||||||||||
seq2  CACA-CATCACCTCCCGTGACCTAACAGCATC  1078