BAC Information

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BAC

Clone NameB6Ng01-316L18
Chromosome9 (Build37)
Map Location 37,340,379 - 37,486,379
singlet/doubletdoublet
Overlap geneEsam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881
Upstream geneEG434396, A630095E13Rik, Acrv1, Chek1, Stt3a, Ei24, LOC627681, Fez1, Pknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479
Downstream geneEG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316L18.bB6Ng01-316L18.g
ACCGA107056GA107057
length957147
definitionB6Ng01-316L18.b B6Ng01-316L18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,485,766 - 37,486,379)(37,340,379 - 37,340,525)
sequence
gaattccaatttctctataatctcactgacatttgtcatcctggttattt
ttcttttttcttttttttctttttttttttttaacttttttcagttttgt
gcatacgtgtgtgggattaatctcttgtgctctgtgtaaaagcatcacct
gtcaataaaaagccagtggcctattagcaaaaggcaggaagtagagggtg
ggagttccagtaaatagattgacagtctgggaaagagtcaggaacaagaa
catttgccacacagtcaaactgatgaaactaagaagaggtaaccagccat
gtgacagacagagagaaaagcatgaatgggttaatatgaattaggagcta
gtcatccaacaagcctagcataagtcctaggcattaattcaggaactggg
gcatgggtggaaaagcctgtggttacacatgtgtatgtgtatgtgtatgt
gtgtgccattgtccatgaaaaccagaagagagcatcagatccaatggaac
tagagttccaggcagttgtgagctgccccacatgagtgctgggaatctaa
ccaaagtcctctgaaagagcaatacatggagactctttgctaagcccttt
ctgcagccccacccatctctttttaattatatgcatcttactggatgtaa
agtggtattgcaatgttagtttgctttataatttcttaatagctaatggt
gtttagcatcttttcatacgcttgtttgaaaatataaatcctttccttgg
ggaaatgtctaagtttatagattttcagttctgttatttttagtgttaaa
ttgtgaataaacaaaataaaaaggggggggttcactgccagatcccaagg
tcataaaaatatcttctgatgttatcttctgaggtttcatgcctttctaa
atgatttcttttaaaataaaacctcaacatatttggtttttagtggcttg
agaattt
ctgaatacactagggcaaggcaggcaatcttgttcaatcccccactgaat
ttttttgtgtatatatgcatgtttggatgtgtatgcatattgatgaatat
atgcatatgcatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37485766_37486379
seq2: B6Ng01-316L18.b_50_663 (reverse)

seq1  GGGTGGGGCTGCAGAAAGGGCTTAGCAAAGAGTCTCCATGTATTGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGCTGCAGAAAGGGCTTAGCAAAGAGTCTCCATGTATTGCTCTT  50

seq1  TCAGAGGACTTTGGTTAGATTCCCAGCACTCATGTGGGGCAGCTCACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGACTTTGGTTAGATTCCCAGCACTCATGTGGGGCAGCTCACAAC  100

seq1  TGCCTGGAACTCTAGTTCCATTGGATCTGATGCTCTCTTCTGGTTTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGAACTCTAGTTCCATTGGATCTGATGCTCTCTTCTGGTTTTCAT  150

seq1  GGACAATGGCACACACATACACATACACATACACATGTGTAACCACAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATGGCACACACATACACATACACATACACATGTGTAACCACAGGC  200

seq1  TTTTCCACCCATGCCCCAGTTCCTGAATTAATGCCTAGGACTTATGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCACCCATGCCCCAGTTCCTGAATTAATGCCTAGGACTTATGCTAG  250

seq1  GCTTGTTGGATGACTAGCTCCTAATTCATATTAACCCATTCATGCTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTGGATGACTAGCTCCTAATTCATATTAACCCATTCATGCTTTTC  300

seq1  TCTCTGTCTGTCACATGGCTGGTTACCTCTTCTTAGTTTCATCAGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTGTCACATGGCTGGTTACCTCTTCTTAGTTTCATCAGTTTGA  350

seq1  CTGTGTGGCAAATGTTCTTGTTCCTGACTCTTTCCCAGACTGTCAATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGGCAAATGTTCTTGTTCCTGACTCTTTCCCAGACTGTCAATCTA  400

seq1  TTTACTGGAACTCCCACCCTCTACTTCCTGCCTTTTGCTAATAGGCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGAACTCCCACCCTCTACTTCCTGCCTTTTGCTAATAGGCCACT  450

seq1  GGCTTTTTATTGACAGGTGATGCTTTTACACAGAGCACAAGAGATTAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTATTGACAGGTGATGCTTTTACACAGAGCACAAGAGATTAATC  500

seq1  CCACACACGTATGCACAAAACTGAAAAAAGTTAAAAAAAAAAAAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACGTATGCACAAAACTGAAAAAAGTTAAAAAAAAAAAAAGAAAA  550

seq1  AAAAGAAAAAAGAAAAATAACCAGGATGACAAATGTCAGTGAGATTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAAGAAAAATAACCAGGATGACAAATGTCAGTGAGATTATAG  600

seq1  AGAAATTGGAATTC  614
      ||||||||||||||
seq2  AGAAATTGGAATTC  614

seq1: chr9_37340379_37340525
seq2: B6Ng01-316L18.g_71_217

seq1  CTGAATACACTAGGGCAAGGCAGGCAATCTTGTTCAATCCCCCACTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATACACTAGGGCAAGGCAGGCAATCTTGTTCAATCCCCCACTGAAT  50

seq1  TTTTTTGTGTATATATGCATGTTTGGATGTGTATGCATATTGATGAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTGTATATATGCATGTTTGGATGTGTATGCATATTGATGAATAT  100

seq1  ATGCATATGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATGCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  147