BAC Information

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BAC

Clone NameB6Ng01-320E23
Chromosome9 (Build37)
Map Location 76,766,188 - 76,767,101
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620071, Hmgcll1, Gfral, Hcrtr2, C530008M07Rik
Downstream geneTinag, LOC436082, 2310046A06Rik, 5730403I07Rik, Lrrc1, Klhl31, Gclc, LOC100042212, Elovl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320E23.bB6Ng01-320E23.g
ACCGA109711GA109712
length9861,168
definitionB6Ng01-320E23.b B6Ng01-320E23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagaaatgtcttaccactaacatatcttgaaatcatgcttcag
tgcagcattcatccactgtcctggaatgagatttcattcatgtatcaatt
tttcagatacaattttctcttagttataacactgctattttaatggcggt
cactagaataattataactatgcttcaaaacagcaagtctattaagtcag
aaaaaacaaacaaacaaaacatctgtctcatgtaggcaaaaggaattgcc
acttgactcccctttaaaataagaataaagaatctccacaaagaatatat
tgtgtggcatcattaataatcactgtgtatttagtacgacaacagagcat
gcttgccttcacttaataagagaaagggaaacgtgtaacattttgcagcc
acaagtgtggcatctgctttttattttttttattttttattttcttatta
gatattttctttatatacatttcaaatgctatcccaaaagttccctatac
ccccctcctccctgctcccctacccacccactcctacttcttggccctag
cattcccctgtactggggcatataaagtttgcaataccaaggggcttctc
ttcccagtgatggccgactaggccatcttctgctaaatacacagctagag
atatgagctctgggagtactggttagttcatattgttgttccacctatag
ggttgcagaccccttcagctccttgggtgctttctctagcttctccattg
ggggccctgtgttccatcttgtagatgactgtaagcatccacttctgtat
ttaccagtcactggcatagcctcacatgagacagctatatcaggtccttt
cagcaaaatttttctggcatatgcaatagtgtctgggtttggaggctgat
tatgggatggatccccgggtggggtagtctctggttagtccatccttttg
tctagctccaaactttgtctctgtaactctttcatg

gaattctttgcttagctctgtaccccatttttaatagggttatttggttt
tgttgttgttttgttttgtttttttggtatctaacttcttgtgtttttta
tatattttgaatactagacctttataggattagctaagatcctttccaaa
tctgtaggctattgttttgttctatagatagtttcctttgccttacagaa
gcttttcagtttatggggtcctatttatcagttgctgatcattttactta
tagggtcatggatgctttgaaatgtgtatgcctagtacctatgcaggcca
gaagagggccctggatctggagttacagatcattgtgaactgtcatgtgg
tgttgagaactgaacatcgatcctctgaaaaaacagtacatgctcttaac
cacataaccttccccgcagttccacaaacagattttggttcaaggagtta
tatgaaagtattctttttttaaaattggatattttacttatttacatttc
aaatgttataccctttcctggtttcccctccggaaatcccctatccatct
tccctccccctgctcctatgagtgtgctcacccacccacccactcctgcc
tccctgtcctggcatttccctacactggggcatagagacttcccaggtcc
aagggcctctcctcccactgatatataacaaggccatcctctgttacata
tgtggctggaaccatgggtccctctatgtgtactctttggttggtgattt
agttatatggaagtattcttttttttttttcttagatattttctttattt
acatttaaaatgttattcccctttcctagtttcccctctgaaaattcctt
atcctctcctccctccccctgttcctcaacccacccactcccattcctgg
tcctggcattcccctatactggggcctagagccttcacaggaccaagggc
ctctcctcacattgatgaccgactatgccatcctctgctacaaataatag
ctagagccacaagtttcaccatgtgttttctttgatggttggtataggtt
caaagggctctgacgttacttgattagttcataatgaatgttcatctatg
agctttcaatccgttcagcttcatggccatgctcaggctccctcaatggg
gaatcctcgtggtgatcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_76766188_76767101
seq2: B6Ng01-320E23.b_44_956

seq1  GAATTCTAAGAAATGTCTTACCACTAACATATCTTGAAATCATGCTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGAAATGTCTTACCACTAACATATCTTGAAATCATGCTTCAG  50

seq1  TGCAGCATTCATCCACTGTCCTGGAATGAGATTTCATTCATGTATCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCATTCATCCACTGTCCTGGAATGAGATTTCATTCATGTATCAATT  100

seq1  TTTCAGATACAATTTTCTCTTAGTTATAACACTGCTATTTTAATGGCGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATACAATTTTCTCTTAGTTATAACACTGCTATTTTAATGGCGGT  150

seq1  CACTAGAATAATTATAACTATGCTTCAAAACAGCAAGTCTATTAAGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAATAATTATAACTATGCTTCAAAACAGCAAGTCTATTAAGTCAG  200

seq1  AAAAAACAAACAAACAAAACATCTGTCTCATGTAGGCAAAAGGAATTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAACAAACAAAACATCTGTCTCATGTAGGCAAAAGGAATTGCC  250

seq1  ACTTGACTCCCCTTTAAAATAAGAATAAAGAATCTCCACAAAGAATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACTCCCCTTTAAAATAAGAATAAAGAATCTCCACAAAGAATATAT  300

seq1  TGTGTGGCATCATTAATAATCACTGTGTATTTAGTACGACAACAGAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGCATCATTAATAATCACTGTGTATTTAGTACGACAACAGAGCAT  350

seq1  GCTTGCCTTCACTTAATAAGAGAAAGGGAAACGTGTAACATTTTGCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCCTTCACTTAATAAGAGAAAGGGAAACGTGTAACATTTTGCAGCC  400

seq1  ACAAGTGTGGCATCTGCTTTTTATTTTTTTTATTTTTTATTTTCTTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGTGGCATCTGCTTTTTATTTTTTTTATTTTTTATTTTCTTATTA  450

seq1  GATATTTTCTTTATATACATTTCAAATGCTATCCCAAAAGTTCCCTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTCTTTATATACATTTCAAATGCTATCCCAAAAGTTCCCTATAC  500

seq1  CCCCCTCCTCCCTGCTCCCCTACCCACCCACTCCTACTTCTTGGCCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCTCCCTGCTCCCCTACCCACCCACTCCTACTTCTTGGCCCTAG  550

seq1  CATTCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCTTCTC  600

seq1  TTCCCAGTGATGGCCGACTAGGCCATCTTCTGCTAAATACACAGCTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGTGATGGCCGACTAGGCCATCTTCTGCTAAATACACAGCTAGAG  650

seq1  ATATGAGCTCTGGGAGTACTGGTTAGTTCATATTGTTGTTCCACCTATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGCTCTGGGAGTACTGGTTAGTTCATATTGTTGTTCCACCTATAG  700

seq1  GGTTGCAGACCCCTTCAGCTCCTTGGGTGCTTTCTCTAGCTTCTCCATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCAGACCCCTTCAGCTCCTTGGGTGCTTTCTCTAGCTTCTCCATTG  750

seq1  GGGGCCCTGTGTTCCATCTTGTAGATGACTGTAAGCATCCACTTCTGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCCTGTGTTCCATCTTGTAGATGACTGTAAGCATCCACTTCTGTAT  800

seq1  TTACCAGTCACTGGCATAGCCTCACATGAGACAGCTATATCAGGGTCCTT  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTACCAGTCACTGGCATAGCCTCACATGAGACAGCTATATCA-GGTCCTT  849

seq1  TCAGCAAAATTTTTCTGGCATATGCAATAGTGTCTGGGTTTGGAGGCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAAATTTTTCTGGCATATGCAATAGTGTCTGGGTTTGGAGGCTGA  899

seq1  TTATGGGATGGATC  914
      ||||||||||||||
seq2  TTATGGGATGGATC  913


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