BAC Information

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BAC

Clone NameB6Ng01-321N10
Chromosome9 (Build37)
Map Location 38,464,664 - 38,465,823
singlet/doubletsinglet
Overlap geneOlfr916
Upstream geneTbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915
Downstream geneOlfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321N10.bB6Ng01-321N10.g
ACCGA110843GA110844
length1,1941,148
definitionB6Ng01-321N10.b B6Ng01-321N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggcccatacctaaacatgataaaagcaatctacagcaatcca
gtagccaacatcaaagtagatggagagaagctggaagcaatcccagaaaa
atcagggactagacaaggctgcccactttctccctacctcttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaacggg
aaacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagaggactcctaaacc
tgataaacagcttcaatcaagtagctggatataaaactaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
agaaacaacacccttcgcaatagtcacaaataacataaaatattttggtg
tgactctaactaaggaagtgaaagatctgtatgataagaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ttcatggattgacaggatcaatatagtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcagttcttc
aacgaattagaaagggcaatcggcagattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctgatggaatca
ccatgtcggacctaaaactgtactacagagcaattgtaatcaaaactgca
tggtactagtatagtgacagacaagtagaccaatggaacagaactgaaga
cccagagatgaacccacacaccttggtcacttgatctttgacaagggagc
taaaaccatccagtggaaaaaaagacagcattttcaacaaatggtgctgg
cacaactggtggttatcatgtagaagaatgagaattgatccattcctatc
tcctatttgtactaaggtcaatctagtggattagactccacaataaaacc
agagacactgaacttatagagaaaaaggtaagggaaaagctcgagctatg
gtacaagggaaaatctgatagaacagccatggtctggctgtagatcggaa
tcgataatggactcattaaattgccaacattctcgtcaaggcca
gaattctcaccttcacacccctatgtactttttcctctttaacttgtcct
ttgtagacttctgctattcttctgtgttcactccacaaatgttgatgaac
tttataacaaggaagaatacaatttcttacatggaatgtatgagccaact
ttatttcttttgtttttttgttatttctgagtgttatgtgttgacttcaa
tggcctatgatcgctatgtggccatttgtaaaccactgctgtataatctt
gtcatgtcctctaaattatgtttgaacctaatgcttgtttcctactttat
tgcattttctgagtctgtggctcacactgtttgcataatgagactgaact
tctgtgatgccaacaaaatcaaccactacttctgtgatattccacctttg
ctccaactttcctgtacaaccacatatatcaacaagcttgtagtttttgt
tgcttctagcatcaatatcattgttcccatttcaactatatttatttcct
atggttttattctctccagcatctttcacatccattcttctgaaggcagg
tccaaagctttcagcacctgtagctcacacatcattgctgcttttctgtt
ctttggttcaggtgcatttatgtatttccaaccatcctcagctgagtcta
tggatgaaggaaaaatctcttctgtcttttatactaatgtgattcccatg
atgaatcctctactctacagcttgaggaacaaagacataaaagtggctct
gaggaaaaccctgagcaagaggaacatttaactgtatggtgttgacttta
tgcatcttagtttgggcagaaagatatttactatttatcagcaatatttt
agtgcaagattttacctagattttttccagcaaatattctatttagagcg
ggacagtgatggtacatgcctttaatcccagcacttggggaggcagaggc
aggcagatttctgtgtttgaggccaggctgtttgtacagagtgagttaca
ggcagccagggctacaaagagaaccctgttcttgaaaaacaaataaatta
attaattaataaataaaaagagagaaaattcttcttagtcagtttgaata
gtcagaaaatacttgtttaattatatagcttaggtatggtcttttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38464664_38465823
seq2: B6Ng01-321N10.g_65_1212 (reverse)

seq1  TACAAAAAACCATA-CTAGGCTATATAATTATAACAAGTA-TTTCTGACT  48
      ||||||| |||||| ||| |||||||||||| |||||||| |||||||||
seq2  TACAAAAGACCATACCTAAGCTATATAATTA-AACAAGTATTTTCTGACT  49

seq1  ATTCAAAACTGGAACTAAGTAGAATTTTTTCTCTTCTTTTTTTTATTTTA  98
      |||| ||||||  |||||| |||||||| ||||      |||||||||  
seq2  ATTC-AAACTG--ACTAAGAAGAATTTTCTCTC------TTTTTATTT--  88

seq1  TTTTATTTATTTATTTATTTTGTTTTTTTCAAG-ACAGGGTTTCTCTTTG  147
       || ||| ||| |||||||   | ||||||||| |||||| |||||||||
seq2  ATTAATTAATTAATTTATT---TGTTTTTCAAGAACAGGG-TTCTCTTTG  134

seq1  TAGCCCTGGCTGCCCTGTAACTCACTCTGTAC-AACAGCCTGGCCTCAAA  196
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  TAGCCCTGGCTG-CCTGTAACTCACTCTGTACAAACAGCCTGGCCTCAAA  183

seq1  CACAGAAATCTGCCTGCCTCTGCCT-CCCAAGTGCTGGGATTAAAGGCAT  245
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CACAGAAATCTGCCTGCCTCTGCCTCCCCAAGTGCTGGGATTAAAGGCAT  233

seq1  GTACCATCACTGTCCCGCTCTAAATAGAATATTTGCTGGAAAAAATCTAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCACTGTCCCGCTCTAAATAGAATATTTGCTGGAAAAAATCTAG  283

seq1  GTAAAATCTTGCACTAAAATATTGCTGATAAATAGTAAATATCTTTCTGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATCTTGCACTAAAATATTGCTGATAAATAGTAAATATCTTTCTGC  333

seq1  CCAAACTAAGATGCATAAAGTCAACACCATACAGTTAAATGTTCCTCTTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTAAGATGCATAAAGTCAACACCATACAGTTAAATGTTCCTCTTG  383

seq1  CTCAGGGTTTTCCTCAGAGCCACTTTTATGTCTTTGTTCCTCAAGCTGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGTTTTCCTCAGAGCCACTTTTATGTCTTTGTTCCTCAAGCTGTA  433

seq1  GAGTAGAGGATTCATCATGGGAATCACATTAGTATAAAAGACAGAAGAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAGGATTCATCATGGGAATCACATTAGTATAAAAGACAGAAGAGA  483

seq1  TTTTTCCTTCATCCATAGACTCAGCTGAGGATGGTTGGAAATACATAAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTTCATCCATAGACTCAGCTGAGGATGGTTGGAAATACATAAAT  533

seq1  GCACCTGAACCAAAGAACAGAAAAGCAGCAATGATGTGTGAGCTACAGGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGAACCAAAGAACAGAAAAGCAGCAATGATGTGTGAGCTACAGGT  583

seq1  GCTGAAAGCTTTGGACCTGCCTTCAGAAGAATGGATGTGAAAGATGCTGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGCTTTGGACCTGCCTTCAGAAGAATGGATGTGAAAGATGCTGG  633

seq1  AGAGAATAAAACCATAGGAAATAAATATAGTTGAAATGGGAACAATGATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAAAACCATAGGAAATAAATATAGTTGAAATGGGAACAATGATA  683

seq1  TTGATGCTAGAAGCAACAAAAACTACAAGCTTGTTGATATATGTGGTTGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCTAGAAGCAACAAAAACTACAAGCTTGTTGATATATGTGGTTGT  733

seq1  ACAGGAAAGTTGGAGCAAAGGTGGAATATCACAGAAGTAGTGGTTGATTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAGTTGGAGCAAAGGTGGAATATCACAGAAGTAGTGGTTGATTT  783

seq1  TGTTGGCATCACAGAAGTTCAGTCTCATTATGCAAACAGTGTGAGCCACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCATCACAGAAGTTCAGTCTCATTATGCAAACAGTGTGAGCCACA  833

seq1  GACTCAGAAAATGCAATAAAGTAGGAAACAAGCATTAGGTTCAAACATAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAAAATGCAATAAAGTAGGAAACAAGCATTAGGTTCAAACATAA  883

seq1  TTTAGAGGACATGACAAGATTATACAGCAGTGGTTTACAAATGGCCACAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGGACATGACAAGATTATACAGCAGTGGTTTACAAATGGCCACAT  933

seq1  AGCGATCATAGGCCATTGAAGTCAACACATAACACTCAGAAATAACAAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATCATAGGCCATTGAAGTCAACACATAACACTCAGAAATAACAAAA  983

seq1  AAACAAAAGAAATAAAGTTGGCTCATACATTCCATGTAAGAAATTGTATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGAAATAAAGTTGGCTCATACATTCCATGTAAGAAATTGTATT  1033

seq1  CTTCCTTGTTATAAAGTTCATCAACATTTGTGGAGTGAACACAGAAGAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGTTATAAAGTTCATCAACATTTGTGGAGTGAACACAGAAGAAT  1083

seq1  AGCAGAAGTCTACAAAGGACAAGTTAAAGAGGAAAAAGTACATAGGGGTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGTCTACAAAGGACAAGTTAAAGAGGAAAAAGTACATAGGGGTG  1133

seq1  TGAAGGTGAGAATTC  1160
      |||||||||||||||
seq2  TGAAGGTGAGAATTC  1148