MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-325I12
Chromosome	9 (Build37)
Map Location	13,834,557 - 13,955,437
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC100039729, LOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329
Downstream gene	Sesn3, Endod1, LOC665351, EG547035, Jmjd2d, 0610040D20Rik, Amotl1, EG665374, Piwil4, Fut4, 1700012B09Rik, Ankrd49, Mre11a, LOC100040259, Gpr83, Folr4, Panx1, Hephl1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Maml2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270118 MGI:2389460
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 9 Proteins

name	Mtmr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77116 MGI:1924366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cep57 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74360 MGI:1915551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810485I05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72826 MGI:1920076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665329 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665329
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Sesn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75747 MGI:1922997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Endod1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71946 MGI:1919196
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665351 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665351
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG547035 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547035 MGI:3644125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	Jmjd2d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244694 MGI:3606484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	0610040D20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66070 MGI:1913320
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amotl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75723 MGI:1922973
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665374 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665374 MGI:3644538
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Piwil4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330890 MGI:3041167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fut4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14345 MGI:95594
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700012B09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69325 MGI:1916575
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankrd49 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56503 MGI:1930842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mre11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17535 MGI:1100512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040259 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 376 ESTs, 5 Proteins

name	Gpr83 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14608 MGI:95712
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Folr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64931 MGI:1929185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Panx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:55991 MGI:1860055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hephl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244698 MGI:2685355
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins

name	Maml2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259825 GeneID:270118 MGI:2389460
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 9 Proteins product : mastermind like 2 (Drosophila) transcript_id : XM_001481278.1

name	Mtmr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053953 GeneID:77116 MGI:1924366
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotubularin related protein 2 transcript_id : NM_023858.2

name	Cep57 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980864 GeneID:74360 MGI:1915551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 57 transcript_id : NM_026665.2

name	2810485I05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130382 GeneID:72826 MGI:1920076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810485I05 gene transcript_id : NM_176836.3

name	Sesn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349199 GeneID:75747 MGI:1922997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sestrin 3 transcript_id : NM_030261.4

name	Endod1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803205 GeneID:71946 MGI:1919196
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endonuclease domain containing 1 transcript_id : NM_028013.2

name	EG547035 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259827 GeneID:547035 MGI:3644125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG547035 transcript_id : XM_976347.2

name	Jmjd2d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116174755 GeneID:244694 MGI:3606484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : jumonji domain containing 2D transcript_id : NM_173433.2

name	0610040D20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116174750 GeneID:66070 MGI:1913320
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610040D20 gene transcript_id : NM_023153.3

name	Amotl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487106 GeneID:75723 MGI:1922973
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiomotin-like 1 transcript_id : NM_001081395.1

name	EG665374 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385991 GeneID:665374 MGI:3644538
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG665374 transcript_id : XM_976463.1

name	Piwil4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138555 GeneID:330890 MGI:3041167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : piwi-like homolog 4 (Drosophila) transcript_id : NM_177905.3

name	Fut4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802526 GeneID:14345 MGI:95594
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fucosyltransferase 4 transcript_id : NM_010242.3

name	1700012B09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142355293 GeneID:69325 MGI:1916575
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700012B09 gene transcript_id : NM_029306.2

name	Ankrd49 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803047 GeneID:56503 MGI:1930842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 49 transcript_id : NM_019683.3

name	Mre11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41056098 GeneID:17535 MGI:1100512
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meiotic recombination 11 homolog A (S. cerevisiae) transcript_id : NM_018736.2

name	LOC100040259 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259835 GeneID:100040259
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 376 ESTs, 5 Proteins product : similar to macrophage migration inhibitory factor transcript_id : XM_001474201.1

name	Gpr83 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361503 GeneID:14608 MGI:95712
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 83 transcript_id : NM_010287.2

name	Folr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803239 GeneID:64931 MGI:1929185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : folate receptor 4 (delta) transcript_id : NM_176807.3

name	Folr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12584981 GeneID:64931 MGI:1929185
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : folate receptor 4 (delta) transcript_id : NM_022888.1

name	Panx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86262133 GeneID:55991 MGI:1860055
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pannexin 1 transcript_id : NM_019482.2

name	Hephl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259829 GeneID:244698 MGI:2685355
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins product : hephaestin-like 1 transcript_id : XM_146812.7

name	Maml2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259826 GeneID:270118 MGI:2389460
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to mKIAA1819 protein protein_id : XP_001481328.1 transl_except : (pos:13415221..13415223,aa:OTHER) transl_except : (pos:13415263..13415265,aa:OTHER)

name	Mtmr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053954 CCDS:CCDS22818.1 GeneID:77116 MGI:1924366
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA] GO_process : GO:0046839 - phospholipid dephosphorylation [Evidence IEA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 product : myotubularin related protein 2 protein_id : NP_076347.2

name	Cep57 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980865 GeneID:74360 MGI:1915551
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005874 - microtubule [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0017134 - fibroblast growth factor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence ISS]; GO:0000060 - protein import into nucleus, translocation [Evidence IMP] codon_start : 1 exception : mismatches in translation note : testis-specific protein 57 product : translokin protein_id : NP_080941.2

name	2810485I05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28849885 CCDS:CCDS22819.1 GeneID:72826 MGI:1920076
definition	codon_start : 1 product : hypothetical protein LOC72826 protein_id : NP_789806.1

name	Sesn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674247 CCDS:CCDS22820.1 GeneID:75747 MGI:1922997
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007050 - cell cycle arrest [Evidence IEA] codon_start : 1 product : sestrin 3 protein_id : NP_084537.2

name	Endod1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794394 CCDS:CCDS22821.1 GeneID:71946 MGI:1919196
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : endonuclease domain containing 1 protein_id : NP_082289.1

name	EG547035 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259828 GeneID:547035 MGI:3644125
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981441.2

name	Jmjd2d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116174756 CCDS:CCDS22822.1 GeneID:244694 MGI:3606484
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : jumonji domain containing 2D protein_id : NP_775609.2

name	0610040D20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963537 CCDS:CCDS22823.1 GeneID:66070 MGI:1913320
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : nucleoporin; mouse embryonic development factor 1 product : embryonic development factor 1 protein_id : NP_075642.1

name	Amotl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487107 GeneID:75723 MGI:1922973
definition	GO_component : GO:0005923 - tight junction [Evidence ISS] [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : angiomotin-like 1 protein_id : NP_001074864.1

name	EG665374 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385992 GeneID:665374 MGI:3644538
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981557.1

name	Piwil4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138556 CCDS:CCDS22824.1 GeneID:330890 MGI:3041167
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 product : piwi-like 4 protein_id : NP_808573.2

name	Fut4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753920 CCDS:CCDS22825.1 GeneID:14345 MGI:95594
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008417 - fucosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 note : stage-specific embryonic antigen 1; alpha (1,3) fucosyltransferase; galactoside 3-L-fucosyltransferase; 3-fucosyl-N-acetyl-lactosamine; alpha (1,3) fucosyltransferase, myeloid specific; alpha 1,3-fucosyltransferase; 3-fucosyl-N-acetyl-lactosamine epitope product : fucosyltransferase 4 protein_id : NP_034372.1

name	1700012B09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312964 GeneID:69325 MGI:1916575
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC69325 protein_id : NP_083582.1

name	Ankrd49 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22165398 CCDS:CCDS22826.1 GeneID:56503 MGI:1930842
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] codon_start : 1 note : fetal globin inducing factor product : globin inducing factor, fetal protein_id : NP_062657.2

name	Mre11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055282 CCDS:CCDS22827.1 GeneID:17535 MGI:1100512
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004519 - endonuclease activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA] GO_process : GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006302 - double-strand break repair [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : meiotic recombination 11 homolog A protein_id : NP_061206.1

name	LOC100040259 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259836 GeneID:100040259
definition	codon_start : 1 product : similar to macrophage migration inhibitory factor protein_id : XP_001474251.1

name	Gpr83 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753988 CCDS:CCDS22829.1 GeneID:14608 MGI:95712
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : glucocorticoid induced receptor; glucocorticoid-induced receptor product : G protein-coupled receptor 83 protein_id : NP_034417.1

name	Folr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28827784 CCDS:CCDS22830.1 GeneID:64931 MGI:1929185
definition	GO_component : GO:0005624 - membrane fraction [Evidence TAS] GO_function : GO:0005542 - folic acid binding [Evidence TAS]; GO:0008517 - folic acid transporter activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : folate receptor 4 (delta) isoform 2 protein_id : NP_789777.1

name	Folr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12584982 CCDS:CCDS22831.1 GeneID:64931 MGI:1929185
definition	GO_component : GO:0005624 - membrane fraction [Evidence TAS] GO_function : GO:0005542 - folic acid binding [Evidence TAS]; GO:0008517 - folic acid transporter activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : folate receptor 4 (delta) isoform 1 protein_id : NP_075026.1

name	Panx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86262134 CCDS:CCDS22832.1 GeneID:55991 MGI:1860055
definition	GO_component : GO:0005921 - gap junction [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : pannexin 1 protein_id : NP_062355.2

name	Hephl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259830 GeneID:244698 MGI:2685355
definition	codon_start : 1 product : hypothetical protein protein_id : XP_146812.7

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 5 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 4 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 3 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 2 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 1 pseudo : _no_value

name	LOC100039758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039758
definition	number : 1 pseudo : _no_value

name	LOC100039758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039758
definition	number : 2 pseudo : _no_value

name	LOC100039758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039758
definition	number : 3 pseudo : _no_value

name	LOC665329 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665329
definition	number : 1 pseudo : _no_value

name	LOC665329 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665329
definition	number : 2 pseudo : _no_value

name	LOC665329 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665329
definition	number : 3 pseudo : _no_value

name	LOC665351 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665351
definition	number : 4 pseudo : _no_value

name	LOC665351 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665351
definition	number : 3 pseudo : _no_value

name	LOC665351 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665351
definition	number : 2 pseudo : _no_value

name	LOC665351 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665351
definition	number : 1 pseudo : _no_value

clone name	MSMg01-199O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318P16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-359J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-408G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301K08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-325I12.b	B6Ng01-325I12.g
ACC	GA113566	GA113567
length	230	1,088
definition	B6Ng01-325I12.b	B6Ng01-325I12.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(13,834,557 - 13,834,786)	(13,954,347 - 13,955,437)
sequence	tcttccaggtagttcagctcacctctgtctctttcaagtttattttttaa attatgtgtgtgtgggggggtgtgcttttatgtatgtatgtatgtgttgt atgttgtgtttctatataagccagaagagggtgttagattccttggtgct ggacttatagttagttctgagcctccgacataggtattgggaaatgaact tgggtcccctgcaaaagcagctctcattat	gaattcccataagctgaaagaccagtaagtctggtgtgtgctccaagaac aagtgaccctgcctcaaatagggtggatgaagaggaccagcaccagcatc ttccacatgtgtgccttagcatgtactcatacacattcacatacatgacc atacatgcaccttgcacatacacaggaagtggggctgagatggagagtga gagaattcttttaaaaagagacttgttcttcttaatttggccagaataga agaggagacagacttacacaactatgtcctcagagagtcgtgggcttctg acatcatacagagggtgtctatcaggatgtgcgtctttgttagagcacaa gagaggacaaagcacctccaaactgagttttacacgcagacagcagccgc atatgctcaactacaactcttaatgtagactaggtctccctcagctccaa cagttagctgcgcatctggacggctcgggagcagtaatgaaatcaagatg cttctctattctctagaagatactgttcctgcatctgtggccccgaggct ctgctttgctgttagagttgaacgaatgtaaataactcaaaacatgttcc aatagtgtgttcctcatttacaacttattctatgcaaatgtaggctgaga aagggttggctatagcctaggacaaacggcccaagtccatcctgaccaaa ttccccagacacttggctagctcatgggtggcagagtttggctaaactat atcgacacaaccctcattttgtttgcctgagccatcattgaataaagact attatgcaatctacatgtaaagacagccactggcagggtatgtgtccccg agtatgtgtgcacatggcctcaactagaccatcttaggaagggggtggcc tcagagcccagaggtcccgagaagaggactggacacccagaggagaaact ttcatcagaagcctgtgtttctggaaggttttcctagaggagaattgagc acctcacaacaggattgaagacatgccaccagttccccgacttcctcttc cagttcacttctactctttctagagaaacaggtacctg
quality values	Open. Hide. 62 62 62 62 62 27 22 62 62 62 62 59 59 62 49 49 59 59 62 59 59 62 62 62 62 62 62 54 62 62 62 62 62 62 49 43 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 54 62 62 62 62 62 56 49 42 62 62 62 54 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 56 62 59 59 59 59 43 49 46 34 40 40 33 34 34 30 39 34 43 16 43 38 18 34 30 26 13 45 35 27 35 13 45 36 35 34 16 23 12 10 23 29 35 34 27 27 35 46 27 13 28 18 26 23 23 46 49 40 49 30 34 36 18 18 33 27 18 22 14 14 27 23 30 34 41 41 39 34 30 24 49 32 17 18 23 18 25 13 12 21 17 26 16 23 33 23 27 33 26 22 20 30 11 11 18 10 16 12 23 13 18 24 21 23 10 10 23 30 23 18 28 11 10 16 17 23 16 24 31 26 8 16 10	Open. Hide. 49 59 51 59 62 62 49 23 18 24 18 18 13 23 32 32 54 59 56 62 59 59 59 54 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 59 30 34 32 31 31 28 42 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 56 62 59 49 49 42 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 54 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 52 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 54 52 58 58 58 54 37 39 58 58 58 58 58 58 58 58 49 49 58 58 58 58 49 54 58 54 58 52 58 58 58 58 58 58 52 58 54 52 58 52 46 58 58 54 54 58 54 58 54 52 58 58 58 58 54 58 58 58 54 54 39 39 58 52 54 54 58 58 54 58 35 51 51 58 53 53 53 42 58 58 42 50 37 58 51 58 49 52 42 58 52 41 51 58 54 49 42 54 51 47 58 37 52 49 51 38 54 58 51 29 58 58 37 43 58 49 46 58 58 51 46 50 50 50 40 50 58 58 50 50 14 41 42 40 39 58 51 50 37 58 32 58 51 46 50 53 58 41 52 40 53 31 52 39 46 35 25 29 21 58 50 39 47 40 58 58 40 32 39 53 50 39 50 50 51 49 43 40 31 42 42 53 53 37 49 37 54 54 54 41 54 39 33 40 19 54 10 50 54 47 54 49 40 52 41 49 29 39 52 42 52 53 49 54 32 49 35 29 47 41 27 15 54 42 49 31 33 23 54 54 40 53 34 54 41 34 16 23 30 37 53 18 53 53 39 40 40 25 20 28 37 42 30 32 35 53 33 40 40 32 31 32 29 53 34 32 32 18 8 34 20 39 34 35 34 29 40 39 30 28 49 34 32 28 26 19 31 29 46 24 31 29 32 29 29 14 7 45 12 6 27 29 30 31 37 30 30 32 27 32 14 32 10 31 32 34 43 29 30 21 35 27 23 32 16 30 43 32 17 31 25 30 25 10 32 36 43 30 32 16 15 22 36 26 16 6 7 28 18 33 18 31 46 41 46 32 18 31 38 10 25 26 30 28 18 39 11 31 46 27 31 11 28 12 21 21 32 30 33 24 28 15 33 27 17 39 14 21 16 9 30 24 27 10 13 17 29 32 29 18 6 16 11 16 38 7 22 36 25 14 7 36 26 32 10 11 12 17 12 29 17 20 31 19 21 20 13 21 15 44 9 36 14 18 19 15 4 7 19 6 43 31 24 21 15 12 18 10 21 24 19 11 9 10 33 21 30 27 20 14 7 8 23 13 20 22 8 5 6 7 7 7 11 9 13 7 9 9 7 6 9 17 8 9 11 10 3 9 13 18 20 13 24 10 9 27 29 25 15 4 19 20 32 19 27 10 11 9 10 28 10 13 21 11 12 13 7 4 8 21 13 19 4 13 4 4 5 9 32 19 7 11 27 5 18 11 27 33 12 11 6 17 18 9 16 7 17 5 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_13834557_13834786
seq2: B6Ng01-325I12.b_48_277

seq1  TCTTCCAGGTAGTTCAGCTCACCTCTGTCTCTTTCAAGTTTATTTTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGGTAGTTCAGCTCACCTCTGTCTCTTTCAAGTTTATTTTTTAA  50

seq1  ATTATGTGTGTGTGGGGGGGTGTGCTTTTATGTATGTATGTATGTGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGTGTGTGGGGGGGTGTGCTTTTATGTATGTATGTATGTGTTGT  100

seq1  ATGTTGTGTTTCTATAGAAGCCAGAAGAGGGTGTTAGATTCCTTGGTGCT  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGTTGTGTTTCTATATAAGCCAGAAGAGGGTGTTAGATTCCTTGGTGCT  150

seq1  GGACTTATAGTTAGTTCTGAGCCTCCGACATAGGTATTGGGAAATGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTATAGTTAGTTCTGAGCCTCCGACATAGGTATTGGGAAATGAACT  200

seq1  TGGGTCCCCTGCAAAAGCAGCACTCATTAT  230
      ||||||||||||||||||||| ||||||||
seq2  TGGGTCCCCTGCAAAAGCAGCTCTCATTAT  230

seq1: chr9_13954347_13955437
seq2: B6Ng01-325I12.g_67_1154 (reverse)

seq1  CAGGTACCCTGTTCTCTTAGAAGAGTTAGGAAGTGACTTGGAAGAGGAAG  50
      ||||||||   ||||||   ||||||   |||||||  ||||||||||||
seq2  CAGGTACCTGTTTCTCTAGAAAGAGT--AGAAGTGAACTGGAAGAGGAAG  48

seq1  TCGGGGGACTGGTGGGCCATGTC-TCATTCCTG-TGTGAGGTGCCTCAAT  98
      |||||| ||||||||  |||||| ||| ||||| ||||||||| ||||||
seq2  TCGGGGAACTGGTGG--CATGTCTTCAATCCTGTTGTGAGGTG-CTCAAT  95

seq1  TCTCCCTCTAGGAAACCCTTCCAGGAACACAGGCTTTCTGATG-AAGTTT  147
      ||| ||||||||||| |||||||| ||||||||| |||||||| ||||||
seq2  TCT-CCTCTAGGAAAACCTTCCAGAAACACAGGC-TTCTGATGAAAGTTT  143

seq1  CTCCTCTGGGTGTCCAGTCCTCTTCTCGGGACCTCTGGGCTCTGAGGCCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGGGTGTCCAGTCCTCTTCTCGGGACCTCTGGGCTCTGAGGCCA  193

seq1  CCCCCTTCCT-AGATGGTCTAGTTGAGGCCATGTGCACACATACTCGGGG  246
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTCCTAAGATGGTCTAGTTGAGGCCATGTGCACACATACTCGGGG  243

seq1  ACACATACCCTGCCAGTGGCTGTCTTTACATGTAGATTGCATAATAGTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACCCTGCCAGTGGCTGTCTTTACATGTAGATTGCATAATAGTCT  293

seq1  TTATTCAATGATGGCTCAGGCAAACAAAATGAGGGTTGTGTCGATATAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAATGATGGCTCAGGCAAACAAAATGAGGGTTGTGTCGATATAGT  343

seq1  TTAGCCAAACTCTGCCACCCATGAGCTAGCCAAGTGTCTGGGGAATTTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAAACTCTGCCACCCATGAGCTAGCCAAGTGTCTGGGGAATTTGG  393

seq1  TCAGGATGGACTTGGGCCGTTTGTCCTAGGCTATAGCCAACCCTTTCTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGGACTTGGGCCGTTTGTCCTAGGCTATAGCCAACCCTTTCTCA  443

seq1  GCCTACATTTGCATAGAATAAGTTGTAAATGAGGAACACACTATTGGAAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACATTTGCATAGAATAAGTTGTAAATGAGGAACACACTATTGGAAC  493

seq1  ATGTTTTGAGTTATTTACATTCGTTCAACTCTAACAGCAAAGCAGAGCCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTGAGTTATTTACATTCGTTCAACTCTAACAGCAAAGCAGAGCCT  543

seq1  CGGGGCCACAGATGCAGGAACAGTATCTTCTAGAGAATAGAGAAGCATCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCCACAGATGCAGGAACAGTATCTTCTAGAGAATAGAGAAGCATCT  593

seq1  TGATTTCATTACTGCTCCCGAGCCGTCCAGATGCGCAGCTAACTGTTGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATTACTGCTCCCGAGCCGTCCAGATGCGCAGCTAACTGTTGGA  643

seq1  GCTGAGGGAGACCTAGTCTACATTAAGAGTTGTAGTTGAGCATATGCGGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGGAGACCTAGTCTACATTAAGAGTTGTAGTTGAGCATATGCGGC  693

seq1  TGCTGTCTGCGTGTAAAACTCAGTTTGGAGGTGCTTTGTCCTCTCTTGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTGCGTGTAAAACTCAGTTTGGAGGTGCTTTGTCCTCTCTTGTG  743

seq1  CTCTAACAAAGACGCACATCCTGATAGACACCCTCTGTATGATGTCAGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACAAAGACGCACATCCTGATAGACACCCTCTGTATGATGTCAGAA  793

seq1  GCCCACGACTCTCTGAGGACATAGTTGTGTAAGTCTGTCTCCTCTTCTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACGACTCTCTGAGGACATAGTTGTGTAAGTCTGTCTCCTCTTCTAT  843

seq1  TCTGGCCAAATTAAGAAGAACAAGTCTCTTTTTAAAAGAATTCTCTCACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCAAATTAAGAAGAACAAGTCTCTTTTTAAAAGAATTCTCTCACT  893

seq1  CTCCATCTCAGCCCCACTTCCTGTGTATGTGCAAGGTGCATGTATGGTCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTCAGCCCCACTTCCTGTGTATGTGCAAGGTGCATGTATGGTCA  943

seq1  TGTATGTGAATGTGTATGAGTACATGCTAAGGCACACATGTGGAAGATGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGAATGTGTATGAGTACATGCTAAGGCACACATGTGGAAGATGC  993

seq1  TGGTGCTGGTCCTCTTCATCCACCCTATTTGAGGCAGGGTCACTTGTTCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTGGTCCTCTTCATCCACCCTATTTGAGGCAGGGTCACTTGTTCT  1043

seq1  TGGAGCACACACCAGACTTACTGGTCTTTCAGCTTATGGGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCACACACCAGACTTACTGGTCTTTCAGCTTATGGGAATTC  1088

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information