MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-345I17
Chromosome	9 (Build37)	10 (Build37)
Map Location	66,467,401 - 66,467,941	65,497,371 - 65,497,653
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Rbpms2, Oaz2, Zfp609, LOC100041180, Trip4, 2810417H13Rik, Csnk1g1, Ppib, Snx22, Snx1, 5730536A07Rik, Dapk2, Herc1, Fbxl22, Usp3
Downstream gene	Car12, Aph1b, LOC623488, Aph1c, Rab8b, Rps27l, Lactb, Tpm1, Tln2, LOC100041390, LOC100040253
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rbpms2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71973 MGI:1919223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Oaz2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18247 MGI:109492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp609 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214812 MGI:2674092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041180 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Trip4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56404 MGI:1928469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810417H13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68026 MGI:1915276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csnk1g1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214897 MGI:2660884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppib (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19035 MGI:97750
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snx22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382083 MGI:2685966
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56440 MGI:1928395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730536A07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68250 MGI:1915500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dapk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13143 MGI:1341297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Herc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235439 MGI:2384589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 224 ESTs, 6 Proteins

name	Fbxl22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74165 MGI:1921415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235441 MGI:2152450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Car12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76459 MGI:1923709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aph1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208117 MGI:3522097
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623488 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623488
definition	note : protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene pseudo : _no_value

name	Aph1c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68318 MGI:1915568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235442 MGI:2442982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rps27l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67941 MGI:1915191
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lactb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80907 MGI:1933395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22003 MGI:98809
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tln2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70549 MGI:1917799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041390 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Rbpms2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130420 GeneID:71973 MGI:1919223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding protein with multiple splicing 2 transcript_id : NM_028030.3

name	Oaz2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37596299 GeneID:18247 MGI:109492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ornithine decarboxylase antizyme 2 transcript_id : NM_010952.2

name	Zfp609 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369755 GeneID:214812 MGI:2674092
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 609 transcript_id : NM_172536.1

name	Trip4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71773828 GeneID:56404 MGI:1928469
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid hormone receptor interactor 4 transcript_id : NM_019797.3

name	2810417H13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71773931 GeneID:68026 MGI:1915276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810417H13 gene transcript_id : NM_026515.2

name	Csnk1g1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71773562 GeneID:214897 MGI:2660884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : casein kinase 1, gamma 1 transcript_id : NM_173185.2

name	Ppib (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71774132 GeneID:19035 MGI:97750
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase B transcript_id : NM_011149.2

name	Snx22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131181 GeneID:382083 MGI:2685966
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 22 transcript_id : NM_001025612.2

name	Snx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043943 GeneID:56440 MGI:1928395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 1 transcript_id : NM_019727.2

name	5730536A07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71773979 GeneID:68250 MGI:1915500
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730536A07 gene transcript_id : NM_026635.3

name	Dapk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328166 GeneID:13143 MGI:1341297
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : death-associated kinase 2 transcript_id : NM_010019.2

name	Herc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260053 GeneID:235439 MGI:2384589
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 224 ESTs, 6 Proteins product : hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 transcript_id : XM_001477062.1

name	Fbxl22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349543 GeneID:74165 MGI:1921415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and leucine-rich repeat protein 22 transcript_id : NM_175206.3

name	Usp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361676 GeneID:235441 MGI:2152450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 3 transcript_id : NM_144937.3

name	Car12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560837 GeneID:76459 MGI:1923709
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonic anyhydrase 12 transcript_id : NM_178396.3

name	Aph1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372127 GeneID:208117 MGI:3522097
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anterior pharynx defective 1b homolog (C. elegans) transcript_id : NM_177583.3

name	Aph1c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129861 GeneID:68318 MGI:1915568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anterior pharynx defective 1c homolog (C. elegans) transcript_id : NM_026674.3

name	Rab8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254271 GeneID:235442 MGI:2442982
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB8B, member RAS oncogene family transcript_id : NM_173413.2

name	Rps27l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803225 GeneID:67941 MGI:1915191
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S27-like transcript_id : NM_026467.2

name	Lactb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507665 GeneID:80907 MGI:1933395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactamase, beta transcript_id : NM_030717.1

name	Tpm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361543 GeneID:22003 MGI:98809
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tropomyosin 1, alpha transcript_id : NM_024427.3

name	Tln2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486956 GeneID:70549 MGI:1917799
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : talin 2 transcript_id : NM_001081242.1

name	LOC100041390 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260055 GeneID:100041390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041390 transcript_id : XM_001477528.1

name	LOC100040253 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260006 GeneID:100040253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040253 transcript_id : XM_001474360.1

name	Rbpms2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980694 CCDS:CCDS23296.1 GeneID:71973 MGI:1919223
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding protein with multiple splicing 2 protein_id : NP_082306.2

name	Oaz2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11136624 GeneID:18247 MGI:109492
definition	GO_function : GO:0004857 - enzyme inhibitor activity [Evidence IEA]; GO:0008073 - ornithine decarboxylase inhibitor activity [Evidence TAS] GO_process : GO:0006595 - polyamine metabolism [Evidence TAS] codon_start : 1 note : protein translation dependent on +1 ribosomal frameshift; antizyme 2 product : ornithine decarboxylase antizyme 2 protein_id : NP_035082.1 ribosomal_slippage : _no_value

name	Zfp609 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369756 CCDS:CCDS23297.1 GeneID:214812 MGI:2674092
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 609 protein_id : NP_766124.1

name	Trip4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71773829 CCDS:CCDS23298.1 GeneID:56404 MGI:1928469
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcription coactivator ASC-1 product : thyroid hormone receptor interactor 4 protein_id : NP_062771.2

name	2810417H13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71773932 CCDS:CCDS23299.1 GeneID:68026 MGI:1915276
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68026 protein_id : NP_080791.2

name	Csnk1g1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71773563 CCDS:CCDS23300.1 GeneID:214897 MGI:2660884
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : casein kinase I, gamma 1 product : casein kinase 1, gamma 1 protein_id : NP_775277.2

name	Ppib (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71774133 CCDS:CCDS23301.1 GeneID:19035 MGI:97750
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0042277 - peptide binding [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : cyclophilin B product : peptidylprolyl isomerase B protein_id : NP_035279.2

name	Snx22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71774067 GeneID:382083 MGI:2685966
definition	codon_start : 1 product : sorting nexin 22 protein_id : NP_001020783.1

name	Snx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71043944 GeneID:56440 MGI:1928395
definition	GO_component : GO:0005768 - endosome [Evidence IDA] GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : sorting nexin 1 protein_id : NP_062701.2

name	5730536A07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386128 CCDS:CCDS23302.1 GeneID:68250 MGI:1915500
definition	codon_start : 1 product : family with sequence similarity 96, member A protein_id : NP_080911.1

name	Dapk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328167 CCDS:CCDS23303.1 GeneID:13143 MGI:1341297
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0004685 - calcium- and calmodulin-dependent protein kinase activity [Evidence ISS]; GO:0005516 - calmodulin binding [Evidence ISS] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence ISS]; GO:0007243 - protein kinase cascade [Evidence ISS] codon_start : 1 product : death-associated kinase 2 protein_id : NP_034149.2

name	Herc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260054 GeneID:235439 MGI:2384589
definition	codon_start : 1 product : hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 protein_id : XP_001477112.1

name	Fbxl22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29171324 CCDS:CCDS23304.1 GeneID:74165 MGI:1921415
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : F-box and leucine-rich repeat protein 22 protein_id : NP_780415.1

name	Usp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450103 CCDS:CCDS23305.1 GeneID:235441 MGI:2152450
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 3 protein_id : NP_659186.1

name	Car12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541884 CCDS:CCDS23306.1 GeneID:76459 MGI:1923709
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006730 - one-carbon compound metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : CA XII product : carbonic anyhydrase 12 protein_id : NP_848483.2

name	Aph1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243936 CCDS:CCDS23307.1 GeneID:208117 MGI:3522097
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004175 - endopeptidase activity [Evidence IGI]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007219 - Notch signaling pathway [Evidence IEA]; GO:0043085 - positive regulation of enzyme activity [Evidence IEA]; GO:0016485 - protein processing [Evidence IEA] codon_start : 1 note : APH1B homolog; anterior pharynx defective 1c homolog product : anterior pharynx defective 1b homolog protein_id : NP_808251.1

name	Aph1c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21492616 CCDS:CCDS23308.1 GeneID:68318 MGI:1915568
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004175 - endopeptidase activity [Evidence IGI]; GO:0008233 - peptidase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0001656 - metanephros development [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IEA]; GO:0043085 - positive regulation of enzyme activity [Evidence IEA]; GO:0016485 - protein processing [Evidence ISS] [Evidence IGI] codon_start : 1 note : anterior pharynx defective 1b product : anterior pharynx defective 1c homolog protein_id : NP_080950.1

name	Rab8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734154 CCDS:CCDS23309.1 GeneID:235442 MGI:2442982
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : RAB44, member RAS oncogene family product : RAB8B, member RAS oncogene family protein_id : NP_775589.1

name	Rps27l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385958 GeneID:67941 MGI:1915191
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ribosomal protein S27-like protein_id : NP_080743.1

name	Lactb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507666 GeneID:80907 MGI:1933395
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008800 - beta-lactamase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0030655 - beta-lactam antibiotic catabolism [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA] codon_start : 1 note : serine beta lactamase-like protein; mitochondrial ribosomal protein L56 product : lactamase, beta protein_id : NP_109642.1

name	Tpm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560030 CCDS:CCDS23311.1 GeneID:22003 MGI:98809
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005862 - muscle thin filament tropomyosin [Evidence TAS] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence TAS] GO_process : GO:0006936 - muscle contraction [Evidence IEA] codon_start : 1 note : alpha tropomyosin product : tropomyosin 1, alpha protein_id : NP_077745.2

name	Tln2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486957 GeneID:70549 MGI:1917799
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0045202 - synapse [Evidence ISS] GO_function : GO:0003779 - actin binding [Evidence IEA] [Evidence ISS]; GO:0000062 - acyl-CoA binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence ISS] [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence ISS] codon_start : 1 product : talin 2 protein_id : NP_001074711.1

name	LOC100041390 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260056 GeneID:100041390
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477578.1

name	LOC100040253 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260007 GeneID:100040253
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474410.1

name	LOC100041180 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041180
definition	number : 1 pseudo : _no_value

clone name	MSMg01-316J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-449P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-134H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231P16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-435J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488J20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-507M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-069P17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-183L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259O01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-345I17.b	B6Ng01-345I17.g
ACC	GA127706	GA127707
length	541	604
definition	B6Ng01-345I17.b	B6Ng01-345I17.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(66,467,401 - 66,467,941)	(65,497,371 - 65,497,653)
sequence	gaattcaatttctgagactcaagtagcagaaggagagaagggagtcatgc cattgtctctgacttctgcatgtgcaccatggcaggaatgtgctcatata catataaatacatgcaagatacataaatgagtattttacaatatttttaa gggtctggggacatagctcagcagtaggctgcctgcctagcatgtgcaaa tccctaccttctgtccttagtactggggggtggggggagaaaagattaaa agaataattaaccgggacagcagctgaataagagcactttggaccatgtg atgctggttggaattgagggaggggaccacctccctggccctcatgatga gacctctgagagtcacaggagaaagagaagttacaccagacaggctgggc tattggcagttgctctcagggaagttggggagcgcccgctcctctgtgtg tgttcttgaacatgtgtatacctgtactttggtgtatgtgcttgtatgtg cctgtgtgtatatatgtgtatgtgtgtatgtatgtgtctgt	gaattcctggaaagaagctgtgtagagcaagactgacaaactgattagaa ctgcaggaatacagcagggttggaatgttagatcccgggcccaaggaacc ttatctttgcctagatttagcagtttgaatagccattccttacctatctc tgcgtcagagataacatccaatggctgatagactgaaagaaaaacctttg gagtctcttaacttagcagacccgtagctcccaccagctcaaaagctaag aatgtcaccagctagtatctagaggctataggggagtatcccccatcttg ctgtaagtagcatttggatgttcccacctaagtatttttaaattgtctag atttatggctttctttgttctgctattgtaaaacttcatgaaactacttc caagttgagaacacagaacctggggtaacctggggaacctatctccatgt ttcctgggtcttggtcactcaaatttagctccagaataaactcttttact cattttgaggtgaaagctgtgttttgttttgggtgtgtgtgtgtatgtca gtgtgtgtgtgtgcgagagatgtgccttaattcccccatgtggttatttt tcta
quality values	Open. Hide. 58 34 21 32 58 31 25 62 54 62 62 62 49 62 62 62 47 42 62 47 62 62 62 62 62 62 62 62 62 62 62 34 51 29 19 24 19 28 45 41 62 49 59 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 59 59 59 62 62 54 42 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 62 62 62 62 62 59 59 62 62 62 62 62 59 62 59 59 59 62 62 59 59 59 59 62 59 62 59 59 62 59 56 59 51 50 59 59 59 59 62 62 62 62 59 62 59 62 59 59 62 62 62 62 62 54 62 62 62 62 62 62 56 59 59 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 54 62 59 59 62 62 56 59 59 59 59 59 59 59 62 62 62 62 62 56 46 46 49 49 56 43 59 59 59 62 59 59 59 59 49 59 59 59 59 59 59 59 51 62 59 49 59 56 51 51 59 50 50 50 34 43 43 43 59 49 51 51 43 34 59 50 46 46 59 50 59 59 56 34 32 46 51 56 51 46 34 34 37 30 43 43 50 49 49 51 43 49 43 27 59 46 46 50 34 43 43 51 56 56 56 59 43 49 34 43 50 56 49 56 49 51 51 49 49 49 49 39 49 39 49 50 51 43 38 46 39 50 50 43 28 32 54 49 56 46 46 36 39 49 49 51 43 50 43 26 39 51 45 39 30 34 27 28 51 39 43 43 39 24 30 41 24 20 36 23 39 38 38 45 41 39 51 51 59 34 43 34 41 45 13 24 18 7 12 13 25 20 39 25 22 41 30 18 39 30 29 10 13 14 14 15 17 14 17 12 12 10 10 9 15 17	Open. Hide. 62 47 56 47 62 62 62 62 62 62 24 22 22 21 21 21 20 21 45 50 62 62 59 62 59 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 56 62 59 59 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 49 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 49 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 56 56 56 56 56 62 62 62 62 56 51 56 56 56 56 56 62 62 62 62 62 62 62 62 56 62 62 56 56 56 56 56 56 62 62 62 62 62 49 62 47 62 62 62 62 62 62 56 33 22 23 12 19 24 28 9 9 7 7 9 9 9 6 7 7 9 32 20 32 28 40 12 17 13 7 6 7 9 9 9 9 8 12 18 9 15 11 23 10 7 7 7 8 7 8 8 7 7 8 9 7 7 9 7 7 10 7 8 7 10 8 9 13 9 9 9 12 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_66467401_66467941
seq2: B6Ng01-345I17.b_47_587

seq1  GAATTCAATTTCTGAGACTCAAGTAGCAGAAGGAGAGAAGGGAGTCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTCTGAGACTCAAGTAGCAGAAGGAGAGAAGGGAGTCATGC  50

seq1  CATTGTCTCTGACTTCTGCATGTGCACCATGGCAGGAATGTGCTCATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCTCTGACTTCTGCATGTGCACCATGGCAGGAATGTGCTCATATA  100

seq1  CATATAAATACATGCAAGATACATAAATGAGTATTTTACAATATTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATACATGCAAGATACATAAATGAGTATTTTACAATATTTTTAA  150

seq1  GGGTCTGGGGACATAGCTCAGCAGTAGGCTGCCTGCCTAGCATGTGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGGGGACATAGCTCAGCAGTAGGCTGCCTGCCTAGCATGTGCAAA  200

seq1  TCCCTACCTTCTGTCCTTAGTACTGGGGGGTGGGGGGAGAAAAGATTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACCTTCTGTCCTTAGTACTGGGGGGTGGGGGGAGAAAAGATTAAA  250

seq1  AGAATAATTAACCGGGACAGCAGCTGAATAAGAGCACTTTGGACCATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATTAACCGGGACAGCAGCTGAATAAGAGCACTTTGGACCATGTG  300

seq1  ATGCTGGTTGGAATTGAGGGAGGGGACCACCTCCCTGGCCCTCATGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTTGGAATTGAGGGAGGGGACCACCTCCCTGGCCCTCATGATGA  350

seq1  GACCTCTGAGAGTCACAGGAGAAAGAGAAGTTACACCAGACAGGCTGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTGAGAGTCACAGGAGAAAGAGAAGTTACACCAGACAGGCTGGGC  400

seq1  TATTGGCAGTTGCTCTCAGGGAAGTTGGGGAGCGCCCGCTCCTCTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCAGTTGCTCTCAGGGAAGTTGGGGAGCGCCCGCTCCTCTGTGTG  450

seq1  TGTTCTTGAACATGTGTATACCTGTACTTTGGTGTATGTGCTTGTATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGAACATGTGTATACCTGTACTTTGGTGTATGTGCTTGTATGTG  500

seq1  CCTGTGTGTATATATGTGTATGTGTGTATGTATGTGTCTGT  541
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGTATATATGTGTATGTGTGTATGTATGTGTCTGT  541

seq1: chr10_65497371_65497653
seq2: B6Ng01-345I17.g_599_670 (reverse)

seq1  TAGAAAAATAACCACACAATTGAGTCTGTCATAATGAGAACATAAGTATT  50
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGGATGGAGATGTGGGAATGTGTTTAAGAAAGCTTGCTACTCTTCCTG  100
                                                        
seq2  --------------------------------------------------  0

seq1  AGGACCCATGTTTGCCACACATCCGGTGACTCAAAGTACCTGTAACTCCA  150
                                                        
seq2  --------------------------------------------------  0

seq1  GCTACAAAAGATTGCTGTTTTATTTTATGTCTTCTGATCTCTGGGGACAT  200
                                                        
seq2  --------------------------------------------------  0

seq1  CTCATGCTAGTCCACATACCCAAACA--CACATACACACACACACACACA  248
                      ||   ||| |  |||||      |   |  ||||
seq2  ----------------TAGAAAAATAACCACATGGGGGAATTAAGGCACA  34

seq1  ---CACACACACACACACACAGACATACACACACACAC  283
         | | ||||||||||||| |||||||||||||||||
seq2  TCTCTCGCACACACACACACTGACATACACACACACAC  72

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information