MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-345C04
Chromosome	9 (Build37)
Map Location	62,871,083 - 63,023,864
singlet/doublet	doublet
Overlap gene	LOC100039976, Ppia-ps9_818.1, Lbxcor1, Map2k5
Upstream gene	Paqr5, Glce, Spesp1, LOC100039897, Anp32a, Coro2b, Itga11, EG665478, Fem1b, Cln6, Calml4, Pias1
Downstream gene	2300009A05Rik, Iqch, LOC621763, 2310007F21Rik, Smad3, LOC100040009, Smad6, 2600006L11Rik, Lctl, Zwilch, Rpl4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Paqr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74090 MGI:1921340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glce (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93683 MGI:2136405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spesp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66712 MGI:1913962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039897 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039897
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Anp32a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11737 MGI:108447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Coro2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235431 MGI:2444283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itga11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319480 MGI:2442114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665478 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665478 MGI:3643729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Fem1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14155 MGI:1335087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cln6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76524 MGI:2159324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Calml4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75600 MGI:1922850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pias1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56469 MGI:1913125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039976 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039976
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ppia-ps9_818.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606730
definition	note : peptidylprolyl isomerase A (Ppia) pseudogene 9_818.1 pseudo : _no_value

name	Lbxcor1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207667 MGI:2443473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map2k5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23938 MGI:1346345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2300009A05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69478 MGI:1916728
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 2 Proteins

name	Iqch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78250 MGI:1925500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 2 Proteins

name	LOC621763 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 3 Proteins pseudo : _no_value

name	2310007F21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66939 MGI:1914189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17127 MGI:1201674
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040009 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Smad6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17130 MGI:1336883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2600006L11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76814 MGI:1924064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Lctl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235435 MGI:2183549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zwilch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68014 MGI:1915264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67891 MGI:1915141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paqr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383667 GeneID:74090 MGI:1921340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : progestin and adipoQ receptor family member V transcript_id : NM_028748.2

name	Glce (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892759 GeneID:93683 MGI:2136405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucuronyl C5-epimerase transcript_id : NM_033320.4

name	Spesp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802273 GeneID:66712 MGI:1913962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm equatorial segment protein 1 transcript_id : NM_025721.2

name	Anp32a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254599 GeneID:11737 MGI:108447
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acidic (leucine-rich) nuclear phosphoprotein 32 family, member A transcript_id : NM_009672.2

name	Coro2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803424 GeneID:235431 MGI:2444283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coronin, actin binding protein, 2B transcript_id : NM_175484.2

name	Itga11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254394 GeneID:319480 MGI:2442114
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin, alpha 11 transcript_id : NM_176922.4

name	Fem1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402518 GeneID:14155 MGI:1335087
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : feminization 1 homolog b (C. elegans) transcript_id : NM_010193.3

name	Cln6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372439 GeneID:76524 MGI:2159324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceroid-lipofuscinosis, neuronal 6 transcript_id : NM_001033175.2

name	Calml4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129956 GeneID:75600 MGI:1922850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmodulin-like 4 transcript_id : NM_138304.2

name	Pias1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361261 GeneID:56469 MGI:1913125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein inhibitor of activated STAT 1 transcript_id : NM_019663.3

name	Lbxcor1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383959 GeneID:207667 MGI:2443473
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ladybird homeobox 1 homolog (Drosophila) corepressor 1 transcript_id : NM_172446.2

name	Map2k5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130017 GeneID:23938 MGI:1346345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase 5 transcript_id : NM_011840.2

name	2300009A05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386166 GeneID:69478 MGI:1916728
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein product : RIKEN cDNA 2300009A05 gene, transcript variant 3 transcript_id : XM_898537.2

name	2300009A05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386167 GeneID:69478 MGI:1916728
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 1 Protein product : RIKEN cDNA 2300009A05 gene, transcript variant 1 transcript_id : XM_204313.6

name	Iqch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386168 GeneID:78250 MGI:1925500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 2 Proteins product : IQ motif containing H, transcript variant 1 transcript_id : XM_134960.5

name	Iqch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260023 GeneID:78250 MGI:1925500
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 1 Protein product : IQ motif containing H transcript_id : XM_001475908.1

name	2310007F21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802812 GeneID:66939 MGI:1914189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310007F21 gene transcript_id : NM_025857.2

name	Smad3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801800 GeneID:17127 MGI:1201674
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 3 (Drosophila) transcript_id : NM_016769.3

name	Smad6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560672 GeneID:17130 MGI:1336883
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 6 (Drosophila) transcript_id : NM_008542.2

name	2600006L11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260001 GeneID:76814 MGI:1924064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600006L11 gene transcript_id : XM_001473989.1

name	Lctl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802015 GeneID:235435 MGI:2183549
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactase-like transcript_id : NM_145835.2

name	Zwilch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71143133 GeneID:68014 MGI:1915264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Zwilch, kinetochore associated, homolog (Drosophila) transcript_id : NM_026507.3

name	Rpl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374582 GeneID:67891 MGI:1915141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L4 transcript_id : NM_024212.3

name	Glce (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301488 CCDS:CCDS23262.1 GeneID:93683 MGI:2136405
definition	GO_component : GO:0005618 - cell wall [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IMP] [Evidence IDA] GO_process : GO:0006024 - glycosaminoglycan biosynthesis [Evidence IEA]; GO:0015012 - heparan sulfate proteoglycan biosynthesis [Evidence IDA]; GO:0030210 - heparin biosynthesis [Evidence IDA]; GO:0009252 - peptidoglycan biosynthesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA] codon_start : 1 note : heparan sulfate-glucuronic acid C5-epimerase product : D-glucuronyl C5-epimerase protein_id : NP_201577.3

name	Spesp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385180 CCDS:CCDS23263.1 GeneID:66712 MGI:1913962
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 product : sperm equatorial segment protein 1 protein_id : NP_079997.1

name	Anp32a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254600 GeneID:11737 MGI:108447
definition	GO_component : GO:0016363 - nuclear matrix [Evidence IPI]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : leucine rich acidic nuclear protein; acidic nuclear phosphoprotein 32; vacidic (leucine-rich) nuclear phosphoprotein 32 family, member A product : acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein_id : NP_033802.2

name	Coro2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202047 CCDS:CCDS23264.1 GeneID:235431 MGI:2444283
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] codon_start : 1 note : KIAA0925-like; E130012P22 product : coronin, actin binding protein, 2B protein_id : NP_780693.1

name	Itga11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254395 CCDS:CCDS23265.1 GeneID:319480 MGI:2442114
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006929 - substrate-bound cell migration [Evidence IMP] codon_start : 1 exception : mismatches in translation note : integrin a11 product : integrin alpha 11 protein_id : NP_795896.3

name	Fem1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753840 CCDS:CCDS23266.1 GeneID:14155 MGI:1335087
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : feminization 1 homolog b protein_id : NP_034323.1

name	Cln6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677520 CCDS:CCDS23267.1 GeneID:76524 MGI:2159324
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0031987 - locomotion during locomotory behavior [Evidence IMP]; GO:0007040 - lysosome organization and biogenesis [Evidence IMP]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : neuronal ceroid lipofuscinosis product : ceroid-lipofuscinosis, neuronal 6 protein_id : NP_001028347.1

name	Calml4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956268 GeneID:75600 MGI:1922850
definition	codon_start : 1 product : calmodulin-like 4 protein_id : NP_612177.1

name	Pias1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543478 GeneID:56469 MGI:1913125
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003714 - transcription corepressor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007259 - JAK-STAT cascade [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : DEAD/H (Asp-Glu-Ala-Asp/His) box binding protein 1 product : protein inhibitor of activated STAT 1 protein_id : NP_062637.2

name	Lbxcor1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369603 CCDS:CCDS23268.1 GeneID:207667 MGI:2443473
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003714 - transcription corepressor activity [Evidence IDA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transcriptional corepressor Corl1 protein_id : NP_766034.1

name	Map2k5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754624 CCDS:CCDS23269.1 GeneID:23938 MGI:1346345
definition	GO_component : GO:0005819 - spindle [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007507 - heart development [Evidence IMP]; GO:0000165 - MAPKKK cascade [Evidence IMP] codon_start : 1 note : MAPK/ERK kinese 5; MAPK/ERK kinase 5 product : mitogen activated protein kinase kinase 5 protein_id : NP_035970.1

name	2300009A05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930191 GeneID:69478 MGI:1916728
definition	codon_start : 1 product : hypothetical protein LOC69478 isoform 3 protein_id : XP_903630.1

name	2300009A05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63589667 GeneID:69478 MGI:1916728
definition	codon_start : 1 product : hypothetical protein LOC69478 isoform 1 protein_id : XP_204313.2

name	Iqch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260024 GeneID:78250 MGI:1925500
definition	codon_start : 1 product : IQ motif containing H protein_id : XP_001475958.1

name	Iqch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20890410 GeneID:78250 MGI:1925500
definition	codon_start : 1 product : IQ motif containing H isoform 1 protein_id : XP_134960.1

name	2310007F21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625673 CCDS:CCDS23271.1 GeneID:66939 MGI:1914189
definition	GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC66939 protein_id : NP_080133.1

name	Smad3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543222 CCDS:CCDS23272.1 GeneID:17127 MGI:1201674
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003690 - double-stranded DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence IPI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0001707 - mesoderm formation [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IEA]; GO:0048340 - paraxial mesoderm morphogenesis [Evidence IMP]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0051098 - regulation of binding [Evidence IDA]; GO:0050678 - regulation of epithelial cell proliferation [Evidence IMP]; GO:0050776 - regulation of immune response [Evidence IMP]; GO:0016202 - regulation of striated muscle development [Evidence IDA]; GO:0017015 - regulation of transforming growth factor beta receptor signaling pathway [Evidence IDA]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0042110 - T cell activation [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Smad 3 product : MAD homolog 3 protein_id : NP_058049.2

name	Smad6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560673 CCDS:CCDS23273.1 GeneID:17130 MGI:1336883
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Smad 6 product : MAD homolog 6 protein_id : NP_032568.2

name	2600006L11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260002 GeneID:76814 MGI:1924064
definition	codon_start : 1 product : hypothetical protein LOC76814 protein_id : XP_001474039.1

name	Lctl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003882 CCDS:CCDS23274.1 GeneID:235435 MGI:2183549
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA] codon_start : 1 note : Klotho-LPH related product : lactase-like protein_id : NP_665834.1

name	Zwilch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532956 CCDS:CCDS23275.1 GeneID:68014 MGI:1915264
definition	GO_component : GO:0000776 - kinetochore [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Zwilch protein_id : NP_080783.2

name	Rpl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794450 GeneID:67891 MGI:1915141
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : ribosomal protein L4 protein_id : NP_077174.1

name	LOC100039897 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039897
definition	number : 1 pseudo : _no_value

name	EG665478 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665478
definition	number : 1 pseudo : _no_value

name	LOC100039976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039976
definition	number : 5 pseudo : _no_value

name	LOC100039976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039976
definition	number : 4 pseudo : _no_value

name	LOC100039976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039976
definition	number : 3 pseudo : _no_value

name	LOC100039976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039976
definition	number : 2 pseudo : _no_value

name	LOC100039976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039976
definition	number : 1 pseudo : _no_value

name	LOC100040009 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040009
definition	number : 3 pseudo : _no_value

name	LOC100040009 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040009
definition	number : 2 pseudo : _no_value

name	LOC100040009 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040009
definition	number : 1 pseudo : _no_value

name	LOC621763 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260025 GeneID:621763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 3 Proteins product : similar to DnaJ (Hsp40) homolog, subfamily C, member 17 pseudo : _no_value transcript_id : XR_032501.1

clone name	MSMg01-432D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-408B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440C10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-393A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-345C04.b	B6Ng01-345C04.g
ACC	GA127432	GA127433
length	1,170	1,159
definition	B6Ng01-345C04.b	B6Ng01-345C04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(63,022,697 - 63,023,864)	(62,871,083 - 62,872,209)
sequence	gaattcctctgtggtataaatgttgggtctctgtggaaggacagtcaata ggagggtcacccagaaggagctgtgtaaagaatccttgagatcagctcac ctttgatgtcttgtgaaagctttgtcacggtcaggcagaaagagaaagct ctaggttcccaggtgcgatttccaagctgtctggtaagttgtggctaacc cctcacctagtacaccgagaagccagtctcctcctcctccggcttcatgg acactcagcattccataaggtggatatgctatgtttagttaaccagaact ctgtctcagaacatgtcagctatttctgtgttttttgctattaagaccat gactggtgaggtgactcagtgggtacaagtgactgttgtcaggccagaca acctgagttcagttcccggtacccacgtggtataaaaagagaaccagccc cagcagggtgtcctctgagctcaatacccatgccatggcacatacacata ttcatatatacatgcttgtatacacacacacatttaattttttaagacaa tgactttatgtacatttttaagcctggatgtgtgaagccagtttttctat ctcatttgatataaattatcagcctttaatctttgctatctgatcagtgg taaatatgtttgttgtttaattggcatttcttttattaagtatgagaata aatgagttggctttttgcttgtttgtttgtttgagtgttcgactagattt ttgttattgtttgtttgtttgtttgttttacatcgtttgccacttctttg ctgggctctgttactttctttcgcacttactgaattccttggcatcccag actgagaaatgagaaatggatacacagctgcgaaaggcaccttcccaccc ctgtaagtctgtgtcccttttaggcagttttcatacaccttgctgagcag cactgaggctgcgtagccgctagctggggtacacagccacacagtcctct gcctcttgttcagtgtctaacttcctttttgtcaaaaagcagccttggaa attggcaagcaggagcagggctgacttgcttaagcctgcctgtagaactc agaataatttaatttttcctattgattaggcctggaagacctgggtggat tttctcacaaacactgtcct	gaattcaggttatcaagcttgcagggcagacacttacccagtgaactctt tccgcagccgaagagattttttacatgccatgccatgtatgcatacataa aatcaagcaattgataaatgtgaaaaatgaagattagtttggtagtttgt ttttgttttgtttttggttttttgtttttgtttttttcgagacagggttt ctctgtatagccctggctgtcctggaactcactctgtagaccaggctggc ctcgaactcagaaatccacctgcctctgcctcccaagtgctgggattaaa ggtgtgcgccaccaccaccgcccggctgaagattagttttaaaaatatgt attgttagtgtgatgtatatggtgcacatatatgggtggggtactacagg tcttccttaggctaaggactaaggcaagtgggaagtgctgtctctagttg catatgtaacagaggatggcctaggtggccatcaatgggagcagaggccc cagtacaggggaatgccagggccaagaagcaggagtgggtgggttaggga gcagggttggggactttcgggatagcatttgaaatgtaaatgaagaaaat atctaataaaaattatataacaaaaaaagtgggaagtgtttgttcatgtg gcctgaaaactatgcctactatctgccctgttcccatggataccccaggt aggggctgctagcatcttcatttgacagaggaggatgaggcagacggagc tcggaagtgttcatgacttaccaaagtcccatctttgtgaccaaatttct acaactggggatttgaacccaggggctgtgttgactagttggtaaattct gatcagatgacatctgagtagattctagaattcatagaaggaagaaacac tacctcagtccttctctacacatttcctcgacatgggccctgtgtgtgca agtggaatgaaaatcctttgtgatcagttgggctgaccaagtaccagcaa aatcaaatttaaaatttgtcttaccttatctgtttccagtaatgaaccta cccccctcaatccgaatgataaaaaccaaaaacgaaacccaaacaaacaa ccaaccccctttcccccctcacctccgcattctatatatgaaattctcaa ttgtctgga
quality values	Open. Hide. 46 31 22 35 62 62 62 62 62 62 62 54 49 49 56 51 42 56 62 62 47 49 62 62 62 62 62 62 62 62 34 34 34 23 24 27 24 28 23 38 28 40 56 56 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 59 51 43 38 43 49 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 58 58 58 58 54 58 58 58 58 54 58 58 58 54 58 54 58 58 58 58 48 54 58 58 58 49 58 58 58 42 47 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 52 54 58 58 58 58 53 53 58 58 58 58 58 50 58 53 49 49 47 51 58 58 51 58 58 51 58 58 58 58 58 51 51 51 58 58 58 58 58 58 58 52 51 58 58 58 58 50 58 54 58 53 58 58 53 53 58 48 50 53 53 58 53 58 58 58 51 51 58 50 58 50 50 58 50 58 58 46 50 52 53 58 54 52 50 58 58 50 52 53 53 53 51 50 52 49 39 52 58 37 58 47 50 49 58 54 49 58 58 34 53 53 58 54 52 53 58 58 58 58 49 41 52 52 54 52 54 54 49 30 54 39 53 37 54 51 52 54 32 51 54 49 40 52 37 49 32 53 42 37 39 31 54 54 54 54 51 40 49 34 34 42 54 40 54 47 54 39 54 35 51 42 54 38 34 37 54 52 53 32 54 54 32 37 42 37 51 42 31 47 54 47 42 36 42 32 33 34 46 52 40 49 34 45 32 35 40 33 33 33 41 33 32 47 37 41 21 31 34 49 47 40 47 49 42 30 29 31 31 36 31 45 29 31 33 38 42 35 41 31 26 35 24 32 38 51 31 31 37 21 33 36 31 21 28 16 31 42 37 18 46 47 21 31 32 35 19 46 47 31 18 46 26 38 31 27 31 24 41 33 37 31 33 34 42 13 23 46 9 28 23 24 31 32 32 39 18 31 46 29 20 31 46 46 37 19 37 31 27 29 35 32 36 32 41 27 28 25 31 48 30 31 44 43 22 32 13 37 32 28 20 38 48 48 20 24 31 36 33 33 25 31 27 22 28 31 22 20 21 31 13 31 32 24 28 32 32 33 26 17 5 17 17 32 31 43 25 25 29 14 13 8 16 30 32 34 32 32 32 30 48 48 28 7 6 9 12 18 11 8 25 12 13 21 13 21 21 19 26 21 20 9 5 11 21 21 6 6 8 30 18 9 15 11 27 24 7 6 21 14 14 16 13 13 19 18 21 13 9 18 40 47 29 15 15 10 14 25 40 40 30 25 16 19 22 11 19 16 31 14 8 9 24 40 17 9 21 9 15 19 8 14 10 2 8 7 9 24 8 21 3 5 18 24 15 23 7 13 6 11 6 14 16 17 12 9 8 14 13 5 16 6 11 9 8 10 7 14 10 20 6 3 3 8 6 9 3 17 4 6 11 21 28 10 10 9 7 28 30 17 6 6 13 5 2 3 3 2 1 5 3 2 1 4 14 7 9 24 9 13 7 6 22 5 4 1 4 7 6 4 4 3 2 7 17 30 18 4 10 7 7 8 13 15 4 5 5 17 8 7 4 16 14 5	Open. Hide. 46 35 51 42 62 47 41 62 62 42 35 26 31 22 14 17 24 24 28 28 49 24 34 43 62 59 59 62 62 59 59 62 59 62 62 62 62 62 59 59 59 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 51 56 54 34 42 48 46 59 62 54 54 62 62 62 62 54 62 62 59 62 62 62 59 59 62 59 62 59 59 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 49 42 62 62 62 62 62 62 54 62 62 62 62 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 31 35 43 62 46 62 56 56 62 56 62 56 62 62 62 62 62 62 43 62 48 62 52 62 62 62 62 41 38 62 52 62 62 54 62 62 48 62 54 43 62 62 62 62 62 62 62 54 62 54 62 49 58 58 54 52 54 54 49 58 58 39 58 58 58 54 54 54 41 54 52 54 50 52 54 54 54 52 52 52 54 39 44 46 52 54 54 54 54 52 58 54 53 54 52 52 58 58 45 43 58 44 49 46 41 46 46 54 46 52 54 52 52 52 54 54 46 26 54 46 49 37 39 27 32 29 25 18 58 52 52 39 47 24 40 58 49 50 48 49 47 35 46 32 42 50 34 17 40 40 34 40 50 47 50 43 22 51 50 49 46 58 58 33 49 50 52 53 51 48 44 34 37 46 39 35 50 52 52 48 50 43 40 36 50 20 54 46 51 32 30 50 54 26 22 29 26 31 50 50 37 28 43 58 40 40 17 46 44 50 42 42 50 39 43 33 33 50 27 35 26 17 58 26 31 20 58 39 42 50 39 38 16 32 13 51 29 10 49 30 20 50 43 16 44 28 30 11 44 28 26 44 35 24 18 10 16 33 38 38 41 45 31 51 23 9 18 23 49 52 28 14 39 37 17 16 37 29 23 41 37 45 45 39 29 30 42 34 11 54 13 39 39 42 33 17 40 21 26 27 8 51 19 16 11 24 40 18 28 38 26 29 39 27 13 25 29 36 37 33 19 25 31 40 41 18 13 23 19 21 25 39 32 13 19 10 6 14 18 14 26 30 31 16 45 40 33 10 29 47 26 17 51 31 19 29 40 39 29 26 15 30 25 28 27 21 12 30 21 18 10 36 6 9 15 16 18 23 11 31 23 14 10 26 11 30 14 23 6 22 20 16 9 8 9 17 27 31 26 36 30 31 25 15 28 21 21 12 10 14 17 14 6 6 21 23 28 37 16 25 16 14 24 18 6 11 17 31 42 46 9 6 7 15 21 32 13 6 17 31 27 17 6 27 23 23 30 15 19 14 16 5 15 11 6 6 9 6 16 10 8 16 14 11 36 36 31 27 16 16 9 20 20 8 8 11 35 26 20 33 22 22 11 17 11 31 14 6 25 21 21 10 13 18 21 23 9 24 5 10 9 18 31 25 44 36 11 18 17 7 13 17 29 29 11 9 9 11 15 14 38 22 18 16 17 17 6 9 6 13 31 16 8 22 30 21 13 6 18 14 10 31 12 18 9 29 9 8 4 12 13 24 10 10 14 7 39 32 32 29 21 12 17 12 14 7 23 10 5 8 12 20 14 9 5 4 37 15 22 12 3 8 8 9 20 18 15 9 3 4 16 7 7 12 11 11 23 5 16 3 20 8 12 4 3 8 4 6 3 6 21 16 28 23 7 8 3 5 27 28 28 15 24 7 12 10 15 6 8 5 6 6 16 14 28 18 5 3 1 3 4 4 7 6 7 14 10 13 5 9 5 8 4 7 6 8 3 2 1 2 5 16 12 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_63022697_63023864
seq2: B6Ng01-345C04.b_46_1215 (reverse)

seq1  AGGACAGTGT---TGAGAAAA-CCACACA-GTCTTCCCAGGCTTAAAACA  45
      ||||||||||   |||||||| |||| || ||||| |||||| | || ||
seq2  AGGACAGTGTTTGTGAGAAAATCCACCCAGGTCTT-CCAGGCCT-AATCA  48

seq1  AATAGAGAAAATAAATATTCCTGATGTCTACAGGCAGCTTTAAAGCAAGT  95
      |   || ||| |||||  | ||||  |||||||||||  || ||||||| 
seq2  ATAGGAAAAATTAAATTATTCTGAGTTCTACAGGCAGGCTT-AAGCAAG-  96

seq1  TCAGCCCCTGCT-CTGCCTTGCAATTTCAAAGGCTGCTTTTTGAC-AAAA  143
      |||| ||||||| |||| |  ||||||| |||||||||||||||| ||||
seq2  TCAG-CCCTGCTCCTGCTTGCCAATTTCCAAGGCTGCTTTTTGACAAAAA  145

seq1  GGAAGTTAGACACTGAACAAAGAGGCAGAGGACTGTGTGGCTGTGTACCC  193
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAAGTTAGACACTGAAC-AAGAGGCAGAGGACTGTGTGGCTGTGTACCC  194

seq1  CAGCTAGCGGCTACGCAGCCTCAGTGCTGCTCAGCAAGGTGTATGAAAAC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGCGGCTACGCAGCCTCAGTGCTGCTCAGCAAGGTGTATGAAAAC  244

seq1  TGCCTAAAAGGGACACAGACTTACAGGGGTGGGAAGGTGCC-TTCGCAGC  292
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGCCTAAAAGGGACACAGACTTACAGGGGTGGGAAGGTGCCTTTCGCAGC  294

seq1  TGTGTATCCATTTCTCATTTCTCAGTCTGGGATGCCAAGGAATTCAGTAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATCCATTTCTCATTTCTCAGTCTGGGATGCCAAGGAATTCAGTAA  344

seq1  GTGCGAAAGAAAGTAACAGAGCCCAGCAAAGAAGTGGCAAACGATGTAAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGAAAGAAAGTAACAGAGCCCAGCAAAGAAGTGGCAAACGATGTAAA  394

seq1  ACAAACAAACAAACAAACAATAACAAAAATCTAGTCGAACACTCAAACAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACAATAACAAAAATCTAGTCGAACACTCAAACAA  444

seq1  ACAAACAAGCAAAAAGCCAACTCATTTATTCTCATACTTAATAAAAGAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGCAAAAAGCCAACTCATTTATTCTCATACTTAATAAAAGAAA  494

seq1  TGCCAATTAAACAACAAACATATTTACCACTGATCAGATAGCAAAGATTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATTAAACAACAAACATATTTACCACTGATCAGATAGCAAAGATTA  544

seq1  AAGGCTGATAATTTATATCAAATGAGATAGAAAAACTGGCTTCACACATC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGATAATTTATATCAAATGAGATAGAAAAACTGGCTTCACACATC  594

seq1  CAGGCTTAAAAATGTACATAAAGTCATTGTCTTAAAAAATTAAATGTGTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTAAAAATGTACATAAAGTCATTGTCTTAAAAAATTAAATGTGTG  644

seq1  TGTGTATACAAGCATGTATATATGAATATGTGTATGTGCCATGGCATGGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATACAAGCATGTATATATGAATATGTGTATGTGCCATGGCATGGG  694

seq1  TATTGAGCTCAGAGGACACCCTGCTGGGGCTGGTTCTCTTTTTATACCAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGCTCAGAGGACACCCTGCTGGGGCTGGTTCTCTTTTTATACCAC  744

seq1  GTGGGTACCGGGAACTGAACTCAGGTTGTCTGGCCTGACAACAGTCACTT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTACCGGGAACTGAACTCAGGTTGTCTGGCCTGACAACAGTCACTT  794

seq1  GTACCCACTGAGTCACCTCACCAGTCATGGTCTTAATAGCAAAAAACACA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCACTGAGTCACCTCACCAGTCATGGTCTTAATAGCAAAAAACACA  844

seq1  GAAATAGCTGACATGTTCTGAGACAGAGTTCTGGTTAACTAAACATAGCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCTGACATGTTCTGAGACAGAGTTCTGGTTAACTAAACATAGCA  894

seq1  TATCCACCTTATGGAATGCTGAGTGTCCATGAAGCCGGAGGAGGAGGAGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACCTTATGGAATGCTGAGTGTCCATGAAGCCGGAGGAGGAGGAGA  944

seq1  CTGGCTTCTCGGTGTACTAGGTGAGGGGTTAGCCACAACTTACCAGACAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCTCGGTGTACTAGGTGAGGGGTTAGCCACAACTTACCAGACAG  994

seq1  CTTGGAAATCGCACCTGGGAACCTAGAGCTTTCTCTTTCTGCCTGACCGT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAATCGCACCTGGGAACCTAGAGCTTTCTCTTTCTGCCTGACCGT  1044

seq1  GACAAAGCTTTCACAAGACATCAAAGGTGAGCTGATCTCAAGGATTCTTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGCTTTCACAAGACATCAAAGGTGAGCTGATCTCAAGGATTCTTT  1094

seq1  ACACAGCTCCTTCTGGGTGACCCTCCTATTGACTGTCCTTCCACAGAGAC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTCCTTCTGGGTGACCCTCCTATTGACTGTCCTTCCACAGAGAC  1144

seq1  CCAACATTTATACCACAGAGGAATTC  1168
      ||||||||||||||||||||||||||
seq2  CCAACATTTATACCACAGAGGAATTC  1170

seq1: chr9_62871083_62872209
seq2: B6Ng01-345C04.g_68_1226

seq1  GAATTCAGGTTATCAAGCTTGCAGGGCAGACACTTACCCAGTGAACTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTATCAAGCTTGCAGGGCAGACACTTACCCAGTGAACTCTT  50

seq1  TCCGCAGCCGAAGAGATTTTTTACATGCCATGCCATGTATGCATACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCAGCCGAAGAGATTTTTTACATGCCATGCCATGTATGCATACATAA  100

seq1  AATCAAGCAATTGATAAATGTGAAAAATGAAGATTAGTTTGGTAGTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGCAATTGATAAATGTGAAAAATGAAGATTAGTTTGGTAGTTTGT  150

seq1  TTTTGTTTTGTTTTTGGTTTTTTGTTTTTGTTTTTTTCGAGACAGGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTTGGTTTTTTGTTTTTGTTTTTTTCGAGACAGGGTTT  200

seq1  CTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGC  250

seq1  CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA  300

seq1  GGTGTGCGCCACCACCACCGCCCGGCTGAAGATTAGTTTTAAAAATATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCGCCACCACCACCGCCCGGCTGAAGATTAGTTTTAAAAATATGT  350

seq1  ATTGTTAGTGTGATGTATATGGTGCACATATATGGGTGGGGTACTACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAGTGTGATGTATATGGTGCACATATATGGGTGGGGTACTACAGG  400

seq1  TCTTCCTTAGGCTAAGGACTAAGGCAAGTGGGAAGTGCTGTCTCTAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTAGGCTAAGGACTAAGGCAAGTGGGAAGTGCTGTCTCTAGTTG  450

seq1  CATATGTAACAGAGGATGGCCTAGGTGGCCATCAATGGGAGCAGAGGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTAACAGAGGATGGCCTAGGTGGCCATCAATGGGAGCAGAGGCCC  500

seq1  CAGTACAGGGGAATGCCAGGGCCAAGAAGCAGGAGTGGGTGGGTTAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAGGGGAATGCCAGGGCCAAGAAGCAGGAGTGGGTGGGTTAGGGA  550

seq1  GCAGGGTTGGGGACTTTCGGGATAGCATTTGAAATGTAAATGAAGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTTGGGGACTTTCGGGATAGCATTTGAAATGTAAATGAAGAAAAT  600

seq1  ATCTAATAAAAATTATATAACAAAAAAAGTGGGAAGTGTTTGTTCATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATAAAAATTATATAACAAAAAAAGTGGGAAGTGTTTGTTCATGTG  650

seq1  GCCTGAAAACTATGCCTACTATCTGCCCTGTTCCCATGGATACCCCAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAAACTATGCCTACTATCTGCCCTGTTCCCATGGATACCCCAGGT  700

seq1  AGGGGCTGCTAGCATCTTCATTTGACAGAGGAGGATGAGGCAGACGGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTGCTAGCATCTTCATTTGACAGAGGAGGATGAGGCAGACGGAGC  750

seq1  TCGGAAGTGTTCATGACTTACCAAAGTCCCATC-TTGTGACCAAA-TTCT  798
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  TCGGAAGTGTTCATGACTTACCAAAGTCCCATCTTTGTGACCAAATTTCT  800

seq1  ACAACT-GGGATTTGAACCCA-GGGCTGTG-TGACTAGTTGGTAAATTCT  845
      |||||| |||||||||||||| |||||||| |||||||||||||||||||
seq2  ACAACTGGGGATTTGAACCCAGGGGCTGTGTTGACTAGTTGGTAAATTCT  850

seq1  GATCAGATGACATCTGAGTAGATTCTAG-ATTCATAGAAGGAAGAAACAC  894
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GATCAGATGACATCTGAGTAGATTCTAGAATTCATAGAAGGAAGAAACAC  900

seq1  TACCTCAG-CCTTCTCTACACATTT-CTCGACATGGG-CCTGTGTGTGC-  940
      |||||||| |||||||||||||||| ||||||||||| ||||||||||| 
seq2  TACCTCAGTCCTTCTCTACACATTTCCTCGACATGGGCCCTGTGTGTGCA  950

seq1  AGTGG-ATGAAAAT-CTTTGTGATCAGTT-GGTTGA-CAAGTAACAGCAA  986
      ||||| |||||||| |||||||||||||| || ||| |||||| ||||||
seq2  AGTGGAATGAAAATCCTTTGTGATCAGTTGGGCTGACCAAGTACCAGCAA  1000

seq1  AATCAAATTTAGAATTTGTCTTA-CTTATCTG-TTCCAG--ATAGACCTA  1032
      ||||||||||| ||||||||||| |||||||| ||||||  ||  |||||
seq2  AATCAAATTTAAAATTTGTCTTACCTTATCTGTTTCCAGTAATGAACCTA  1050

seq1  -CCCCCTCAA-CCAAATGAGAAAAAC--AAAACAAAACC--AACCAACAA  1076
       ||||||||| || ||||| ||||||  ||||| |||||  ||| |||||
seq2  CCCCCCTCAATCCGAATGATAAAAACCAAAAACGAAACCCAAACAAACAA  1100

seq1  CAAACCCC--TTCCCCCCACTCC----CATTCTTATAAAT-AAAT--TCA  1117
      | ||||||  |||||||| | ||    ||||| |||| || ||||  |||
seq2  CCAACCCCCTTTCCCCCCTCACCTCCGCATTC-TATATATGAAATTCTCA  1149

seq1  ATTGTCTGGA  1127
      ||||||||||
seq2  ATTGTCTGGA  1159

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information