BAC Information

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BAC

Clone NameB6Ng01-314A24
Chromosome9 (Build37)
Map Location 96,396,706 - 96,538,429
singlet/doubletdoublet
Overlap geneLOC667174, Rasa2
Upstream gene2610101N10Rik, LOC100040097, Paqr9, Pcolce2, Trpc1, AI427122, 1700065D16Rik, Xrn1, Gk5, Tfdp2, 1110029I05Rik, Atp1b3, BC043934, Rnf7
Downstream geneZbtb38, EG622512, LOC100040230, LOC667216, Acpl2, LOC19034, LOC667226, Spsb4, LOC100040254, Slc25a36, EG622727, LOC384971, Trim42, Clstn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314A24.bB6Ng01-314A24.g
ACCGA105106GA105107
length583535
definitionB6Ng01-314A24.b B6Ng01-314A24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,396,706 - 96,397,295)(96,537,891 - 96,538,429)
sequence
tagttccatgtttctgcattaggaggccagggtgggtagctttctaacca
agcacaagtgtgacctgagcaggcatgcctttcttctcaggtggcattga
tctagttttgagttatatcctgacttttggggtgcaaggggtaggggtat
gtgagtattgtaatgttttcttctatattgcctcagcagccaccctgttt
tttacaaaaaaaaaattttttttaaatatctgttttatgtatatatttgc
atatagagcctggatgccagaagagggcatcagatcccattacagatggt
tgtgagcctccatgtggttgttgggaattgaactcagtccctctgggaga
acagccagtgctcttaaccaggaaaccatctctcccacccagctaccacc
cctttaatacgaggcttctcctgaggtttctgtggggcctaagagccaag
atcaagacttgaaagtgcccccgtcagagctgataagtctcattacttga
aagctgtggtcagccgcagggcttacctctgccctccagctttagacagc
gaatggttgctaggctctcctgctccctacctt
caggcagaagaacagacagaatgagaccctgtctcagaagtaaaataaaa
agaggctggagaaatggctaatccattaagagcgtttgttcttgcaaagg
acctgagcttggttcgcagtacactaatggaggctagctaacaactatct
atagatttagttccaggggacccaatgccctcttctgacctcttctgggt
gccaggtactcgtgtggtgcgcacatacacacatacatgcaagcaagcaa
aacatccactagacacataaaaaatatttaaatgaaagtaaatattaaaa
tataataaaattaaaaacttcggaccaaaagatagctcttacaagtcagt
tagaggctagtaataggatgtattagtattcttaaataggatggaactga
ccagctctagaaatagtttctagcatcaggatggtattcatttcattaac
agaaacggcaattttcacacttcgcacctttgaatgagcttgacttgtgg
tttgaaacaaatgaatgggcttttaaactagctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_96396706_96397295
seq2: B6Ng01-314A24.b_43_631

seq1  GAATTCTAGTTCCATGTTTCTGCATTAGGAGGCCAGGGTGGGTAGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTCCATGTTTCTGCATTAGGAGGCCAGGGTGGGTAGCTTTC  50

seq1  TAACCAAGCACAAGTGTGACCTGAGCAGGCATGCCTTTCTTCTCAGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGCACAAGTGTGACCTGAGCAGGCATGCCTTTCTTCTCAGGTGG  100

seq1  CATTGATCTAGTTTTGAGTTATATCCTGACTTTTGGGGTGCAAGGGGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGATCTAGTTTTGAGTTATATCCTGACTTTTGGGGTGCAAGGGGTAG  150

seq1  GGGTATGTGAGTATTGTAATGTTTTCTTCTATATTGCCTCAGCAGCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGTGAGTATTGTAATGTTTTCTTCTATATTGCCTCAGCAGCCACC  200

seq1  CTGTTTTTTACAAAAAAAAAATTTTTTTTAAATATCTGTTTTATGTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTTACAAAAAAAAAATTTTTTTTAAATATCTGTTTTATGTATAT  250

seq1  ATTTGCATATAGAGCCTGGATGCCAGAAGAGGGCATCAGATCCCATTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATATAGAGCCTGGATGCCAGAAGAGGGCATCAGATCCCATTACA  300

seq1  GATGGTTGTGAGCCTCCATGTGGTTGTTGGGAATTGAACTCAGTCCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGTGAGCCTCCATGTGGTTGTTGGGAATTGAACTCAGTCCCTCT  350

seq1  GGGAGAACAGCCAGTGCTCTTAACCAGGAAACCATCTCTCCCACCCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAACAGCCAGTGCTCTTAACCAGGAAACCATCTCTCCCACCCAGCT  400

seq1  ACCACCCCTTTAATACGAGGCTTCTCATGAGGTTTCTGTGGGGCCTAAGT  450
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  ACCACCCCTTTAATACGAGGCTTCTCCTGAGGTTTCTGTGGGGCCTAAGA  450

seq1  GCCAAGATCAAGACTTGTAAGTGCCCCCGTCAGAGCTGAGAAGTCACATT  500
      ||||||||||||||||| ||||||||||||||||||||| ||||| ||||
seq2  GCCAAGATCAAGACTTGAAAGTGCCCCCGTCAGAGCTGATAAGTCTCATT  500

seq1  ACTAGAAAGCTGTGGCCAGCCGCAGGGCTGAACTCAGCCCTCCAGCTTTA  550
      ||| ||||||||||| ||||||||||||| | ||| ||||||||||||||
seq2  ACTTGAAAGCTGTGGTCAGCCGCAGGGCTTACCTCTGCCCTCCAGCTTTA  550

seq1  GACAGCGAATGGATGCAAGGCTCTCCCTGCTCCCTACCTT  590
      |||||||||||| ||| ||||||| |||||||||||||||
seq2  GACAGCGAATGGTTGCTAGGCTCT-CCTGCTCCCTACCTT  589

seq1: chr9_96537891_96538429
seq2: B6Ng01-314A24.g_69_609 (reverse)

seq1  TTAGCTAGTTT-TAAGCCCATTCATTTGTTTCAAACCACAAGTC-AGCTC  48
      |||||||||||  ||||||||||||||||||||||||||||||| |||||
seq2  TTAGCTAGTTTAAAAGCCCATTCATTTGTTTCAAACCACAAGTCAAGCTC  50

seq1  ATTC-AAGGTGCGATGTGTGAAAATTGCCGTTTCTGTTAATGAAATGAAT  97
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTCAAAGGTGCGAAGTGTGAAAATTGCCGTTTCTGTTAATGAAATGAAT  100

seq1  A-CATCCTGATGCTAGAAACTATTTCTAGAGCTGGTCAGTTCCATCCTAT  146
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCTGATGCTAGAAACTATTTCTAGAGCTGGTCAGTTCCATCCTAT  150

seq1  TTCTGAATACTAATACATCCTATTACTAGCCTCTAACTGACTTGTAAGAG  196
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAATACTAATACATCCTATTACTAGCCTCTAACTGACTTGTAAGAG  200

seq1  CTATCTTTTGGTCCGAAGTTTTTAATTTTATTATATTTTAATATTTACTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTTTGGTCCGAAGTTTTTAATTTTATTATATTTTAATATTTACTT  250

seq1  TCATTTAAATATTTTTTATGTGTCTAGTGGATGTTTTGCTTGCTTGCATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAATATTTTTTATGTGTCTAGTGGATGTTTTGCTTGCTTGCATG  300

seq1  TATGTGTGTATGTGCGCACCACACGAGTACCTGGCACCCAGAAGAGGTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTATGTGCGCACCACACGAGTACCTGGCACCCAGAAGAGGTCA  350

seq1  GAAGAGGGCATTGGGTCCCCTGGAACTAAATCTATAGATAGTTGTTAGCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGCATTGGGTCCCCTGGAACTAAATCTATAGATAGTTGTTAGCT  400

seq1  AGCCTCCATTAGTGTACTGCGAACCAAGCTCAGGTCCTTTGCAAGAACAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCATTAGTGTACTGCGAACCAAGCTCAGGTCCTTTGCAAGAACAA  450

seq1  ACGCTCTTAATGGCTTAGCCATTTCTCCAGCCTCTGTTTTATTTTACTTC  496
      ||||||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  ACGCTCTTAATGGATTAGCCATTTCTCCAGCCTCT-TTTTATTTTACTTC  499

seq1  TGAGACAGGGTCTCATTCTGTAGGCCTGGCTGGCCTGGAATTC  539
      |||||||||||||||||||||  |     || |||||||||||
seq2  TGAGACAGGGTCTCATTCTGTCTGTTCTTCT-GCCTGGAATTC  541