BAC Information

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BAC

Clone NameB6Ng01-318O19
Chromosome9 (Build37)
Map Location 40,991,147 - 40,992,252
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr986, Zfp202, Scn3b, Gramd1b, LOC270148, 9030425E11Rik, LOC100043076, LOC100043071, Hspa8, Bsx, 4931429I11Rik, Crtam, 2810457I06Rik, LOC628495
Downstream geneLOC100042464, EG667566, 6720432D03Rik, Sorl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318O19.bB6Ng01-318O19.g
ACCGA108691GA108692
length1,106318
definitionB6Ng01-318O19.b B6Ng01-318O19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggaaggaagtcctttcgtttggtcaggaccatcatcagtcat
atatccctcataagctttgcccacacacctctcctgacaagtgtcaacca
cgtgtttgcctttcagcttgctgcagtcagatttaggggactgaagaaag
tggcacatgctaggttttggcgtacagagaaaggcttgtttcagcttctg
aagatggggacatgggcaggcagcccagtgaggccttgcacttaggacat
gaagagaggagaatctgacgttcatgtcaattgaactactcaacaaaacg
ctgccacagagtaggggtgtggcggcacaacaataacaaaagtacaagag
aagggagcacattttaacttggggcataattccaagctaagacgccatca
gcgagtatttcatgttgtcgttggctgcttcgttacatccatagcgcgca
gacaactcaacccccatatccagacacagcatagccaatttgcctcggtt
acatcttcttcactcttggttaagaatctctaaaggagaaatgagtatgt
gaagatcagctttcgaggcgggcgtggtagagcacacctgtgactttggc
agtcgagaggcaggagaatcatgaaacgtcaatgccactggggtcacaca
gtgagttcaaagccaactgtggctccattgtaagatcctgtcttgaaaca
atttattttttttcagtccatcagcaagcaatttatatacattatatatt
atatacattatatacagtgtatattaagaccagttttggatcttagtcat
gtgagtatcattgtacccgcctacgtaatccacataatcagtgtaaaaac
tggcaaacacaggcattagctgttgggcatacacttgtcagagggaacac
agtgaagaattcaaagcccatctgtctgggcaaatggcttgtttgtctct
gaaatggggtctcaactatgtaggtagctagactgctgtgaactcttact
tgactgcctcctaaatgctgggtgttcctccaccaccagtgttcatcctt
tagagagactaaattccagctttgttcatggcttgacaaacactctttat
cactga
catccagtaggcaggaagacagaagctagaagctaactatctgattatag
tgggggtaagaactgtggagggaagtgggtatgatggcagacatctttga
tccaacactgggggaagcagaagtcagcctggtctactacatagagaatt
ccccaccagccagggctacaaagtgagaccttgactcaatagtaatagta
gtagtaatagtagtagtagtggtagtagtagtagtggtggtagtagtagt
ggtagcggccgtagtggccgtggtcgtccttctctttttctctatccgtt
cccgcttcagtagtgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_40991147_40992252
seq2: B6Ng01-318O19.b_45_1150 (reverse)

seq1  TCAGTTGAT-AAGAGTGTTTGTCAAG-CATGAACAAAGCCCGGGATTTAG  48
      |||| |||| |||||||||||||||| ||||||||||| | || ||||||
seq2  TCAG-TGATAAAGAGTGTTTGTCAAGCCATGAACAAAG-CTGGAATTTAG  48

seq1  TCTCT-AAAAGGATGAACACTGGT-GTGGAGGAACACCCAGCATTAGGGA  96
      |||||  ||||||||||||||||| ||||||||||||||||||||  |||
seq2  TCTCTCTAAAGGATGAACACTGGTGGTGGAGGAACACCCAGCATTTAGGA  98

seq1  GGCAGTCAAGTAAGAGGTTCACAGCAGTCTTAGCTACCTACATAGTTGGA  146
      ||||||||||||||| ||||||||||||| ||||||||||||||||| ||
seq2  GGCAGTCAAGTAAGA-GTTCACAGCAGTC-TAGCTACCTACATAGTT-GA  145

seq1  GACCCCATTTCAGAGACAAAACAAGCCATTTGCCCAGACAGATGGGCTTT  196
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GACCCCATTTCAGAGAC-AAACAAGCCATTTGCCCAGACAGATGGGCTTT  194

seq1  GAATTCTTCACTGTGTTCCCTCTGACAAGTGTATG-CCAACAGCTAATGC  245
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAATTCTTCACTGTGTTCCCTCTGACAAGTGTATGCCCAACAGCTAATGC  244

seq1  CTGTGTTTGCCAGTTTTTACACTGATTATGTGGATTACGTAGGCGGGTAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTTGCCAGTTTTTACACTGATTATGTGGATTACGTAGGCGGGTAC  294

seq1  AATGATACTCACATGACTAAGATCCAAAACTGGTCTTAATATACACTGTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACTCACATGACTAAGATCCAAAACTGGTCTTAATATACACTGTA  344

seq1  TATAATGTATATAATATATAATGTATATAAATTGCTTGCTGATGGACTG-  394
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATAATGTATATAATATATAATGTATATAAATTGCTTGCTGATGGACTGA  394

seq1  AAAAAAATAAATTGTTTCAAGACAGGATCTTACAATGGAGCCACAGTTGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAATTGTTTCAAGACAGGATCTTACAATGGAGCCACAGTTGG  444

seq1  CTTTGAACTCACTGTGTGACCCCAGTGGCATTGACGTTTCATGATTCTCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACTCACTGTGTGACCCCAGTGGCATTGACGTTTCATGATTCTCC  494

seq1  TGCCTCTCGACTGCCAAAGTCACAGGTGTGCTCTACCACGCCCGCCTCGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCGACTGCCAAAGTCACAGGTGTGCTCTACCACGCCCGCCTCGA  544

seq1  AAGCTGATCTTCACATACTCATTTCTCCTTTAGAGATTCTTAACCAAGAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGATCTTCACATACTCATTTCTCCTTTAGAGATTCTTAACCAAGAG  594

seq1  TGAAGAAGATGTAACCGAGGCAAATTGGCTATGCTGTGTCTGGATATGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGATGTAACCGAGGCAAATTGGCTATGCTGTGTCTGGATATGGG  644

seq1  GGTTGAGTTGTCTGCGCGCTATGGATGTAACGAAGCAGCCAACGACAACA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGTTGTCTGCGCGCTATGGATGTAACGAAGCAGCCAACGACAACA  694

seq1  TGAAATACTCGCTGATGGCGTCTTAGCTTGGAATTATGCCCCAAGTTAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATACTCGCTGATGGCGTCTTAGCTTGGAATTATGCCCCAAGTTAAA  744

seq1  ATGTGCTCCCTTCTCTTGTACTTTTGTTATTGTTGTGCCGCCACACCCCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTCCCTTCTCTTGTACTTTTGTTATTGTTGTGCCGCCACACCCCT  794

seq1  ACTCTGTGGCAGCGTTTTGTTGAGTAGTTCAATTGACATGAACGTCAGAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTGGCAGCGTTTTGTTGAGTAGTTCAATTGACATGAACGTCAGAT  844

seq1  TCTCCTCTCTTCATGTCCTAAGTGCAAGGCCTCACTGGGCTGCCTGCCCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTCTTCATGTCCTAAGTGCAAGGCCTCACTGGGCTGCCTGCCCA  894

seq1  TGTCCCCATCTTCAGAAGCTGAAACAAGCCTTTCTCTGTACGCCAAAACC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCATCTTCAGAAGCTGAAACAAGCCTTTCTCTGTACGCCAAAACC  944

seq1  TAGCATGTGCCACTTTCTTCAGTCCCCTAAATCTGACTGCAGCAAGCTGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATGTGCCACTTTCTTCAGTCCCCTAAATCTGACTGCAGCAAGCTGA  994

seq1  AAGGCAAACACGTGGTTGACACTTGTCAGGAGAGGTGTGTGGGCAAAGCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAACACGTGGTTGACACTTGTCAGGAGAGGTGTGTGGGCAAAGCT  1044

seq1  TATGAGGGATATATGACTGATGATGGTCCTGACCAAACGAAAGGACTTCC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGGATATATGACTGATGATGGTCCTGACCAAACGAAAGGACTTCC  1094

seq1  TTCCCTGAATTC  1106
      ||||||||||||
seq2  TTCCCTGAATTC  1106