BAC Information

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BAC

Clone NameB6Ng01-314K13
Chromosome9 (Build37)
Map Location 78,558,969 - 78,718,367
singlet/doubletdoublet
Overlap geneCd109, LOC384957, EG666456
Upstream geneGclc, LOC100042212, Elovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314K13.bB6Ng01-314K13.g
ACCGA105525GA105526
length440702
definitionB6Ng01-314K13.b B6Ng01-314K13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,717,921 - 78,718,367)(78,558,969 - 78,559,670)
sequence
ttcacattgtgacaattttcaattagaaaaatatgattcagcttccagag
gcagttcagctccttcattgtaatctgactctactcatataacctataaa
tttcagtgttgtactttttatttgagccctctctgcctctctgtctctgt
ctctctctgtctttctgtctctgtctctctctctctgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacacgagggtgtacatgtgt
ataggtgcctatggaggccagaagagggcactggatctcctggagctgga
gctggggtttaaggcaaatgtgagttacacaaagtgagaaatgaaaacaa
aactccagttctcttgaaaagagcaagtactaaaccgcctctccagccct
tatcctgtgtgggaagatttcttttattaaatactacttt
gaattccagagatctgaatttaggacctcttgcttgcataagacacttca
cagaaccctctctactgccctgataagcagtttctttttaaattgttttt
cctttttaattaatttttataattggacaaacaaggcgaagggtttgatt
atggcatcttcatttgtatgtagaaatgcctctatgcccctgctcactct
agctaacacactttctctctcccagtagcctccatttctgctttcacttc
acatatattccattaccctttcaccacattaggatccttttcgcccccac
cctttccatgctttccttcctagtttagtgtctcacaccccgtcctgtgc
ataaacacgtgtaaaaattaaaatctaggctcttcagttgagcgaaagca
catggtatttgttgagcactctgggtctgacttggtttaacacaacactt
tccagttccatttgttttcctgcaaatgctgtgatttaattttctttcag
gctaaacggaccttccgttgtgtatgtatggcacacattttcttcattca
ctcatctaggctgcttccatttctttggggttatgaatagcgcaggaaga
aacatgaatgggtaggttgtggttgagttagagtcctttcagtacatact
caagagtggcatagctgtgtcatggaatattgggtatatgtgtgtgtggt
gt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_78717921_78718367
seq2: B6Ng01-314K13.b_44_489 (reverse)

seq1  AAAGTAGTTTTTAATAAAAGAAATCTTCCAAAACAGGATAAGGGCTGGAG  50
      |||||||| |||||||||||||||||||| | ||||||||||||||||||
seq2  AAAGTAGTATTTAATAAAAGAAATCTTCCCACACAGGATAAGGGCTGGAG  50

seq1  AGGCGGTTTAGTACTTGCTCCTCTTCAAGAGAACTGGAGTTTGGTTTTCA  100
      ||||||||||||||||||| || ||||||||||||||||||| |||||||
seq2  AGGCGGTTTAGTACTTGCT-CTTTTCAAGAGAACTGGAGTTTTGTTTTCA  99

seq1  TTTCTCACTTTGCGTAACTCACATCTGCCTTAAACCCCAGCTCCAGCTCC  150
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  TTTCTCACTTTGTGTAACTCACATTTGCCTTAAACCCCAGCTCCAGCTCC  149

seq1  AGGAGATCCAGTGCCCTCTTCTGGCCTCCATAGGCACCTATACACATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCCAGTGCCCTCTTCTGGCCTCCATAGGCACCTATACACATGTA  199

seq1  CACCCTCGTGTACACACACACACACACACACACACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCGTGTACACACACACACACACACACACACACACACACACACACA  249

seq1  CACACAGAGAGAGAGAGACAGAGACAGAAAGACAGAGAGAGACAGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGAGAGAGAGACAGAGACAGAAAGACAGAGAGAGACAGAGACA  299

seq1  GAGAGGCAGAGAGGGCTCAAATAAAAAGTACAACACTGAAATTTATAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGAGGGCTCAAATAAAAAGTACAACACTGAAATTTATAGGT  349

seq1  TATATGAGTAGAGTCAGATTACAATGAAGGAGCTGAACTGCCTCTGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAGTAGAGTCAGATTACAATGAAGGAGCTGAACTGCCTCTGGAAG  399

seq1  CTGAATCATATTTTTCTAATTGAAAATTGTCACAATGTGAAGAATTC  447
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATCATATTTTTCTAATTGAAAATTGTCACAATGTGAAGAATTC  446

seq1: chr9_78558969_78559670
seq2: B6Ng01-314K13.g_68_769

seq1  GAATTCCAGAGATCTGAATTTAGGACCTCTTGCTTGCATAAGACACTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGATCTGAATTTAGGACCTCTTGCTTGCATAAGACACTTCA  50

seq1  CAGAACCCTCTCTACTGCCCTGATAAGCAGTTTCTTTTTAAATTGTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCCTCTCTACTGCCCTGATAAGCAGTTTCTTTTTAAATTGTTTTT  100

seq1  CCTTTTTAATTAATTTTTATAATTGGACAAACAAGGCGAAGGGTTTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTAATTAATTTTTATAATTGGACAAACAAGGCGAAGGGTTTGATT  150

seq1  ATGGCATCTTCATTTGTATGTAGAAATGCCTCTATGCCCCTGCTCACTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATCTTCATTTGTATGTAGAAATGCCTCTATGCCCCTGCTCACTCT  200

seq1  AGCTAACACACTTTCTCTCTCCCAGTAGCCTCCATTTCTGCTTTCACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACACACTTTCTCTCTCCCAGTAGCCTCCATTTCTGCTTTCACTTC  250

seq1  ACATATATTCCATTACCCTTTCACCACATTAGGATCCTTTTCGCCCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATTCCATTACCCTTTCACCACATTAGGATCCTTTTCGCCCCCAC  300

seq1  CCTTTCCATGCTTTCCTTCCTAGTTTAGTGTCTCACACCCCGTCCTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCATGCTTTCCTTCCTAGTTTAGTGTCTCACACCCCGTCCTGTGC  350

seq1  ATAAACACGTGTAAAAATTAAAATCTAGGCTCTTCAGTTGAGCGAAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACGTGTAAAAATTAAAATCTAGGCTCTTCAGTTGAGCGAAAGCA  400

seq1  CATGGTATTTGTTGAGCACTCTGGGTCTGACTTGGTTTAACACAACACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTATTTGTTGAGCACTCTGGGTCTGACTTGGTTTAACACAACACTT  450

seq1  TCCAGTTCCATTTGTTTTCCTGCAAATGCTGTGATTTAATTTTCTTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCCATTTGTTTTCCTGCAAATGCTGTGATTTAATTTTCTTTCAG  500

seq1  GCTAAACGGACCTTCCGTTGTGTATGTATGGCACACATTTTCTTCATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACGGACCTTCCGTTGTGTATGTATGGCACACATTTTCTTCATTCA  550

seq1  CTCATCTAGGCTGCTTCCATTTCTTTGGGGTTATGAATAGCGCAGGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTAGGCTGCTTCCATTTCTTTGGGGTTATGAATAGCGCAGGAAGA  600

seq1  AACATGAATGGGTAGGTTGTGGTTGAGTTAGAGTCCTTTCAGTACATACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAATGGGTAGGTTGTGGTTGAGTTAGAGTCCTTTCAGTACATACT  650

seq1  CAAGAGTGGCATAGCTGTGTCATGGAATATTGGGTATATGTGTGTGTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGGCATAGCTGTGTCATGGAATATTGGGTATATGTGTGTGTGGT  700

seq1  GT  702
      ||
seq2  GT  702