BAC Information

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BAC

Clone NameB6Ng01-344L22
Chromosome9 (Build37)
Map Location 92,658,728 - 92,766,735
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009
Downstream geneLOC100040114, LOC674371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344L22.bB6Ng01-344L22.g
ACCGA127150GA127151
length3441,040
definitionB6Ng01-344L22.b B6Ng01-344L22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,658,728 - 92,659,071)(92,765,709 - 92,766,735)
sequence
aaggccagcctaggctaaataatgagactttgtttcaagaaagagtaaaa
gcatcatgctgattttattcatgttcattatatttctaagagaaaaaata
atgtatttttattctaaaattaccttctcctgtgcatccacagggtagag
cttatgtcctggacacttgggaattgtgcttctttgttctttaagacaat
aactcaaggaatccagcactatgatagagtgcacacagacatacaccatg
gacatatgcacatgtatacatatatagacacacacacacatacaaaatga
atatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

gaattcactgagataaagtcagacagaatggctgatgctcttcatgcctt
ttcaatatctcttgcctttctaagaaacagccgctctggaaagatgagag
gaaaagagagagatgaggatagagtaacagggagaatggcttcaataaga
cacactgctaaagctccatgaatctgcacctcaacaaacttagcattaat
atattttctattattataattattattattatttagttgtgtactggata
gttctgtgtcaacttgacataggctagagttatcacagagaaaggagctt
ccgttggggaaatgcctcaatgaaatccagctgtaaggcattttctcaat
tagtgttcaaggggggaggtccccctgtgggtggtgccatctctgggctg
gtagtcttgggttctataagagagcaagctgagcaagcaaagggaagcaa
gtcagtaaagaccatccctccatggcctctgcatcagctcgggcttcctg
acctgcttgagtcccaatgctgacttccttggtgatgaacagcagtataa
gtgtaagccgaataaaccctttcctccccaacttgcttcttggtcatgat
ctttgtgcaggaatagaaaccctgactaagacaagttgtttcgagataag
gattttctgcataaccttgaatgtcctggaactcactctgtagatcaggc
tggcctcgaacttcaaagagatccacttgtcctccagtaatggaatttaa
agtcatgtgccaccactgtctaccctgcaatcaatttttaattagtattt
aaaagttctactgtgtgatcctttttttcaaaatttaatctcaaagtttg
cttcaaatatattttttacttagccaaattgggaaaagacttatgggatt
ttgataaatgtctttcttcttgattctatcctaattgtgggtagcatcag
taattgagctattctttgttggttctaatttttctaacgaagtttactgc
taatgaaccaaaaaactttctgtctctgtggataactcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_92658728_92659071
seq2: B6Ng01-344L22.b_55_398

seq1  AAGGCCAGCCTAGGCTAAATAATGAGACTTTGTTTCAAGAAAGAGTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGCCTAGGCTAAATAATGAGACTTTGTTTCAAGAAAGAGTAAAA  50

seq1  GCATCATGCTGATTTTATTCATGTTCATTATATTTCTAAGAGAAAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATGCTGATTTTATTCATGTTCATTATATTTCTAAGAGAAAAAATA  100

seq1  ATGTATTTTTATTCTAAAATTACCTTCTCCTGTGCATCCACAGGGTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTTTATTCTAAAATTACCTTCTCCTGTGCATCCACAGGGTAGAG  150

seq1  CTTATGTCCTGGACACTTGGGAATTGTGCTTCTTTGTTCTTTAAGACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTCCTGGACACTTGGGAATTGTGCTTCTTTGTTCTTTAAGACAAT  200

seq1  AACTCAAGGAATCCAGCACTATGATAGAGTGCACACAGACATACACCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAAGGAATCCAGCACTATGATAGAGTGCACACAGACATACACCATG  250

seq1  GACATATGCACATGTATACATATATAGACACACACACACATACAAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATGCACATGTATACATATATAGACACACACACACATACAAAATGA  300

seq1  ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  344


seq1: chr9_92765709_92766735
seq2: B6Ng01-344L22.g_62_1101 (reverse)

seq1  TTGAGTTATACACAGAG-CAG-AAGTTATTTGGCTCATTAG-AGTTAAAC  47
      | ||||||| ||||||| ||| ||||| ||||| ||||||| ||| ||  
seq2  TAGAGTTATCCACAGAGACAGAAAGTTTTTTGGTTCATTAGCAGTAAACT  50

seq1  TCTGTAGAAAAATAAAGAACAAAC-AAGAATAGCTCAATTACTGATGCTA  96
      ||  |||||||||  ||||| ||| |||||||||||||||||||||||||
seq2  TCGTTAGAAAAAT-TAGAACCAACAAAGAATAGCTCAATTACTGATGCTA  99

seq1  CCAAAAAT--AGATAAAATCAAGAAGAAAGACATTTATCAAAAT-CCATA  143
      || | |||   |||| |||||||||||||||||||||||||||| |||||
seq2  CCCACAATTAGGATAGAATCAAGAAGAAAGACATTTATCAAAATCCCATA  149

seq1  AGTCTTTT-CCAATTT-GCTAAGT-AAAAATATATTTGAAGCAAACTTTG  190
      |||||||| ||||||| ||||||| |||||||||||||||||||||||||
seq2  AGTCTTTTCCCAATTTGGCTAAGTAAAAAATATATTTGAAGCAAACTTTG  199

seq1  AGATT-AATTTTG-AAAAAAGGATCACACAGTAGAACTTTTAAATACTAA  238
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGATTAAATTTTGAAAAAAAGGATCACACAGTAGAACTTTTAAATACTAA  249

seq1  TTAAAAATTGATTGCAGGGTAGACAGTGGTGGCACATGACTTT-AATTCC  287
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTAAAAATTGATTGCAGGGTAGACAGTGGTGGCACATGACTTTAAATTCC  299

seq1  ATTACTGGAGGACAAGTGGATCTCTTTG-AGTTCGAGGCCAGCCTGATCT  336
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATTACTGGAGGACAAGTGGATCTCTTTGAAGTTCGAGGCCAGCCTGATCT  349

seq1  ACAGAGTGAGTTCCAGGACATTCAAGGTTATGCAGAAAATCCTTATCTCG  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTGAGTTCCAGGACATTCAAGGTTATGCAGAAAATCCTTATCTCG  399

seq1  AAACAACTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAAGATCATGACC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACTTGTCTTAGTCAGGGTTTCTATTCCTGCACAAAGATCATGACC  449

seq1  AAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTATACTGC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCGGCTTACACTTATACTGC  499

seq1  TGTTCATCACCAAGGAAGTCAGCATTGGGACTCAAGCAGGTCAGGAAGCC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATCACCAAGGAAGTCAGCATTGGGACTCAAGCAGGTCAGGAAGCC  549

seq1  CGAGCTGATGCAGAGGCCATGGAGGGATGGTCTTTACTGACTTGCTTCCC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTGATGCAGAGGCCATGGAGGGATGGTCTTTACTGACTTGCTTCCC  599

seq1  TTTGCTTGCTCAGCTTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGCTCAGCTTGCTCTCTTATAGAACCCAAGACTACCAGCCCAGA  649

seq1  GATGGCACCACCCACAGGGGGACCTCCCCCCTTGAACACTAATTGAGAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCACCACCCACAGGGGGACCTCCCCCCTTGAACACTAATTGAGAAA  699

seq1  ATGCCTTACAGCTGGATTTCATTGAGGCATTTCCCCAACGGAAGCTCCTT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTACAGCTGGATTTCATTGAGGCATTTCCCCAACGGAAGCTCCTT  749

seq1  TCTCTGTGATAACTCTAGCCTATGTCAAGTTGACACAGAACTATCCAGTA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGATAACTCTAGCCTATGTCAAGTTGACACAGAACTATCCAGTA  799

seq1  CACAACTAAATAATAATAATAATTATAATAATAGAAAATATATTAATGCT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTAAATAATAATAATAATTATAATAATAGAAAATATATTAATGCT  849

seq1  AAGTTTGTTGAGGTGCAGATTCATGGAGCTTTAGCAGTGTGTCTTATTGA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGTTGAGGTGCAGATTCATGGAGCTTTAGCAGTGTGTCTTATTGA  899

seq1  AGCCATTCTCCCTGTTACTCTATCCTCATCTCTCTCTTTTCCTCTCATCT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCTCCCTGTTACTCTATCCTCATCTCTCTCTTTTCCTCTCATCT  949

seq1  TTCCAGAGCGGCTGTTTCTTAGAAAGGCAAGAGATATTGAAAAGGCATGA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGCGGCTGTTTCTTAGAAAGGCAAGAGATATTGAAAAGGCATGA  999

seq1  AGAGCATCAGCCATTCTGTCTGACTTTATCTCAGTGAATTC  1027
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATCAGCCATTCTGTCTGACTTTATCTCAGTGAATTC  1040


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