BAC Information

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BAC

Clone NameB6Ng01-316K04
Chromosome9 (Build37)
Map Location 89,983,799 - 89,984,890
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666747, LOC100039714, 4930579C12Rik, Bcl2a1b, Mthfs, AF529169, Tmed3, B230218L05Rik, Rasgrf1, Ctsh
Downstream geneMorf4l1, LOC621414, Adamts7, Tbc1d2b, LOC100039777, LOC100039925
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316K04.bB6Ng01-316K04.g
ACCGA106982GA106983
length1,2171,087
definitionB6Ng01-316K04.b B6Ng01-316K04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaccaaccactaatagaaaatgttaggttaaaaattatatctg
tttgaacacatgcagatgctttttcttgtcattagttcctaaatgataca
ccatagctactactatttgtataacattcacatctgattaagtggcaaat
aaggccagtatggtggcatgtgtccataatcccagcacttgggaagttgg
ggcagtaggatcaggagttcaagaccagccttagctaggtggatcttgtc
tccaaaacaaaactattgtaagtagaaattatttaaggtatatgagcaga
agtggaattgtataggttatatatgtgcaaattatatatgcatattatat
tttgaatgatggacctcagcatccaagattttttgatactcgcaaggtat
cctaaggatactgaagagtggctatatttggcatatagtcagaagagaac
tacaaaggtacaagagccttggacctacagagtctctggcagtttgattt
aatcaggaacatgtgagtgctgatgctgaaggtccttgtcctcagttgct
tcttgatcaaccaataaagatgccagcagtcaaaggctgggccaaaagaa
agaagagagacttccggttcccataggctaggtaagaggaggagatcgag
atatttggaggggaaagacggaacaaggagctataggggagatcttccaa
aatgtaggcagaaaaggaaagcagcccatggaagtgtcttgggcagcaag
actaatgggcttcacagaaggtaaccagggcaactaagttgaggatagat
ctaaagttgttgagctaaagataaaggtaaccaggcaactgcattgaagg
cagatttagaggtgttgagctaggagtaaagataagggcatgctggcctc
agaaaggcttagaagagcccagccgctgagccattaagacatggttaaaa
atgaactaatgtgtgtgtgttcttttcatccctaaggatcagagattact
cctggggcatggtacgcaaccttgcagcttcgcaaggaagcttcaaagct
gtgtagcccaaaactacacactacactgccagccccattggaccaatgga
aactatctccctgtattgctcttggtctaaggtttccttgacaactagaa
gtagaaccttctctagaagagacttccccaagtgttctttgttcgagtgc
ctcacccaaatgttgat
gaattccttgagcatcaaatttgggaccttttatttttcgggtaaggggg
ttcctttattccaaaccttttacctaacagtggagagaatcatttctgtc
ttctgattaaatatcttgaaactatatgtgatatttcattatctacattg
aaggcagatgaattttcattcaaatttgtcttctttttctgtccctgcat
atatgcccaaagttaaacttccttttacatttcttggtattttacagtgt
aaggtcttttggtttatgatctgttatacgggccaaagattaagtgtcta
gacttttaaatgtagatacatgcttatacacaacccctgggaagtacctt
atttcatatacatatactgtgttattcttcaatgtaccttgttcattcaa
caacacatgaaagctaactcaagaggggagacaaaaatcccaaaccaacc
aaaatactggctgaaataacagacaaggcaggcaggggacactgtattga
actttaaaaatggtgttaatatgagtaggcagtgggaaacctagcgacgg
ctcagcagttcagagcactcactggctgctctttcatttgccagcgccag
aagacagtaacagtacaacctgtacagctatgttcaacaaagactaatag
gacaaactttgttacatgcaagcaagataccaggtgtttatatagatgcc
acaaacacacaaggaagttaaatagccactttaagggttggttggttgtg
gttttttgtctcccagtagcatcactaaagcctacaaaactttatttctc
cataaacatgtttcctttgttgctgtggcaatccaactgcaaatttcaag
ggcatacagttcagagggacggggaagcatggttcagctcatgttggcag
gaaatttgtgatgcaaccctacttacatacatacagggcagtcagagcac
aggagggatagtccattcagatgggcctacttctccagacaggtctccta
gtggtgttacagctagagactcaatgtttaaccaattaatttatgggacc
aattcagtctcagtagtacatggtatagatgagtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_89983799_89984890
seq2: B6Ng01-316K04.g_69_1155

seq1  GAATTCCTTGAGCATCAAATTTGGGACCTTTTATTTTTCGGGTAAGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAGCATCAAATTTGGGACCTTTTATTTTTCGGGTAAGGGGG  50

seq1  TTCCTTTATTCCAAACCTTTTACCTAACAGTGGAGAGAATCATTTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTATTCCAAACCTTTTACCTAACAGTGGAGAGAATCATTTCTGTC  100

seq1  TTCTGATTAAATATCTTGAAACTATATGTGATATTTCATTATCTACATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTAAATATCTTGAAACTATATGTGATATTTCATTATCTACATTG  150

seq1  AAGGCAGATGAATTTTCATTCAAATTTGTCTTCTTTTTCTGTCCCTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGATGAATTTTCATTCAAATTTGTCTTCTTTTTCTGTCCCTGCAT  200

seq1  ATATGCCCAAAGTTAAACTTCCTTTTACATTTCTTGGTATTTTACAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCCAAAGTTAAACTTCCTTTTACATTTCTTGGTATTTTACAGTGT  250

seq1  AAGGTCTTTTGGTTTATGATCTGTTATACGGGCCAAAGATTAAGTGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTTTGGTTTATGATCTGTTATACGGGCCAAAGATTAAGTGTCTA  300

seq1  GACTTTTAAATGTAGATACATGCTTATACACAACCCCTGGGAAGTACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTAAATGTAGATACATGCTTATACACAACCCCTGGGAAGTACCTT  350

seq1  ATTTCATATACATATACTGTGTTATTCTTCAATGTACCTTGTTCATTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATATACATATACTGTGTTATTCTTCAATGTACCTTGTTCATTCAA  400

seq1  CAACACATGAAAGCTAACTCAAGAGGGGAGACAAAAATCCCAAACCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACATGAAAGCTAACTCAAGAGGGGAGACAAAAATCCCAAACCAACC  450

seq1  AAAATACTGGCTGAAATAACAGACAAGGCAGGCAGGGGACACTGTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTGGCTGAAATAACAGACAAGGCAGGCAGGGGACACTGTATTGA  500

seq1  ACTTTAAAAATGGTGTTAATATGAGTAGGCAGTGGGAAACCTAGCGACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAAATGGTGTTAATATGAGTAGGCAGTGGGAAACCTAGCGACGG  550

seq1  CTCAGCAGTTCAGAGCACTCACTGGCTGCTCTTTCATTTGCCAGCGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGTTCAGAGCACTCACTGGCTGCTCTTTCATTTGCCAGCGCCAG  600

seq1  AAGACAGTAACAGTACAACCTGTACAGCTATGTTCAACAAAGACTAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTAACAGTACAACCTGTACAGCTATGTTCAACAAAGACTAATAG  650

seq1  GACAAACTTTGTTACATGCAAGCAAGATACCAGGTGTTTATATAGATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACTTTGTTACATGCAAGCAAGATACCAGGTGTTTATATAGATGCC  700

seq1  ACAAACACACAAGGAAGTTAAATAGCCACTTTAAGGGTTGGTTGGTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACACAAGGAAGTTAAATAGCCACTTTAAGGGTTGGTTGGTTGTG  750

seq1  GTTTTTTGTCTCCCAGTAGCATCACTAAAGCCTACAAAACTTTATTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTCTCCCAGTAGCATCACTAAAGCCTACAAAACTTTATTTCTC  800

seq1  CATAAACATG-TTCCTTTGTTGCTGTGGCAAATCCAACTGCAAATTTCAA  849
      |||||||||| |||||||||||||||||| ||||||||||||||||||||
seq2  CATAAACATGTTTCCTTTGTTGCTGTGGC-AATCCAACTGCAAATTTCAA  849

seq1  -GGCATACAGTTCAGAGGGACGGGGAAGCATGGTTCAGCTCATGTTGGCA  898
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATACAGTTCAGAGGGACGGGGAAGCATGGTTCAGCTCATGTTGGCA  899

seq1  GGAAA-TTGTGATGCAA-CCTACTTACATACATACAGGCAAGTCAAGAAG  946
      ||||| ||||||||||| ||||||||||||||||||||  |||||   ||
seq2  GGAAATTTGTGATGCAACCCTACTTACATACATACAGGGCAGTCA--GAG  947

seq1  CACAGGAGGGATAGTCCATTCAGATGGGCCTACTTCTTCCAGACAGGTCT  996
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CACAGGAGGGATAGTCCATTCAGATGGGCCTACTTC-TCCAGACAGGTCT  996

seq1  CCTAAGTGGTGTTACCAGCTAGAGACTCAATGTTTAACAAATAAATTTAT  1046
      ||| |||||||||| ||||||||||||||||||||||| ||| |||||||
seq2  CCT-AGTGGTGTTA-CAGCTAGAGACTCAATGTTTAACCAATTAATTTAT  1044

seq1  GGGGACCATTTCAGTCTCAAGTAGTAACAT-GTATAGAATGAGTTTT  1092
       ||||||| ||||||||| |||||| |||| |||||| |||||||||
seq2  -GGGACCAATTCAGTCTC-AGTAGT-ACATGGTATAG-ATGAGTTTT  1087