BAC Information

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BAC

Clone NameB6Ng01-346J22
Chromosome9 (Build37)
Map Location 90,670,981 - 90,671,846
singlet/doubletsinglet
Overlap genenone
Upstream geneRasgrf1, Ctsh, Morf4l1, LOC621414, Adamts7, Tbc1d2b, LOC100039777, LOC100039925
Downstream geneEG434428, LOC621576, Zic1, Zic4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346J22.bB6Ng01-346J22.g
ACCGA128465GA128466
length966151
definitionB6Ng01-346J22.b B6Ng01-346J22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatagcattatatacctgaaagaaacaatcttccagggcaag
aacaatgtagcaaaggcaggggcacagggtttatggagcagaggcaaaaa
gggagagcgtgaaggtagagggatgaggggtgcttctgaaggacttggca
tgattacctagctctagatgtgaagaagatcagccaaatgaggttctaca
actttaatcaacacaagtttttaaaacaacatgtttccttttctttaagg
aatctttactacaacaatattgtctcaatgcaccagtaaatgtgtaaaga
agtctactatacaagatttttgtcatttaaagcatgtgtgcatttacaac
tgcccaatgatgtcttgaagccatgctaaatgctttcttttataaatctc
cttggtcatggggttctcatcacataaatagaaaagtaacaaagactgaa
gtttataccaagaagtgggctattgctgtaacaggcccaacaatcctggt
tttgagaaatgaagacgtctttgggactttggatgggaaaaaacagttgc
atgctgtaaacaaaacttaatgagctaccctagtaggagctctgataatg
ctgagggataggggactgtagaggcccagctcaggaggagtcagagggga
gcaacatatctgtactagaggatattcttgtggtaatggaaaataccgtg
actgctttctaccctcgtcctaagactttgcctaaacctaaatttagaag
taacagggtaattttgttttgcaaaaatttcagaacagctcaatatttaa
tctgttgtatggttattagtaatcacttatatgaaggtttgcaaggaaaa
aagaaaagcaagtagggcaaagggaatacaacttctatatttgaaagata
gtgtcagagagagagagacacacacacggggagagagagagagagagaga
gagagagagagagaga
tcagctgaggaatatcaaatggctgagaagcaccaatgccccagtgtagg
ggaatttcggggtgtggaggcaggagtgggtgggttggtgggggttcact
ctcatagaagcaggtggagggagaatgggatagggagttttgggggtgga
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_90670981_90671846
seq2: B6Ng01-346J22.b_45_910

seq1  GAATTCTTCATAGCATTATATACCTGAAAGAAACAATCTTCCAGGGCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATAGCATTATATACCTGAAAGAAACAATCTTCCAGGGCAAG  50

seq1  AACAATGTAGCAAAGGCAGGGGCACAGGGTTTATGGAGCAGAGGCAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTAGCAAAGGCAGGGGCACAGGGTTTATGGAGCAGAGGCAAAAA  100

seq1  GGGAGAGCGTGAAGGTAGAGGGATGAGGGGTGCTTCTGAAGGACTTGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGCGTGAAGGTAGAGGGATGAGGGGTGCTTCTGAAGGACTTGGCA  150

seq1  TGATTACCTAGCTCTAGATGTGAAGAAGATCAGCCAAATGAGGTTCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACCTAGCTCTAGATGTGAAGAAGATCAGCCAAATGAGGTTCTACA  200

seq1  ACTTTAATCAACACAAGTTTTTAAAACAACATGTTTCCTTTTCTTTAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATCAACACAAGTTTTTAAAACAACATGTTTCCTTTTCTTTAAGG  250

seq1  AATCTTTACTACAACAATATTGTCTCAATGCACCAGTAAATGTGTAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTACTACAACAATATTGTCTCAATGCACCAGTAAATGTGTAAAGA  300

seq1  AGTCTACTATACAAGATTTTTGTCATTTAAAGCATGTGTGCATTTACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACTATACAAGATTTTTGTCATTTAAAGCATGTGTGCATTTACAAC  350

seq1  TGCCCAATGATGTCTTGAAGCCATGCTAAATGCTTTCTTTTATAAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAATGATGTCTTGAAGCCATGCTAAATGCTTTCTTTTATAAATCTC  400

seq1  CTTGGTCATGGGGTTCTCATCACATAAATAGAAAAGTAACAAAGACTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCATGGGGTTCTCATCACATAAATAGAAAAGTAACAAAGACTGAA  450

seq1  GTTTATACCAAGAAGTGGGCTATTGCTGTAACAGGCCCAACAATCCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACCAAGAAGTGGGCTATTGCTGTAACAGGCCCAACAATCCTGGT  500

seq1  TTTGAGAAATGAAGACGTCTTTGGGACTTTGGATGGGAAAAAACAGTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAATGAAGACGTCTTTGGGACTTTGGATGGGAAAAAACAGTTGC  550

seq1  ATGCTGTAAACAAAACTTAATGAGCTACCCTAGTAGGAGCTCTGATAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTAAACAAAACTTAATGAGCTACCCTAGTAGGAGCTCTGATAATG  600

seq1  CTGAGGGATAGGGGACTGTAGAGGCCCAGCTCAGGAGGAGTCAGAGGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGATAGGGGACTGTAGAGGCCCAGCTCAGGAGGAGTCAGAGGGGA  650

seq1  GCAACATATCTGTACTAGAGGATATTCTTGTGGTAATGGAAAATACCGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATATCTGTACTAGAGGATATTCTTGTGGTAATGGAAAATACCGTG  700

seq1  ACTGCTTTCTACCCTCGTCCTAAGACTTTGCCTAAACCTAAATTTAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTCTACCCTCGTCCTAAGACTTTGCCTAAACCTAAATTTAGAAG  750

seq1  TAACAGGGTAATTTTGTTTTGCAAAAATTTCAGAACAGCTCAATATTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGGTAATTTTGTTTTGCAAAAATTTCAGAACAGCTCAATATTTAA  800

seq1  TCTGTTGTATGGTTATTAGTAATCACTTATATGAAGGTTTGCAAGGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTATGGTTATTAGTAATCACTTATATGAAGGTTTGCAAGGAAAA  850

seq1  AAGAAAAGCAAGTAGG  866
      ||||||||||||||||
seq2  AAGAAAAGCAAGTAGG  866