BAC Information

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BAC

Clone NameB6Ng01-326G18
Chromosome9 (Build37)
Map Location 72,001,761 - 72,002,344
singlet/doubletsinglet
Overlap genenone
Upstream geneAqp9, 1700020I22Rik, LOC100041660, Aldh1a2, Grinl1a, AA407270, LOC547043, LOC100040537, Cgnl1, Tcf12, EG666001, LOC665959
Downstream geneEG665964, LOC665970, Suhw4, LOC100041760, Mns1, LOC666007, Tex9, 4930509E16Rik, Rfxdc2, Nedd4, EG639396, Prtg, LOC100040694, Pygo1, Dyx1c1, EG546143, Ccpg1, LOC100041896, Pigb, Rab27a, 2410004A20Rik, BC003885
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326G18.bB6Ng01-326G18.g
ACCGA114235GA114236
length5781,165
definitionB6Ng01-326G18.b B6Ng01-326G18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caggacagccaggactatatagagaaaccctgcctcaaaaaacaaaacaa
aacaaaaacaaaaaacaaaaagaaagaaagaaaaaaagaaaaagattgct
ttgtactattcacgtttgcagcctcattttatagttccatgtggtctgaa
tgcaaagcattatgcagtgtaggacttccttaccatcatcatcatcatca
aaacaacaacaacaaacaaacaaacaaacaaacaaacaaaaccaaagagc
cccgggaggaggtgatggaccacaatgctggcttacctctaaggtcggcc
caaggctgtatcattagcttttgtttcaacagagctctggactcagctgc
tcacagtcagtaatccgaggaagcaagaaggaggaagggttaagagcaag
atctatccctcaaaggcacaaggccctctcccatgacctgtgaccaggcc
cacctcttactagcctgttcagctatgaactcatcagtaggttaagtcac
tgatgaagttagtatcctcaggatccaggcaacctttatagtgcctggag
gaggggaaagggagaggggaaaggggga
gaattctaaaggagtaggtaaagagggaggtgttgtatccctacttggtt
cttgattgtgtcaataaaaaggggggaagccaattgctggacgaaagaaa
aatggtgggacttgcaggtcccagaagagaagggacacagggagagagga
atttggaccaggatttggatggaaagggaagctgaagtcatgtagatctt
gggacacttagaattattgtagcctctgctgccagcaaggactgagaagg
ttgtggggagctggctgatagaattggggcaggaaattctttacccagct
gttgagttatctggctagctttaaaataataaaactgtctaatgttttct
atccatgtagctaaggtggacaggagaagaaagagggcagccagggcagt
tgctggtggaagttagcctgagagggttgggggagcaattgcagctcctg
ggaaaaatgaccagctggtcattggcagagctgaatgagactggtggtgg
cagatcacagagctaaacccagagaggctggagtgcaggctgtgacacca
ggcaaggttggtaacaggtttttaaaattacacgcaacaagtaggctata
aggctgaaaaagtataacctaaaaacaaaattctaggcctttaggcccag
gcttaagaatgtgacctttgtgactcaatgctccaaggcatgctaatcat
aaaacagatagcaacattcctccacccacccacttcctgggttcaggaag
cgttcattcaaagaaagttgccttgactcttgctggaacccgctgtgcaa
aggtgctattgttagaggctcctagaaaactgtcttgactttccaccacc
tcatgactcttaactggtatttttggtattttccaacaacgccctcccca
cctccttgagttgtggtttcttcctttaatacccccttacccaactactc
ggggtgccagggtcctctacccctgtgtggtatatgactgtgggcccaaa
gcgctcttgaataaaagtctctgcagtttgcagcgagaccgtttctcgtg
agtgatttgggtgtcgccttctcctgaattcagattgtggcgaggtcctc
atgttgtggtctcaagcaagtaagaattggaatctctagaaaagctagca
ccacaatatgaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_72001761_72002344
seq2: B6Ng01-326G18.b_49_632

seq1  GAATTCCAGGACAGCCAGGACTATATAGAGAAACCCTGCCTCAAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGACTATATAGAGAAACCCTGCCTCAAAAAACA  50

seq1  AAACAAAACAAAAACAAAAAACAAAAAGAAAGAAAGAAAAAAAGAAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAAACAAAAAACAAAAAGAAAGAAAGAAAAAAAGAAAAAG  100

seq1  ATTGCTTTGTACTATTCACGTTTGCAGCCTCATTTTATAGTTCCATGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTGTACTATTCACGTTTGCAGCCTCATTTTATAGTTCCATGTGG  150

seq1  TCTGAATGCAAAGCATTATGCAGTGTAGGACTTCCTTACCATCATCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGCAAAGCATTATGCAGTGTAGGACTTCCTTACCATCATCATCA  200

seq1  TCATCAAAACAACAACAACAAACAAACAAACAAACAAACAAACAAAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAAACAACAACAACAAACAAACAAACAAACAAACAAACAAAACCA  250

seq1  AAGAGCCCCGGGAGGAGGTGATGGACCACAATGCTGGCTTACCTCTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCCCGGGAGGAGGTGATGGACCACAATGCTGGCTTACCTCTAAGG  300

seq1  TCGGCCCAAGGCTGTATCATTAGCTTTTGTTTCAACAGAGCTCTGGACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCCAAGGCTGTATCATTAGCTTTTGTTTCAACAGAGCTCTGGACTC  350

seq1  AGCTGCTCACAGTCAGTAATCCGAGGAAGCAAGAAGGAGGAAGGGTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTCACAGTCAGTAATCCGAGGAAGCAAGAAGGAGGAAGGGTTAAG  400

seq1  AGCAAGATCTATCCCTCAAAGGCACAAGGCCCTCTCCCATGACCTGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATCTATCCCTCAAAGGCACAAGGCCCTCTCCCATGACCTGTGAC  450

seq1  CAGGCCCACCTCTTACTAGCCTGTTCAGCTATGAACTCATCAGTAGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCACCTCTTACTAGCCTGTTCAGCTATGAACTCATCAGTAGGTTA  500

seq1  AGTCACTGATGAAGTTAGTATCCTCAGGATCCAGGCAACCTTTATAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGATGAAGTTAGTATCCTCAGGATCCAGGCAACCTTTATAGTGC  550

seq1  CTGGAGGAGGGGAAAGGGAGAGGGGAAAGGGGGA  584
      ||||||||||||||||||||||||||||||||||
seq2  CTGGAGGAGGGGAAAGGGAGAGGGGAAAGGGGGA  584