BAC Information

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BAC

Clone NameB6Ng01-325P22
Chromosome9 (Build37)
Map Location 109,529,161 - 109,530,321
singlet/doubletsinglet
Overlap genenone
Upstream geneArih2, ENSMUSG00000074075, Slc25a20, Prkar2a, Ihpk2, Nckipsd, Celsr3, Slc26a6, LOC100038959, Tmem89, Uqcrc1, Col7a1, Pfkfb4, Scotin, Trex1, 6620401K05Rik, Ccdc72, Ccdc51, EG665413, Plxnb1, E330009P21Rik, Fbxw13, Fbxw12, Fbxw14, LOC668758, EG382156, Fbxw16, Fbxw19, LOC635668, Fbxw15, EG382106
Downstream geneE330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1, Rn4.5s-ps2, Cspg5, Tmem103, Scap, Ptpn23, Ngp, Klhl18, Kif9, Setd2, Nradd, Nbeal2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325P22.bB6Ng01-325P22.g
ACCGA113914GA113915
length1,1921,174
definitionB6Ng01-325P22.b B6Ng01-325P22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacagtgacaatcgccaagcgaagctcattcatcttgccatcaaa
atttgcagtccaatttcttaataggaatttcttaacagaaagcatcatga
cgaagaggcatcggcctgggaaacaccgacagtatcccccatctgggttc
tgcacccatcagggtcagacacatgctcatcaccagcaaaatcagcttct
tcattttgacagcgttgcactagcctctccggaacccacactggctctgc
gcaattctgtggaaacatgcaaacaggacctcttgcccaggccaacatgg
gatccggaccattccatgatcctgtaagcacatccttccatttagcatac
cccggtttactggggctggtattagcatgtcgttcagcagcagagcaacc
ttccttatccaattgtaaaaaaattaaggtaaaaagagctaaggggagtc
ttatctttggggtatggccatagcctattccccctttttgttttattaat
aattcttttaaggttctatgtgcttgttcaatgattccttggccttgagg
attatatggcaggccatgtttaacttgtacttccatctgttgacaaaaag
acaccaaggttttggcattatctgttttaagttgttggggtttaccccaa
gctgcccaggcctccaaacaatgctgtataacatgggaggccttttcccc
tgccatgggagatgcataaactattcctgaacatgtatcaatggatacat
gaacatatttcaatttgccagattctgaaaaatgtgtcacatccatctgc
cacacctgtagagggagcaatcctctaggattcactccataagaaggcgg
gtgttgaaactcaaggcaacttccacaggtagtgactacatcctgagctt
gtgctctagagattccaaattttctctgcagagttttaacatgaatttag
aatgaaatgtgaggctactccataggggatgctaaaatatgaacttcata
caagtaacattatcacatatcatttccctactaaagggtctggaagccca
ctatgggcacgacatgtccaatatatatggtgcgtcttcccacagcactt
ctgtatgtaagccagcctggatggtactacaggctattggccagcacttg
agcataaactcaatttgtacctacctattgtggtgaatcctg
gaattctaggccagcctagattattggatgatatcctctgtcattcaatc
acacagatacagacacagacacagacacagacacagacacagacacagac
acagacacagaaacacacacacacacacacacacacacatatacacacgc
attcaagtacatgaacaggcacagcttaatcaattacacactgtaaaatt
aatcagatcttcatcatgaatggataatacccattgtttagttttctagg
gtatcaatgcctcatgtctgttataaggagttacaacagctctgcatttg
aacatctaaatcagtcactcagagaaagaagccagggtcagcctctggct
caccaaacacaaaagtcaaagccaggcattgtggcacacatctttcatcc
catccatttgggaggcagagacagacagatctccaagtttgaggcctgga
ttatatatcaagatccagactggtcagtcaggggtagagagtgaaaacct
gtctcaaaatcaaataaagaagagaagaaagaaaaagaaatgaaagagag
agagagagagagagagagagtaagaaatgaagaaagagaaagaaagaaaa
gaaaagaaaagaaaaagaaaggaaagaaaggtgaaagctgagaaagtgaa
gcacaacgaggtctctggctcctttcagggcctgtactgtggcctgagtc
ccctctgcaggctgctttggttttgctggttgcagtcgcttcacgttcta
acatccaattatgtagtaacaaatccaatggtggggtctgcagtcctcaa
aattattttcaatctgaatcagtagagagcataatttaaactgtgtctca
tataaccattttgtatgtgtgtatgtctaagtatgtatatgtgcatatgt
ccatggtgtatgtctgagtgtactctattgttgtgctgggttccttgggt
tattgtcttaaaggatagagtagcacaggttacaaaggtccaggacctaa
gctctacctgtggatgacgtctagaatgaaaattccattctgaatttcta
gttagtaatattacttcagcatggagtaaatcaggcattgtaacacctta
cctctcttttttattggaaacaaggttcaatctttaggccttagggctgt
tccaggaactatttcagtacatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_109529161_109530321
seq2: B6Ng01-325P22.g_67_1240 (reverse)

seq1  ACATGTACTGAACATGATTCCTGG-ACAG-CCTAAGG-CTAAAGAATGAG  47
      |||||||||||| ||  ||||||| |||| ||||||| ||||||| ||| 
seq2  ACATGTACTGAA-ATAGTTCCTGGAACAGCCCTAAGGCCTAAAGATTGA-  48

seq1  ACTTTGTTTC--ATAAAA---AGAGTAAAAGTGT---CATG-CTGATTTT  88
      || |||||||  ||||||   ||||  || ||||    ||| |||| |||
seq2  ACCTTGTTTCCAATAAAAAAGAGAGGTAAGGTGTTACAATGCCTGA-TTT  97

seq1  ACT-CATGCTG-AGT-ATATTACTAACTAGAAA-TCAGAAT-GAATTTTC  133
      ||| ||||||| ||| ||||||||||||||||| ||||||| ||||||||
seq2  ACTCCATGCTGAAGTAATATTACTAACTAGAAATTCAGAATGGAATTTTC  147

seq1  ATTCTAGACGGTCATCCACAGGTAGAGCTTAGGTCCTGGACCTTTGGTAA  183
      ||||||||| ||||||||||||||||||||||||||||||||||||  | 
seq2  ATTCTAGAC-GTCATCCACAGGTAGAGCTTAGGTCCTGGACCTTTGTAAC  196

seq1  CTGTGCTACTCTATCCTTTAAGACAATAACCCAAGGAACCCAGCACAACA  233
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTACTCTATCCTTTAAGACAATAACCCAAGGAACCCAGCACAACA  246

seq1  ATAGAGTACACTCAGACATACACCATGGACATATGCACATATACATACTT  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTACACTCAGACATACACCATGGACATATGCACATATACATACTT  296

seq1  AGACATACACACATACAAAATGGTTATATGAGACACAGTTTAAATTATGC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATACACACATACAAAATGGTTATATGAGACACAGTTTAAATTATGC  346

seq1  TCTCTACTGATTCAGATTGAAAATAATTTTGAGGACTGCAGACCCCACCA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACTGATTCAGATTGAAAATAATTTTGAGGACTGCAGACCCCACCA  396

seq1  TTGGATTTGTTACTACATAATTGGATGTTAGAACGTGAAGCGACTGCAAC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTTGTTACTACATAATTGGATGTTAGAACGTGAAGCGACTGCAAC  446

seq1  CAGCAAAACCAAAGCAGCCTGCAGAGGGGACTCAGGCCACAGTACAGGCC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAACCAAAGCAGCCTGCAGAGGGGACTCAGGCCACAGTACAGGCC  496

seq1  CTGAAAGGAGCCAGAGACCTCGTTGTGCTTCACTTTCTCAGCTTTCACCT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGGAGCCAGAGACCTCGTTGTGCTTCACTTTCTCAGCTTTCACCT  546

seq1  TTCTTTCCTTTCTTTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTTTCTTC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCTTTCTTTTTCTTTTCTTTTCTTTTCTTTCTTTCTCTTTCTTC  596

seq1  ATTTCTTACTCTCTCTCTCTCTCTCTCTCTCTCTTTCATTTCTTTTTCTT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTACTCTCTCTCTCTCTCTCTCTCTCTCTTTCATTTCTTTTTCTT  646

seq1  TCTTCTCTTCTTTATTTGATTTTGAGACAGGTTTTCACTCTCTACCCCTG  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTCTTTATTTGATTTTGAGACAGGTTTTCACTCTCTACCCCTG  696

seq1  ACTGACCAGTCTGGATCTTGATATATAATCCAGGCCTCAAACTTGGAGAT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCAGTCTGGATCTTGATATATAATCCAGGCCTCAAACTTGGAGAT  746

seq1  CTGTCTGTCTCTGCCTCCCAAATGGATGGGATGAAAGATGTGTGCCACAA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTCTGCCTCCCAAATGGATGGGATGAAAGATGTGTGCCACAA  796

seq1  TGCCTGGCTTTGACTTTTGTGTTTGGTGAGCCAGAGGCTGACCCTGGCTT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCTTTGACTTTTGTGTTTGGTGAGCCAGAGGCTGACCCTGGCTT  846

seq1  CTTTCTCTGAGTGACTGATTTAGATGTTCAAATGCAGAGCTGTTGTAACT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTGAGTGACTGATTTAGATGTTCAAATGCAGAGCTGTTGTAACT  896

seq1  CCTTATAACAGACATGAGGCATTGATACCCTAGAAAACTAAACAATGGGT  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATAACAGACATGAGGCATTGATACCCTAGAAAACTAAACAATGGGT  946

seq1  ATTATCCATTCATGATGAAGATCTGATTAATTTTACAGTGTGTAATTGAT  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCATTCATGATGAAGATCTGATTAATTTTACAGTGTGTAATTGAT  996

seq1  TAAGCTGTGCCTGTTCATGTACTTGAATGCGTGTGTATATGTGTGTGTGT  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGTGCCTGTTCATGTACTTGAATGCGTGTGTATATGTGTGTGTGT  1046

seq1  GTGTGTGTGTGTGTGTTTCTGTGTCTGTGTCTGTGTCTGTGTCTGTGTCT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTTTCTGTGTCTGTGTCTGTGTCTGTGTCTGTGTCT  1096

seq1  GTGTCTGTGTCTGTGTCTGTATCTGTGTGATTGAATGACAGAGGATATCA  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTGTCTGTGTCTGTATCTGTGTGATTGAATGACAGAGGATATCA  1146

seq1  TCCAATAATCTAGGCTGGCCTAGAATTC  1161
      ||||||||||||||||||||||||||||
seq2  TCCAATAATCTAGGCTGGCCTAGAATTC  1174