BAC Information

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BAC

Clone NameB6Ng01-336E09
Chromosome9 (Build37)
Map Location 37,581,165 - 37,665,443
singlet/doubletdoublet
Overlap geneOlfr875, Olfr876, Olfr877
Upstream geneEi24, LOC627681, Fez1, Pknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874
Downstream geneOlfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336E09.bB6Ng01-336E09.g
ACCGA121241GA121242
length1,1481,149
definitionB6Ng01-336E09.b B6Ng01-336E09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,664,277 - 37,665,443)(37,581,165 - 37,582,329)
sequence
gaattctaggccaagtaagagaatccaaatcaacaaacaaaatggacaac
acctgagtagtgacacctgatgttcatctctgccctccacatgcatatgc
acccataaccatagaccttcatgcgtgagcacacatgctcagactaacac
tgagttaagtaggagaaagaaatgaatcgacacttagagaggacaatatc
caaatagctaataaacatgtaagaaatccacatcactgtttctctaggaa
acttgataggaatgcatatagtgctattttactgcccagctagcagagca
ctgaagtgagaaacactgaaaataaccaatgttcatatagaaaagaaata
ttcttacctaaaagttgtttaggaaagcaaaaatagtttaaatactttgt
gacagtactttgtgatatttagaaatcctatgtcacagaaaaccacaaat
gtacattcccaagagaagagtacacactagacataatactttcttgattt
tcaaagaaactttattagtaatatgcagattatagaaacaaatatctact
gagacaacaagtaagaaaaattatgtattagaatacatactgaaaagcaa
tacctaagaaaaatattatgagagtatttacaatcaaagtagccagcatt
caaaagataatgtgataggctatggatgctgctcaatgctggcatgtgca
tggcccttgattccaacactgcaaaaataaaataaagttaactaaaatgt
aattgtgcagtttaatgcttagaatgaagctcaaggctaagcaaaccaag
cctgcaagaatcagagtcaggagaacaggtatccccagcaaaagaattaa
tttactgagaattttactgggaacagccaagaacattctgaaacgatgga
aattgtcaactctaagtctaagcgatgctattagttacatatactgaggg
ggaaatctgctgaacacttgatactcatgtgctttttgtcacacttcatt
ttaaagggatggacccaaactgacagtcataaaagaaaaaagaaaagaaa
agaagaaaaaagctgacaagacttggaagaaggactgtattcacttctgg
tgggaagataatagtcgaggtactagagaacaattagaaatactgaaa
gaattctttcttaacagaggagcagtatcatgagctacagtggtgtgact
ggtcagtgagcagtgttcatatggaaagatctgtatttggataagaagat
gcaatgttgctatgaggagtacaaggtctggtcatttttcccccttcttg
tacaagaagagaagtttatggcactatggagaaactaggtcgtcatggat
actgggtaattgtttatccaacaaattacatgcagcccagaaacagggtt
tcaaatccttacatttgagcaacattttaacacagctttgttcttcctga
ctcttactctgccaaaactctttcaatatttattttttaatgaaaaatat
gtacttgtcaattgaatatgcagaaatgtataattaacattcattttctc
tcattcataagctagttttctgtaatttacaaacattgagcataatagca
atttttgtcatgttgcagtggccagcttttgccatttgttcaatatttaa
tatattgcattttgtaataatcatggaatatttatctatatttagtagat
attgaagatatagaaatatgttttattcaagaacataaaactatttgcta
tcaaaataatctcaagtttagaaagttgaattcatgtatgtattattttc
ctttatgttgttttcttgccatattacccttttttaggatttctttttaa
aataataatttttaaattattttgttttttgaaattaaaatataattata
taggttcccttttctctttcaaccctccagcccatcctatgtaccctctt
tttctcccaaatttatgactctctgttccttaattgttacatctttctaa
atatataaatgcaattttgttattttttttaatattcttgcctgttgcta
ttatttgtcaaggcctaccatctgggccttttgacttattctcttttaaa
tcatgatataaattaaaatcttatctatatatataattcatgcaacttct
cagaagacatttttggggtggtggtagagatgactcagcagtcacacaca
cacattttgctgctagtccgtggactgtacatagtattagtatcaggttc
tgtttgctacactctgtagctatagtctaaaggatcaactcttgtccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37664277_37665443
seq2: B6Ng01-336E09.b_53_1200 (reverse)

seq1  TTTCAAGGTATTTCTATATTGTTCTCTAGTACCTCGACTAATTTATCTTC  50
      |||||  ||||||||| |||||||||||||||||||||||  ||||||||
seq2  TTTCA--GTATTTCTA-ATTGTTCTCTAGTACCTCGACTA--TTATCTTC  45

seq1  CCACCAAGAAGTGAATACAGGTTCCTTTCTTCCAAGTCTTTGTCAGCTTT  100
      ||||| ||||||||||||||  ||| |||||||||||| |||||||| ||
seq2  CCACC-AGAAGTGAATACAG--TCC-TTCTTCCAAGTC-TTGTCAGC-TT  89

seq1  TTTTCTTTCTTTTTCTTTTTCTTTTTTTCTTTTAATGACCTGTCAGTTTG  150
      |||||||   |||||||||   ||||||||||| |||| |||||||||||
seq2  TTTTCTT--CTTTTCTTTT--CTTTTTTCTTTT-ATGA-CTGTCAGTTTG  133

seq1  GGTCCATTCCCTTTAAAATTGAAGTGTGACAAAAAGCACATGAGTATCAA  200
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  GGTCCA-TCCCTTTAAAA-TGAAGTGTGACAAAAAGCACATGAGTATCAA  181

seq1  GTGTTCAGCAGATTTCCCCCTCAGTATATGTAACTAATAGCATCGCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAGCAGATTTCCCCCTCAGTATATGTAACTAATAGCATCGCTTAG  231

seq1  ACTTAGAGTTGACAATTTCCATCGTTTCAGAATGTTCTTGGCTGTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAGTTGACAATTTCCATCGTTTCAGAATGTTCTTGGCTGTTCCCA  281

seq1  GTAAAATTCTCAGTAAATTAATTCTTTTGCTGGGGATACCTGTTCTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTCTCAGTAAATTAATTCTTTTGCTGGGGATACCTGTTCTCCTG  331

seq1  ACTCTGATTCTTGCAGGCTTGGTTTGCTTAGCCTTGAGCTTCATTCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATTCTTGCAGGCTTGGTTTGCTTAGCCTTGAGCTTCATTCTAAG  381

seq1  CATTAAACTGCACAATTACATTTTAGTTAACTTTATTTTATTTTTGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAACTGCACAATTACATTTTAGTTAACTTTATTTTATTTTTGCAGT  431

seq1  GTTGGAATCAAGGGCCATGCACATGCCAGCATTGAGCAGCATCCATAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAATCAAGGGCCATGCACATGCCAGCATTGAGCAGCATCCATAGCC  481

seq1  TATCACATTATCTTTTGAATGCTGGCTACTTTGATTGTAAATACTCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATTATCTTTTGAATGCTGGCTACTTTGATTGTAAATACTCTCAT  531

seq1  AATATTTTTCTTAGGTATTGCTTTTCAGTATGTATTCTAATACATAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTCTTAGGTATTGCTTTTCAGTATGTATTCTAATACATAATTT  581

seq1  TTCTTACTTGTTGTCTCAGTAGATATTTGTTTCTATAATCTGCATATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTTGTTGTCTCAGTAGATATTTGTTTCTATAATCTGCATATTAC  631

seq1  TAATAAAGTTTCTTTGAAAATCAAGAAAGTATTATGTCTAGTGTGTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGTTTCTTTGAAAATCAAGAAAGTATTATGTCTAGTGTGTACTC  681

seq1  TTCTCTTGGGAATGTACATTTGTGGTTTTCTGTGACATAGGATTTCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGGGAATGTACATTTGTGGTTTTCTGTGACATAGGATTTCTAAA  731

seq1  TATCACAAAGTACTGTCACAAAGTATTTAAACTATTTTTGCTTTCCTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAAAGTACTGTCACAAAGTATTTAAACTATTTTTGCTTTCCTAAA  781

seq1  CAACTTTTAGGTAAGAATATTTCTTTTCTATATGAACATTGGTTATTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTAGGTAAGAATATTTCTTTTCTATATGAACATTGGTTATTTTC  831

seq1  AGTGTTTCTCACTTCAGTGCTCTGCTAGCTGGGCAGTAAAATAGCACTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCTCACTTCAGTGCTCTGCTAGCTGGGCAGTAAAATAGCACTAT  881

seq1  ATGCATTCCTATCAAGTTTCCTAGAGAAACAGTGATGTGGATTTCTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCCTATCAAGTTTCCTAGAGAAACAGTGATGTGGATTTCTTACA  931

seq1  TGTTTATTAGCTATTTGGATATTGTCCTCTCTAAGTGTCGATTCATTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTAGCTATTTGGATATTGTCCTCTCTAAGTGTCGATTCATTTCT  981

seq1  TTCTCCTACTTAACTCAGTGTTAGTCTGAGCATGTGTGCTCACGCATGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTACTTAACTCAGTGTTAGTCTGAGCATGTGTGCTCACGCATGAA  1031

seq1  GGTCTATGGTTATGGGTGCATATGCATGTGGAGGGCAGAGATGAACATCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATGGTTATGGGTGCATATGCATGTGGAGGGCAGAGATGAACATCA  1081

seq1  GGTGTCACTACTCAGGTGTTGTCCATTTTGTTTGTTGATTTGGATTCTCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCACTACTCAGGTGTTGTCCATTTTGTTTGTTGATTTGGATTCTCT  1131

seq1  TACTTGGCCTAGAATTC  1167
      |||||||||||||||||
seq2  TACTTGGCCTAGAATTC  1148

seq1: chr9_37581165_37582329
seq2: B6Ng01-336E09.g_64_1212

seq1  GAATTCTTTCTTAACAGAGGAGCAGTATCATGAGCTACAGTGGTGTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTAACAGAGGAGCAGTATCATGAGCTACAGTGGTGTGACT  50

seq1  GGTCAGTGAGCAGTGTTCATATGGAAAGATCTGTATTTGGATAAGAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTGAGCAGTGTTCATATGGAAAGATCTGTATTTGGATAAGAAGAT  100

seq1  GCAATGTTGCTATGAGGAGTACAAGGTCTGGTCATTTTTCCCCCTTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTTGCTATGAGGAGTACAAGGTCTGGTCATTTTTCCCCCTTCTTG  150

seq1  TACAAGAAGAGAAGTTTATGGCACTATGGAGAAACTAGGTCGTCATGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAGAGAAGTTTATGGCACTATGGAGAAACTAGGTCGTCATGGAT  200

seq1  ACTGGGTAATTGTTTATCCAACAAATTACATGCAGCCCAGAAACAGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTAATTGTTTATCCAACAAATTACATGCAGCCCAGAAACAGGGTT  250

seq1  TCAAATCCTTACATTTGAGCAACATTTTAACACAGCTTTGTTCTTCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCTTACATTTGAGCAACATTTTAACACAGCTTTGTTCTTCCTGA  300

seq1  CTCTTACTCTGCCAAAACTCTTTCAATATTTATTTTTTAATGAAAAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACTCTGCCAAAACTCTTTCAATATTTATTTTTTAATGAAAAATAT  350

seq1  GTACTTGTCAATTGAATATGCAGAAATGTATAATTAACATTCATTTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGTCAATTGAATATGCAGAAATGTATAATTAACATTCATTTTCTC  400

seq1  TCATTCATAAGCTAGTTTTCTGTAATTTACAAACATTGAGCATAATAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATAAGCTAGTTTTCTGTAATTTACAAACATTGAGCATAATAGCA  450

seq1  ATTTTTGTCATGTTGCAGTGGCCAGCTTTTGCCATTTGTTCAATATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCATGTTGCAGTGGCCAGCTTTTGCCATTTGTTCAATATTTAA  500

seq1  TATATTGCATTTTGTAATAATCATGGAATATTTATCTATATTTAGTAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCATTTTGTAATAATCATGGAATATTTATCTATATTTAGTAGAT  550

seq1  ATTGAAGATATAGAAATATGTTTTATTCAAGAACATAAAACTATTTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGATATAGAAATATGTTTTATTCAAGAACATAAAACTATTTGCTA  600

seq1  TCAAAATAATCTCAAGTTTAGAAAGTTGAATTCATGTATGTATTATTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAATCTCAAGTTTAGAAAGTTGAATTCATGTATGTATTATTTTC  650

seq1  CTTTATGTTGTTTTCTTGCCATATTACCCTTTTTTAGGATTTCTTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTTGTTTTCTTGCCATATTACCCTTTTTTAGGATTTCTTTTTAA  700

seq1  AATAATAATTTTTAAATTATTTTGTTTTTTGAAATTAAAATATAATTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATTTTTAAATTATTTTGTTTTTTGAAATTAAAATATAATTATA  750

seq1  TAGGTTCCCTTTTCTCTTTCAACCCTCCAGCCCATCCTATGTACCCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCCCTTTTCTCTTTCAACCCTCCAGCCCATCCTATGTACCCTCTT  800

seq1  TTTCTCCCAAATTTATGACTCTCTGTTCCTTAATTGTTACATCTTTCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCAAATTTATGACTCTCTGTTCCTTAATTGTTACATCTTTCTAA  850

seq1  ATATATAAATGCAATTTTGTTATTTTTTTTAATATTCTTGCCTGTTGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAATGCAATTTTGTTATTTTTTTTAATATTCTTGCCTGTTGCTA  900

seq1  TTATTTGTCAAGGCCTACCATCT-GGCCTTTTGACTTATTTCTCTTTTAA  949
      ||||||||||||||||||||||| |||||||||||||| ||||||||| |
seq2  TTATTTGTCAAGGCCTACCATCTGGGCCTTTTGACTTA-TTCTCTTTT-A  948

seq1  AATCATGATAATAAATTAAAATCTTATCTTATATATAATAATTCAATGCA  999
      ||||||||| |||||||||||||||||| ||||||| ||||||| |||||
seq2  AATCATGAT-ATAAATTAAAATCTTATC-TATATAT-ATAATTC-ATGCA  994

seq1  ACTTCTCAGAAGACAATTTTTGGGGTGGTGGTAGAGATGACTCAGCAGTC  1049
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACTTCTCAGAAGAC-ATTTTTGGGGTGGTGGTAGAGATGACTCAGCAGTC  1043

seq1  ACACACACACATTTTGCTGCTAGTCCGGTGGACCTGTACATAGTTATTAG  1099
      |||||||||||||||||||||||||| ||||| |||||||||| ||||||
seq2  ACACACACACATTTTGCTGCTAGTCC-GTGGA-CTGTACATAG-TATTAG  1090

seq1  TATCCAGGTTCTG-TTGCTACCAACTCCCTGTAGCTATAGTTCTAGAGGA  1148
      ||| ||||||||| |||||||  |||  |||||||||||| |||| ||||
seq2  TAT-CAGGTTCTGTTTGCTAC--ACT--CTGTAGCTATAG-TCTAAAGGA  1134

seq1  TCCAACATCTTGTCCTA  1165
      | |||| ||||||||||
seq2  T-CAAC-TCTTGTCCTA  1149