BAC Information

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BAC

Clone NameB6Ng01-346I21
Chromosome9 (Build37)
Map Location 79,706,263 - 79,707,483
singlet/doubletsinglet
Overlap geneFilip1
Upstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a
Downstream geneLOC100041218, LOC666490, Senp6, LOC100041249, Myo6, Impg1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346I21.bB6Ng01-346I21.g
ACCGA128420GA128421
length1,2271,154
definitionB6Ng01-346I21.b B6Ng01-346I21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtatctttcacaaatctatgtatctctatctatctatctatct
atctatctatctatctatctatctacctccatctctcttgactctatcct
ccttccctacctctctgtctttgtctctcatttctccactagggagatta
ctgagaagagaaagaaacaaaaagcaggcccagcaccaccaatcccagga
cagcacatagctgagtgattctgcccggcctacctctcccatggggctag
ggcctcaagtcctaaccttcagagaaaagcattaggaagcctaaaccgag
tttagtaatcctagttttcactgttgtcaccatcgtcgtcaccatcatca
ccatcacacggatgttttttacttttatatacctattattctgccagccc
agcccacatgtggaagaccttaaggaaatgagtacttatcatcctcaaat
ccacacccacaccgatggctagtagtacctgagtacctagcatgggtcag
atgcaatgctaagctttctaggcactgatccatttaatcctcacaacacc
atgtgaggtgtttgctgtggtcgttcccccaccccacagatgaggagcca
gggtttaatgaacggaggtgggctctgcaaaaccatacacagctggatct
caaacactgaaatgtgaaatggatccaggctgttacctgaatcctgccct
acaaacactctccctccaccccctcccttttagggaaagctaagggaagg
gatctgcttcaattggggaactatggagctgtcaatctcctttgaatact
atctaaatcagatctggccaccaacctaggttaaatgttaaatttaaaat
ttttttcagacttttaatttctatatttttaatttgtcctactaattgta
aagccatgaattgcttacctaaattttgagaaatcagtgtggctacatcc
attaaaggagcaccctaatttgacactgaacttccactatagcatggggg
aattattaaactgtcatgtcaataggtaatacagtagccataattcctaa
taataatcttgcataaatattgattcagtaatagccctaaatgatattat
ttcaccttaaaaattactttaaatactgccatttggaatttcacaataag
aactttaatatatgatactcttaggaataccttagaagacatgattaaac
attacctatcaatattgaaccaaacct

gaattctttcacaacattttgtttgagagattttatctacacggctattg
taaccatgtagataaatatcattctcaaagctacagagtatgcaattttg
ccactgtcctaacctacctcttcctgatagcatcctagtgcacgacctta
agttcctttattcatctaagaggatatgcaaataaagcttaggagaaaat
aatttgctaaattcatgcagaccacaagtagtaaagtttgaacattcaaa
ctagctttgcctgactccagaatcagaaatattaatggctctaccttcac
ccaagccaaaactggttttgtttatttgtttgagtttatctaggtatcta
catagcattctgatataaacctatgtgttctgtggagaaaaattattgat
cattttgtggagttgtatacccagttcccagttttcagatttgtctgttt
cctagagcgtgcccatacaattgtgtaattttggtttctttaaacacaca
cacacacacacacacacacacacacacacagagagagagagagagaaaga
gagagagagagagagagagagagagagagagagagagagagagagagaga
gagagaagtattataagaatgtgttttcattttaatcccatgtgtgggat
atggggctgcttccgactgtccacagcagctgactatgatttgcctcatg
ctctagcaggggtgtgattttgtcagctgcagatagtttctgtgattgtt
tgacgtttggaattcttgggacttttcagagggcatataaatgctaggac
ccaggaaggcttggggagtggatgtttgtaattggttgttgttggttcct
gttggttggttgctgttgattgtggttgttaagtaggtataagttagaca
ttttgactgcaagatcaaatttgcaccaaggaacttaggatcttcttatc
agcagcaagtagtctaagatatgtaccctctcttcgccccccccccattc
atttttctctagtgtgagtcaaaggtggagaggtagaagagaagagactt
cctaagtagcaagtctggctacaattccatttcttgaaagcctggatagt
acgtagtctacgtgcagtctacctcagaattggagactgacaggagactt
gtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_79706263_79707483
seq2: B6Ng01-346I21.b_45_1271

seq1  GAATTCTGTATCTTTCACAAATCTATGTATCTCTATCTATCTATCTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATCTTTCACAAATCTATGTATCTCTATCTATCTATCTATCT  50

seq1  ATCTATCTATCTATCTATCTATCTACCTCCATCTCTCTTGACTCTATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTACCTCCATCTCTCTTGACTCTATCCT  100

seq1  CCTTCCCTACCTCTCTGTCTTTGTCTCTCATTTCTCCACTAGGGAGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTACCTCTCTGTCTTTGTCTCTCATTTCTCCACTAGGGAGATTA  150

seq1  CTGAGAAGAGAAAGAAACAAAAAGCAGGCCCAGCACCACCAATCCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAGAGAAAGAAACAAAAAGCAGGCCCAGCACCACCAATCCCAGGA  200

seq1  CAGCACATAGCTGAGTGATTCTGCCCGGCCTACCTCTCCCATGGGGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACATAGCTGAGTGATTCTGCCCGGCCTACCTCTCCCATGGGGCTAG  250

seq1  GGCCTCAAGTCCTAACCTTCAGAGAAAAGCATTAGGAAGCCTAAACCGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAAGTCCTAACCTTCAGAGAAAAGCATTAGGAAGCCTAAACCGAG  300

seq1  TTTAGTAATCCTAGTTTTCACTGTTGTCACCATCGTCGTCACCATCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAATCCTAGTTTTCACTGTTGTCACCATCGTCGTCACCATCATCA  350

seq1  CCATCACACGGATGTTTTTTACTTTTATATACCTATTATTCTGCCAGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACACGGATGTTTTTTACTTTTATATACCTATTATTCTGCCAGCCC  400

seq1  AGCCCACATGTGGAAGACCTTAAGGAAATGAGTACTTATCATCCTCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACATGTGGAAGACCTTAAGGAAATGAGTACTTATCATCCTCAAAT  450

seq1  CCACACCCACACCGATGGCTAGTAGTACCTGAGTACCTAGCATGGGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCACACCGATGGCTAGTAGTACCTGAGTACCTAGCATGGGTCAG  500

seq1  ATGCAATGCTAAGCTTTCTAGGCACTGATCCATTTAATCCTCACAACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATGCTAAGCTTTCTAGGCACTGATCCATTTAATCCTCACAACACC  550

seq1  ATGTGAGGTGTTTGCTGTGGTCGTTCCCCCACCCCACAGATGAGGAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGGTGTTTGCTGTGGTCGTTCCCCCACCCCACAGATGAGGAGCCA  600

seq1  GGGTTTAATGAACGGAGGTGGGCTCTGCAAAACCATACACAGCTGGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTAATGAACGGAGGTGGGCTCTGCAAAACCATACACAGCTGGATCT  650

seq1  CAAACACTGAAATGTGAAATGGATCCAGGCTGTTACCTGAATCCTGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTGAAATGTGAAATGGATCCAGGCTGTTACCTGAATCCTGCCCT  700

seq1  ACAAACACTCTCCCTCCACCCCCTCCCTTTTAGGGAAAGCTAAGGGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACTCTCCCTCCACCCCCTCCCTTTTAGGGAAAGCTAAGGGAAGG  750

seq1  GATCTGCTTCAATTGGGGAACTATGGAGCTGTCAATCTCCTTTGAATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTTCAATTGGGGAACTATGGAGCTGTCAATCTCCTTTGAATACT  800

seq1  ATCTAAATCAGATCTGGCCACCAACCTAGGTTAAATGTTAAATTTAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATCAGATCTGGCCACCAACCTAGGTTAAATGTTAAATTTAAAAT  850

seq1  TTTTTTCAGACTTTTAATTTCTATATTTTTAATTTGTCCTACTAATTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAGACTTTTAATTTCTATATTTTTAATTTGTCCTACTAATTGTA  900

seq1  AAGCCATGAATTGCTTACCTAAATTTTGAGAAATCAGTGTGGCTACATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATGAATTGCTTACCTAAATTTTGAGAAATCAGTGTGGCTACATCC  950

seq1  ATTAAAGGAGCACCCTAATTTGACACTGAACTTCCACTATAGCATGGGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGAGCACCCTAATTTGACACTGAACTTCCACTATAGCATGGGGG  1000

seq1  AATTATTAAACTGTCATGTC-ATAGGTAATAACAGTAGCCATAATTCCTA  1049
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  AATTATTAAACTGTCATGTCAATAGGTAAT-ACAGTAGCCATAATTCCTA  1049

seq1  AT-ATAATCTTGCAT-AATA-TGATTCAGT-ATAGCCCT-AATGATATTA  1094
      || |||||||||||| |||| ||||||||| |||||||| ||||||||||
seq2  ATAATAATCTTGCATAAATATTGATTCAGTAATAGCCCTAAATGATATTA  1099

seq1  TTTCACCTTAAAAATTACTTTAAATACTG-CATTTGGATTTTCAC-ATAA  1142
      ||||||||||||||||||||||||||||| |||||||| |||||| ||||
seq2  TTTCACCTTAAAAATTACTTTAAATACTGCCATTTGGAATTTCACAATAA  1149

seq1  GACCTTTTAAATTATGATACTCTAAG--ATACTTTTAGAGCAATGGTATT  1190
      || | |||||  ||||||||||| ||  |||| ||   ||  |||  |||
seq2  GAAC-TTTAATATATGATACTCTTAGGAATACCTTAGAAGACATG--ATT  1196

seq1  AAACCATAACTATCAATAATGAACCAAACCT  1221
      ||||  || ||||||||| ||||||||||||
seq2  AAACATTACCTATCAATATTGAACCAAACCT  1227


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