BAC Information

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BAC

Clone NameB6Ng01-330N03
Chromosome9 (Build37)
Map Location 102,465,779 - 102,466,708
singlet/doubletsinglet
Overlap genenone
Upstream geneEphb1, 9630041A04Rik, Ky, LOC664843
Downstream geneCep63, Anapc13, Amotl2, EG434510, Ryk, Slco2a1, Rab6b, Srprb, Trf, 1300017J02Rik, Topbp1, Cdv3, Bfsp2, Tmem108, 4932413F04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330N03.bB6Ng01-330N03.g
ACCGA117364GA117365
length751935
definitionB6Ng01-330N03.b B6Ng01-330N03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagatgacttagtcagggtttctattcctgcacaaatatcatga
ccaagaagcaagttggggaggaaagggtttatttggcttacacttccaca
ctgctgttcatcaccaaaggaagtcaggactggaactcaagcaggtcaga
aagcaggagctgatgcagaagccatggagggatgttctttactggcttgc
ttcccctggcttgctcagcctgctctcttatagaacccaggactaccacc
cacaaggggccctccccccttgatcaacaactgagaaaatgccccacagt
tggatctcatggaggcacttctccagctaaagctcctttctcagtggtaa
ctccagcctgtgtcaagttgacacagaaaaccagccagtacacaagacca
gccttgtctacagagctagttctaggacagccaaggctatacaaagaaac
attgtctcgaaaaaaaaaacaaatttagaaaaccattactttattgttta
gtgtgtgtgcatgcatgtgtatgtatgtctctgtgtgtgcctgtgtgtct
gtgcatgcatgcatgcatgagtgtgcatgcttgcacatgtgcgtgtgctc
cacacagtacaggcatggagagcagaagacagtttataggaatcagccct
ctcttccctcttgtggatcctgggaattgaactcaggatgtttggctttg
ttgccaggtgcctttacctggcccttcttgggttgttttggggttttttt
a
gaattctctctactctgtgaagtatgtgaagaatccctttgaatagggat
tatattgactctggagactgcttttaggactatggccatcttaacactgt
taattctgctgggcccagttgcatgggtgatcaatcgctccaccttccag
tgtcctcttcagatcctccctcggtatgtcttagttgtattacataggtt
gttcacctaggctgcgcttagccttattccaggctcttttcttgctagat
tcttggtttgtttttgggctatattcctaatggaattgtcttcttgattt
ctttctccagaagttcattattgatgtctagagacactactgattgattg
attgattgattgattgactccttgttttcacattcgtatgaaagatgtat
atgtgttgtaggtatgcatgtgtaagccagagatcaacctcagatttctt
tctctctttctttctctctttctttctttctctctctctctctttctttc
tctctttctttctctctttctctctctctctctctttcttcctttctcct
ctcctcttccttctcctcctcttcctcttccttctcttcttctgacacag
catctttctggctgacttggaatttgctatgtagaccaggttggccttga
actcacaaagctcctctgcctctacccctggagagataggattaaatgtg
tgagccactgtgcccagcctatcagctatcttttctttaggaaccttcaa
ctttgttttctgagataggatctatcacagagaaaggagcttcatttgag
gaaatgcctccatgagatccaactctaaagcattttcttcaattagtgat
caaaggggaaaggcccccttgtgggtgggaccatctctgggctggtagtc
ttgggttctttaagagatgcaggctgagctaagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_102465779_102466708
seq2: B6Ng01-330N03.g_69_1003

seq1  GAATTCTCTCTACTCTGTGAAGTATGTGAAGAATCCCTTTGAATAGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTACTCTGTGAAGTATGTGAAGAATCCCTTTGAATAGGGAT  50

seq1  TATATTGACTCTGGAGACTGCTTTTAGGACTATGGCCATCTTAACACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGACTCTGGAGACTGCTTTTAGGACTATGGCCATCTTAACACTGT  100

seq1  TAATTCTGCTGGGCCCAGTTGCATGGGTGATCAATCGCTCCACCTTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGCTGGGCCCAGTTGCATGGGTGATCAATCGCTCCACCTTCCAG  150

seq1  TGTCCTCTTCAGATCCTCCCTCGGTATGTCTTAGTTGTATTACATAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTTCAGATCCTCCCTCGGTATGTCTTAGTTGTATTACATAGGTT  200

seq1  GTTCACCTAGGCTGCGCTTAGCCTTATTCCAGGCTCTTTTCTTGCTAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCTAGGCTGCGCTTAGCCTTATTCCAGGCTCTTTTCTTGCTAGAT  250

seq1  TCTTGGTTTGTTTTTGGGCTATATTCCTAATGGAATTGTCTTCTTGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTTGTTTTTGGGCTATATTCCTAATGGAATTGTCTTCTTGATTT  300

seq1  CTTTCTCCAGAAGTTCATTATTGATGTCTAGAGACACTACTGATTGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCCAGAAGTTCATTATTGATGTCTAGAGACACTACTGATTGATTG  350

seq1  ATTGATTGATTGATTGACTCCTTGTTTTCACATTCGTATGAAAGATGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTGATTGATTGACTCCTTGTTTTCACATTCGTATGAAAGATGTAT  400

seq1  ATGTGTTGTAGGTATGCATGTGTAAGCCAGAGATCAACCTCAGATTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTGTAGGTATGCATGTGTAAGCCAGAGATCAACCTCAGATTTCTT  450

seq1  TCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTTCTTTCTCTCTTTCTTTCTTTCTCTCTCTCTCTCTTTCTTTC  500

seq1  TCTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCCTTTCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTTTCTCTCTTTCTCTCTCTCTCTCTCTTTCTTCCTTTCTCCT  550

seq1  CTCCTCTTCCTTCTCCTCCTCTTCCTCTTCCTTCTCTTCTTCTGACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTCCTTCTCCTCCTCTTCCTCTTCCTTCTCTTCTTCTGACACAG  600

seq1  CATCTTTCTGGCTGACTTGGAATTTGCTATGTAGACCAGGTTGGCCTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTCTGGCTGACTTGGAATTTGCTATGTAGACCAGGTTGGCCTTGA  650

seq1  ACTCACAAAGCTCCTCTGCCTCTACCCCTGGAGAGATAGGATTAAATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAAGCTCCTCTGCCTCTACCCCTGGAGAGATAGGATTAAATGTG  700

seq1  TGAGCCACTGTGCCCAGCCTATCAGCTATCTTTTC-TTAGGAACCTTCAA  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGAGCCACTGTGCCCAGCCTATCAGCTATCTTTTCTTTAGGAACCTTCAA  750

seq1  CTTTGTTTTCTGAGATAGGATCTATCACAGAGAAAGGAGCTTCAGTTGAG  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTGTTTTCTGAGATAGGATCTATCACAGAGAAAGGAGCTTCATTTGAG  800

seq1  GAAATGCCTCCATGAGATCCAACTCTAAGGCATTTTC-TCAATTAGTGAT  848
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  GAAATGCCTCCATGAGATCCAACTCTAAAGCATTTTCTTCAATTAGTGAT  850

seq1  CAAGGGGGAAAGG-CCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTC  897
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGGAAAGGCCCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTC  900

seq1  TTGGGTTCTATAAGAGA-GCAGGCTGAGC-AAGCC  930
      ||||||||| ||||||| ||||||||||| |||||
seq2  TTGGGTTCTTTAAGAGATGCAGGCTGAGCTAAGCC  935