BAC Information

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BAC

Clone NameB6Ng01-326H08
Chromosome9 (Build37)
Map Location 26,515,077 - 26,515,835
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneB3gat1, BC038479, Glb1l3, Gm1110, LOC330907, Acad8, Thyn1, Vps26b, Ncapd3, Jam3, Igsf9b, Spata19, LOC666440, LOC100041202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326H08.bB6Ng01-326H08.g
ACCGA114263GA114264
length1,2011,162
definitionB6Ng01-326H08.b B6Ng01-326H08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattcttcatctgcttcagagctactaagagctggcttcctgagctca
tctagtgacgagtatctcctagagacctccgctaatcgatcttttttctt
ttcttttttcttttccttccttctaatctctccccaggtattcttacctg
acctaaacttttcctcgggttcaagacccttggaaaggcctgtatactta
ttttgtgtaccatattttctctttgctcctactctctctccccgctttac
ttctgatagattgccctgaatttcatccagaatccgccctgccttaacca
cttgataacatgtgaaaaggaacaaaagggcttctaacattagaaaaaat
tcaaggccaaacattttccactttacttctgatagactgtcttgaatttc
cttagaaagttcaagatcagacttacctcgtaaagctgtactcactggta
ctctcgttccccagctgaaaagttctgaattcatacagttgaatccttct
taacagtctgctttacgggaacctttattaccgcgacccgcagttctggt
tctggaatgagggatctttcttgcgccagtcccgagttttttctcgtccc
ggaattcggcaccaattgttattaaacgcgttctcacgaccggccaggaa
agacgcaacaaaccagaatcttctgcggcaaagctttattgcttacatct
tcaggagccagagtgcaagaagcaagagcgagagaaaacgaaaacccgtc
ccttttttaggagagttatatttcgcctaggacgtgtcactccctgattg
gctgcagcccatcggccgagttgacgtcacggggaaaggcagagcacatg
gagtggagaaccaccctcggcatatgcgcagtttatttgtttaccactta
gaacacagctgtcagcgccatctttgtaacggcgaatgtgggcgcggctc
ccacaactgaataggctaaggctgtagtacatgagagaagcagagagcag
cctctctactattccaccaaggcagaggtcagcctgccctgtctgacctg
tctgccttgtgttggatgcccagggctagtggcacaccttggaaagtctg
cacttcttgcagtcaggcatcttgcctcttggtgaaactaaaggagctta
cactcttgcaatgattgcctggaatttgtctccataacatggaacggaag
c

gaattccagttttatgtttgatgccaaattctttacaaaatgaagtaaaa
tttttgctagaataggatggcccgttatttgtcttaataagtttaggcaa
atcatggcattaaagacttgtaggcaatgatcaattacatttttggaggc
ttctccagtatgcagagaagcaaaaagaaatcctgaacaagtatcaatac
aaacatgtatatattttaattttccaaattctgcataatgagttacatcc
atttgccaaatatgattaggcataagacctcgtggattaactcctaaatg
tggcactggagataatgtaatacatttaggacattgttttacaatcattc
ttgccctgctccttagtgatcttatgtcagagccttaaggtatggctaga
gagatgaaattttcatgatcacgctcggccaaagcaacaggatctgaaat
tgaggcttctggtattagagctctgtcgatgctatcattgcctccagcta
aaggtccaggaagaccagaaggagatcgtatgtggccaatatagaacggg
tgtttttgagcaagaatgatgttttgcaattgtgaaaacagagatcctgc
tggcgtattaaagttaaaccaataagggtaccgattgtgcaacatataaa
ctatcagtaaaaatattaaaagcctcatgcacagactgaaagacattcag
tatagctgttaattctgctaattgagctgagaggccaggagtctttatga
ttgcctgttgattatttataagaaatccagctcgccctttagaggagcca
tcagtaaacaccagaacaatatcctcatatacattcaaaaattttatcaa
cctatcttgagggtagtggctgtctatagttctgttaaaccctatttgag
caagcaaccaatctgtactgtgatgtttcagccaagtgtcttgacttacg
cttataagctgaacagtaatatcctggcttctttgccaaaatagtttagt
gcctgcttccttcaagaataatcatctgagctactgcttcataatatgac
aagaatattgcatttagagaatccccggaatgtatccacattagagagaa
ctttgcccataccatctgtaggcaatgcattctattaaaattaccagaat
gtaaaggcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_26515077_26515835
seq2: B6Ng01-326H08.b_505_1249

seq1  TTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGCTGAAAAGTTCTGAATTCATACAGTTGAATCCTTCTTAACAG  50

seq1  TCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTACGGGAACCTTTATTACCGCGACCCGCAGTTCTGGTTCTGGA  100

seq1  ATGAGGGATCTTTCTTGCGCCAGTCCCGAGTTTTTTCTCGTCCCGGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGATCTTTCTTGCGCCAGTCCCGAGTTTTTTCTCGTCCCGGAATT  150

seq1  CGGCACCAATTGTTATTAAACGCGTTCTCACGACCGGCCAGGAAAGACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACCAATTGTTATTAAACGCGTTCTCACGACCGGCCAGGAAAGACGC  200

seq1  AACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCAGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCAGGA  250

seq1  GCCAGAGTGCAAGAAGCAAGAGCGAGAGAAAACGAAAACCCGTCCCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTGCAAGAAGCAAGAGCGAGAGAAAACGAAAACCCGTCCCTTTT  300

seq1  TTAGGAGAGTTATATTTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGAGTTATATTTCGCCTAGGACGTGTCACTCCCTGATTGGCTGCA  350

seq1  GCCCATCGGCCGAGTTGACGTCACGGGG-AAGGCAGAGCACATGGAGTGG  399
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCCATCGGCCGAGTTGACGTCACGGGGAAAGGCAGAGCACATGGAGTGG  400

seq1  AGAACCACCCTCGGCATATGCGCAGTTTATTTGTTTACCACTTAGAACAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCACCCTCGGCATATGCGCAGTTTATTTGTTTACCACTTAGAACAC  450

seq1  AGCTGTCAGCGCCATC-TTGTAACGGCGAATGTGGGCGCGGCTCCCAACA  498
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  AGCTGTCAGCGCCATCTTTGTAACGGCGAATGTGGGCGCGGCTCCC-ACA  499

seq1  ACTGAATAGGCTAAGGCTGTAGTACATGAGAGAAGCAGAGAAGCAGCCTC  548
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  ACTGAATAGGCTAAGGCTGTAGTACATGAGAGAAGCAGAG-AGCAGCCT-  547

seq1  CTCTACTATTCCACCAAGGCAAGAAGGTTCAAGCCTGCCCTGTCCTGACC  598
      |||||||||||||||||||||   ||||   |||||||||||| ||||||
seq2  CTCTACTATTCCACCAAGGCA--GAGGT--CAGCCTGCCCTGT-CTGACC  592

seq1  TGTCCTGCCCTTGTGTTGGATGCCCCAGGGCTAAGTGCACA-CTTGGAAA  647
      ||| ||| |||||||||||||| ||||||||||   ||||| ||||||||
seq2  TGT-CTG-CCTTGTGTTGGATG-CCCAGGGCTAGTGGCACACCTTGGAAA  639

seq1  GTCTGCACTTCTTGCAGTCA-GCATCTTG-CTCTTGTGAAAACTAAAAGG  695
      |||||||||||||||||||| |||||||| ||||||   ||||| |||||
seq2  GTCTGCACTTCTTGCAGTCAGGCATCTTGCCTCTTGGTGAAACT-AAAGG  688

seq1  AGC-TACAACCTCTGCCAAAATGAATGGCTGG-ATTTGTTCCTCCCATAA  743
      ||| ||||  ||||  |  ||||| || |||| ||||||  || ||||||
seq2  AGCTTACA--CTCTTGC--AATGATTGCCTGGAATTTGT--CT-CCATAA  731

seq1  CATGGAGAAGGGAAGC  759
      ||||  ||| ||||||
seq2  CATG--GAACGGAAGC  745


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