BAC Information

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BAC

Clone NameB6Ng01-326M23
Chromosome9 (Build37)
Map Location 34,392,799 - 34,393,894
singlet/doubletsinglet
Overlap geneKirrel3
Upstream geneLOC100042343
Downstream geneSt3gal4, Dcps, Tirap, Foxred1, Srpr, C030004A17Rik, Rpusd4, EG434394, Cdon, Ddx25, Pus3, EG627480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326M23.bB6Ng01-326M23.g
ACCGA114528GA114529
length1,097494
definitionB6Ng01-326M23.b B6Ng01-326M23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactgaacccattttccttggtcatcggtgatgagcgagtctag
ggtttggaaaatgcagggaaggacagagggaagccattctagtgttccac
tacctgctgtcagatgaatgcaagcccccgtgtttgcacaccaaccatga
tctctctgactcaaaggacaggttctctctgtgcaatggagctgacctga
ggagtaacaaccctgctgcatcttttacaaaaaaccaaaagccaagtgac
aacttgcaggactcatttcctccacaccagctaactgaagagcactgctg
gtctggcaggagaccagacctcagagtaagtctttaagaagatgttgtac
ctgtgggggccccctggctcacctcactcccacattcttgactgtttatc
tcagttctgataggttaaactcaaccatgagacatccaagacttggggat
tgcttgtaaacaaaacggtatactcagctgttgtcaaacttcgaggcagc
tgcttccctaggcctaggctaaaacaaactctctattcattgcttttgtt
agatagcacctttaactacagctgcttctggaatctgtcctaggatttgt
ctggcctgacaaattacatgactcccaaaggcccatcagtgatccagctc
tgaggaaatcttctgctgcattgctgtatacagcttaaatggaaaagaaa
agcgagccctattataattccaggaactggaagctaatcagagcctcaca
tctgcctttcagctcctttctgcctctgtcaagtaggataggtgaccctt
tttgtaaatactgctgttatcagagattttgtgtttaatggttactgggt
catattttacaagtgcaaatgactttgaggccctccatttacttctaagt
aatcggcatgtctacaagtagagaaaggccataaagaagcaagcagctcc
tgttctggtcagcagctcctgatattcattattctccaagtctgagaggc
agtggcttccgaatcccacagtgggggtttatacttcattcttgtaagaa
gtgcggcacaggctctttggcttctgttttcagttgcttgatttttt
tcctacctgacaacagaagctgggcctgtgagtccactgggtgtctccat
tccagaatggcgagacccctgcatgcaggaaatgctgctgaataaatact
ctttgcttttgcatactatttgagcttgtcttgtcattctctggtgatct
tggaacttaacaatgggaaagtgggatagtctaagccaccaaacccagac
actattgcatatggcagcaagattttgctgaagggaccctggtatagctg
tcttgtgtgaggctaagccaggacttgacaaatacagaagtggatgctca
cagtcatctatagaatggaacacagggtccccaatggaggagctagagaa
agtacccaaggagctgaaggggtctgcaaccctaaaggtagaacaacaat
atgaactaaccagtaccctcagagctcatgtctctagctgcatatgtagc
agaagatggcctagttggccatcattgggaagagaggcccctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_34392799_34393894
seq2: B6Ng01-326M23.b_49_1145

seq1  GAATTCCACTGAACCCATTTTCCTTGGTCATCGGTGATGAGCGAGTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGAACCCATTTTCCTTGGTCATCGGTGATGAGCGAGTCTAG  50

seq1  GGTTTGGAAAATGCAGGGAAGGACAGAGGGAAGCCATTCTAGTGTTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGAAAATGCAGGGAAGGACAGAGGGAAGCCATTCTAGTGTTCCAC  100

seq1  TACCTGCTGTCAGATGAATGCAAGCCCCCGTGTTTGCACACCAACCATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTGTCAGATGAATGCAAGCCCCCGTGTTTGCACACCAACCATGA  150

seq1  TCTCTCTGACTCAAAGGACAGGTTCTCTCTGTGCAATGGAGCTGACCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGACTCAAAGGACAGGTTCTCTCTGTGCAATGGAGCTGACCTGA  200

seq1  GGAGTAACAACCCTGCTGCATCTTTTACAAAAAACCAAAAGCCAAGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAACAACCCTGCTGCATCTTTTACAAAAAACCAAAAGCCAAGTGAC  250

seq1  AACTTGCAGGACTCATTTCCTCCACACCAGCTAACTGAAGAGCACTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCAGGACTCATTTCCTCCACACCAGCTAACTGAAGAGCACTGCTG  300

seq1  GTCTGGCAGGAGACCAGACCTCAGAGTAAGTCTTTAAGAAGATGTTGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCAGGAGACCAGACCTCAGAGTAAGTCTTTAAGAAGATGTTGTAC  350

seq1  CTGTGGGGGCCCCCTGGCTCACCTCACTCCCACATTCTTGACTGTTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGGGCCCCCTGGCTCACCTCACTCCCACATTCTTGACTGTTTATC  400

seq1  TCAGTTCTGATAGGTTAAACTCAACCATGAGACATCCAAGACTTGGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTGATAGGTTAAACTCAACCATGAGACATCCAAGACTTGGGGAT  450

seq1  TGCTTGTAAACAAAACGGTATACTCAGCTGTTGTCAAACTTCGAGGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTAAACAAAACGGTATACTCAGCTGTTGTCAAACTTCGAGGCAGC  500

seq1  TGCTTCCCTAGGCCTAGGCTAAAACAAACTCTCTATTCATTGCTTTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCTAGGCCTAGGCTAAAACAAACTCTCTATTCATTGCTTTTGTT  550

seq1  AGATAGCACCTTTAACTACAGCTGCTTCTGGAATCTGTCCTAGGATTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCACCTTTAACTACAGCTGCTTCTGGAATCTGTCCTAGGATTTGT  600

seq1  CTGGCCTGACAAATTACATGACTCCCAAAGGCCCATCAGTGATCCAGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTGACAAATTACATGACTCCCAAAGGCCCATCAGTGATCCAGCTC  650

seq1  TGAGGAAATCTTCTGCTGCATTGCTGTATACAGCTTAAATGGAAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAATCTTCTGCTGCATTGCTGTATACAGCTTAAATGGAAAAGAAA  700

seq1  AGCGAGCCCTATTATAATTCCAGGAACTGGAAGCTAATCAGAGCCTCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGCCCTATTATAATTCCAGGAACTGGAAGCTAATCAGAGCCTCACA  750

seq1  TCTGCCTTTCAGCTCCTTTCTGCCTCTGTCAAGTAGGATAGGTGACCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTTCAGCTCCTTTCTGCCTCTGTCAAGTAGGATAGGTGACCCTT  800

seq1  TTTGTAAATACTGCTGTTATCAGAGATTTTGTGTTTAATGGTTACTGGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATACTGCTGTTATCAGAGATTTTGTGTTTAATGGTTACTGGGT  850

seq1  CATATTTTACAAGTGCAAATGACTTTGAGGCCCTCCATTTACTTCTAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTACAAGTGCAAATGACTTTGAGGCCCTCCATTTACTTCTAAGT  900

seq1  AATCGGCATGTCTACAAGTAGAGAAAGGCCATAAAGAAGCAAGCAGGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATCGGCATGTCTACAAGTAGAGAAAGGCCATAAAGAAGCAAGCA-GCTC  949

seq1  CTGTTCTGGTCAGCAGCTCCTGATATTCATTA-TCTCCAAGTCTGAGAGG  999
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTGTTCTGGTCAGCAGCTCCTGATATTCATTATTCTCCAAGTCTGAGAGG  999

seq1  CAGTGGCTTCCCAAATCCCACAGGTGGGGGTTATACTTCCATC-TGTAAG  1048
      ||||||||| || ||||||||||  |||| |||||||||  || ||||||
seq2  CAGTGGCTT-CCGAATCCCACAGTGGGGGTTTATACTTCATTCTTGTAAG  1048

seq1  -AGTGCGGCACAGGCTC-TTGGC-TCTGTTTTCAGTTTGGCTTGGTTTTT  1095
       |||||||||||||||| ||||| |||||||||||||  ||||| |||||
seq2  AAGTGCGGCACAGGCTCTTTGGCTTCTGTTTTCAGTT--GCTTGATTTTT  1096

seq1  T  1096
      |
seq2  T  1097