BAC Information

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BAC

Clone NameB6Ng01-341H18
Chromosome9 (Build37)
Map Location 77,736,428 - 77,737,051
singlet/doubletsinglet
Overlap genenone
Upstream geneTinag, LOC436082, 2310046A06Rik, 5730403I07Rik, Lrrc1, Klhl31, Gclc, LOC100042212
Downstream geneElovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341H18.bB6Ng01-341H18.g
ACCGA124854GA124855
length1,099949
definitionB6Ng01-341H18.b B6Ng01-341H18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggaactgaagttttaaacagttgtgagccaccatgtgactt
ctgggaatcaaatctgggtcttcttgcaagagcagtcagtgcttttaaat
gctgaactatctctccaacctggcatagaacactttaaataaggtttctt
tcctgtggctggaacagcagaggagctatgagctcccagagaaggaaaca
ttaagacacagaagtattttaagcttgtttttcaagcctgcacaagagct
acgtttggggaggagactgagacaccattgagggaatctagctgttgaag
ctgaagtgtcctttctctgggcctgtcagagagaaggcctggcctgcagg
agctgccactgtcaacctacccaaaagattaaatatttagggcactttgg
agagagaagttgcctatgctttgaaaagataagtctaaatctagcacctt
agaccacccctacatgctaccttccatgagagcccacattgatgcccatg
acctgtgctgccaccaaaggccatgatcaagttcagagaactatgtggat
gcccgtggtctgtgttcctgtaggaggccatcttgatgtctgtagtccat
gttatcatcaaaagtcaagtggatgcccttggtctgttcaaccgccaggg
gccatgttggtgtccatggcctgtgcccacatcatgatggtgtttgtggt
ccgggctgtggccaaggagatgttgatgtccttgttctgtgctatcaccg
aagagcatgctgaggtccttggtctgtgttgacactagaggccatgtgga
tgttcacgattcgtgctgtcacccgatttccacacagaagtccatggtcc
atgtgctgctgctgataaaggacaaagaggcttctcttacaggacttgta
gatgtcttgcagactcacatttgaggaggagaggcatagaacagcttctt
gagacagcctatcccaccccccactagcacttccattcttcagaaaagaa
agagtctagacaggaagccattaaagcaactcttaaaaaatgcctgaagt
gtagctcttcatagctgaatagcttatgaatggggggtggggggtgggg
gaattcttgagataagagaaacagttgtcccagatgattgtcctggtgtg
accattaagccttctggaggtatatgatgtgtgtcaagggagccatagca
aggagagagaaagggggacagaggaggcctctttttctttcttgttgtta
cataattacaagcacattaatatagaaacacaacctgctgagaccattta
gtgctgcttgcatgtatatgttttcagggctgaccacaaagccattagga
agctcattcctagagaagactttctccttttcatcaaggtcatgaattgc
ccatagctcttcctgtagaaatggggctcagtgagacctctcccctccgt
ggtagcatgtctattggtattatcattgcctagcattgtttaggcagcca
tattgttaggaatccatagctgtagcttctacttctgtgacatgtctagg
aaacacatctcagcaggctttgtaatcctagcccttacaatacctctgtt
cctctcttatgcagtgcaccctgaaccttgatataaggggtgtgctgtag
atctgtcaagtgaaacggaacaacccatggccagtcgttttctgggtttt
gaccactagttctctgtaacggtttctgcctgctgcaaagagacacttct
ttgaaaaggggtgaaggctacacttatctgtgggtatagtgatacgtagt
tagcatgaagttagaaattacactggcttagcaaaatgacagcattagtt
tctcctctaagatccatgaccccactagctatgtgtagttggctaagtat
tcagtactaggaatgacttccctccactcgaatgggccttaaaaagccag
ttggacagctgtttcattactgccgagatacaaacaccactattacaaac
ttaggactatcttccatgctggtcattgtcatggttcataggtgtcacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_77736428_77737051
seq2: B6Ng01-341H18.g_68_691

seq1  GAATTCTTGAGATAAGAGAAACAGTTGTCCCAGATGATTGTCCTGGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGATAAGAGAAACAGTTGTCCCAGATGATTGTCCTGGTGTG  50

seq1  ACCATTAAGCCTTCTGGAGGTATATGATGTGTGTCAAGGGAGCCATAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAAGCCTTCTGGAGGTATATGATGTGTGTCAAGGGAGCCATAGCA  100

seq1  AGGAGAGAGAAAGGGGGACAGAGGAGGCCTCTTTTTCTTTCTTGTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGAAAGGGGGACAGAGGAGGCCTCTTTTTCTTTCTTGTTGTTA  150

seq1  CATAATTACAAGCACATTAATATAGAAACACAACCTGCTGAGACCATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTACAAGCACATTAATATAGAAACACAACCTGCTGAGACCATTTA  200

seq1  GTGCTGCTTGCATGTATATGTTTTCAGGGCTGACCACAAAGCCATTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCTTGCATGTATATGTTTTCAGGGCTGACCACAAAGCCATTAGGA  250

seq1  AGCTCATTCCTAGAGAAGACTTTCTCCTTTTCATCAAGGTCATGAATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATTCCTAGAGAAGACTTTCTCCTTTTCATCAAGGTCATGAATTGC  300

seq1  CCATAGCTCTTCCTGTAGAAATGGGGCTCAGTGAGACCTCTCCCCTCCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCTCTTCCTGTAGAAATGGGGCTCAGTGAGACCTCTCCCCTCCGT  350

seq1  GGTAGCATGTCTATTGGTATTATCATTGCCTAGCATTGTTTAGGCAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCATGTCTATTGGTATTATCATTGCCTAGCATTGTTTAGGCAGCCA  400

seq1  TATTGTTAGGAATCCATAGCTGTAGCTTCTACTTCTGTGACATGTCTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTAGGAATCCATAGCTGTAGCTTCTACTTCTGTGACATGTCTAGG  450

seq1  AAACACATCTCAGCAGGCTTTGTAATCCTAGCCCTTACAATACCTCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATCTCAGCAGGCTTTGTAATCCTAGCCCTTACAATACCTCTGTT  500

seq1  CCTCTCTTATGCAGTGCACCCTGAACCTTGATATAAGGGGTGTGCTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTATGCAGTGCACCCTGAACCTTGATATAAGGGGTGTGCTGTAG  550

seq1  ATCTGTCAAGTGAAACGGAACAACCCATGGCCAGTCGTTTTCTGGGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCAAGTGAAACGGAACAACCCATGGCCAGTCGTTTTCTGGGTTTT  600

seq1  GACCACTAGTTCTCTGTAACGGTT  624
      ||||||||||||||||||||||||
seq2  GACCACTAGTTCTCTGTAACGGTT  624