BAC Information

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BAC

Clone NameB6Ng01-331F07
Chromosome9 (Build37)
Map Location 65,997,089 - 65,997,901
singlet/doubletsinglet
Overlap genenone
Upstream genePunc, Parp16, Cilp, Clpx, Pdcd7, Gm514, 5430433E21Rik, Rasl12, Ostb, Mtfmt, Spg21, Ankdd1a, Plekhq1, Pif1, LOC100041121, Rbpms2, Oaz2, Zfp609, LOC100041180, Trip4, 2810417H13Rik, Csnk1g1, Ppib, Snx22, Snx1, 5730536A07Rik
Downstream geneDapk2, Herc1, Fbxl22, Usp3, Car12, Aph1b, LOC623488, Aph1c, Rab8b, Rps27l, Lactb, Tpm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331F07.bB6Ng01-331F07.g
ACCGA117726GA117727
length760813
definitionB6Ng01-331F07.b B6Ng01-331F07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaggggcatccaggggaaagggagaagagagtagaggatgg
gtataatcaccatacattgtatgcatctatgaaactgtaaaagtttgcca
caacagtacagtagtgatcactgacggtccttctggacgacctgggtttg
attcccagcacccacatggtagctcacaaatttctataactccagttccc
ggtgatttggcatccccttctgtcctctggaggcatttccgaaagcaacc
atcttcaacaaatttttaattttagttttccttgtaagtttctaaatttt
atttccttaactcttgactttgaaaaattttaagcttacagggatgttcc
aagattaacctagattttgtttgttcttcttttctttttcatacagtgtt
tcacgcagaccaggatggcctcaaacttgatatccctaggatcagcttga
acttctgatcatcctgcctgcacctctggagcagtgggattagaggtgtg
ccatcatgtctggtttatgggtagaggactgaacctagggtttcatgcat
gttcttgtttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcctcttcctcttcctcttcctcttcctcttcctcttcttctc
ttctttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tctttcttctttttcttcttcttcttcttctctccttcatcgtcataatc
cttcttctcc
gaattccagttgtgtgaccttggacggcctaaggaacttcttgagctcct
gtgactggagctagtctctgcagactttcagggactctccagagtcaatc
tttccccatcgtgtgcttcctacagccaggctacttcacttctttgctac
cttttggcttgacaaatgaggacttacctgtcctggctcctcagtttgtc
taagaagatacagcttgcagggattctgggagtcacctgtgttagcggtt
cctctaggctctgcccaacagtttcctagcaacagccagttaggagcctg
gttcacacataaaggatcctccatcccctctctcctcactcactctccct
ccatcatctctctctctcccaacgtgttcccagctggcctcttttcctct
ctttctctctgcccttctctgacccctttctcggccctctctgtctttct
ctgcctctactcccttccccagatcccctttccaggtcccaaataaactt
cattttatactagactcattgtatggctgacaccttgagggtggggggat
gcctcaaaatgggcccactgaggcacccatcccaccacagtgtggggagc
gggtgtggcggcagtcccaaaggcgccagagactgcagctaagtcatatg
acttgcacctgacttcctcatataagacacaaacatcttgagtgctgcgc
acgtgtaccaggatacaggtgaatccaatttggtggagatttgcccctgc
tgccctgattagctgaagctgcgtgcctggtgaggtggcgtggactgctt
gtactttggatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_65997089_65997901
seq2: B6Ng01-331F07.b_47_806

seq1  GAATTCAGAGAGGGGCATCCAGGGGAAAGGGAGAAGAGAGTAGAGGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGGGGCATCCAGGGGAAAGGGAGAAGAGAGTAGAGGATGG  50

seq1  GTATAATCACCATACATTGTATGCATCTATGAAACTGTAAAAGTTTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATCACCATACATTGTATGCATCTATGAAACTGTAAAAGTTTGCCA  100

seq1  CAACAGTACAGTAGTGATCACTGACGGTCCTTCTGGACGACCTGGGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTACAGTAGTGATCACTGACGGTCCTTCTGGACGACCTGGGTTTG  150

seq1  ATTCCCAGCACCCACATGGTAGCTCACAAATTTCTATAACTCCAGTTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGCACCCACATGGTAGCTCACAAATTTCTATAACTCCAGTTCCC  200

seq1  GGTGATTTGGCATCCCCTTCTGTCCTCTGGAGGCATTTCCGAAAGCAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTGGCATCCCCTTCTGTCCTCTGGAGGCATTTCCGAAAGCAACC  250

seq1  ATCTTCAACAAATTTTTAATTTTAGTTTTCCTTGTAAGTTTCTAAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAACAAATTTTTAATTTTAGTTTTCCTTGTAAGTTTCTAAATTTT  300

seq1  ATTTCCTTAACTCTTGACTTTGAAAAATTTTAAGCTTACAGGGATGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTAACTCTTGACTTTGAAAAATTTTAAGCTTACAGGGATGTTCC  350

seq1  AAGATTAACCTAGATTTTGTTTGTTCTTCTTTTCTTTTTCATACAGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAACCTAGATTTTGTTTGTTCTTCTTTTCTTTTTCATACAGTGTT  400

seq1  TCACGCAGACCAGGATGGCCTCAAACTTGATATCCCTAGGATCAGCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGCAGACCAGGATGGCCTCAAACTTGATATCCCTAGGATCAGCTTGA  450

seq1  ACTTCTGATCATCCTGCCTGCACCTCTGGAGCAGTGGGATTAGAGGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGATCATCCTGCCTGCACCTCTGGAGCAGTGGGATTAGAGGTGTG  500

seq1  CCATCATGTCTGGTTTATGGGTAGAGGACTGAACCTAGGGTTTCATGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATGTCTGGTTTATGGGTAGAGGACTGAACCTAGGGTTTCATGCAT  550

seq1  GTTCTTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  600

seq1  TTCTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCTTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCCTCTTCTTCTC  650

seq1  TTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  700

seq1  TC-TTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-TTTT  748
      || ||||||||||||||||||||||||||| ||| |||| || || |  |
seq2  TCTTTCTTCTTTTTCTTCTTCTTCTTCTTC-TCTCCTTCATCGTCATAAT  749

seq1  TCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCTTCTTCTCTTCTTTCTTC  798
       |||||||| |                                       
seq2  CCTTCTTCTCC---------------------------------------  760

seq1  TTCTTCTTCTTCTCC  813
                     
seq2  ---------------  760