BAC Information

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BAC

Clone NameB6Ng01-347G15
Chromosome9 (Build37)
Map Location 109,467,883 - 109,469,082
singlet/doubletsinglet
Overlap geneFbxw15
Upstream geneImpdh2, 4733401H18Rik, Dalrd3, Wdr6, 4933406E20Rik, Arih2, ENSMUSG00000074075, Slc25a20, Prkar2a, Ihpk2, Nckipsd, Celsr3, Slc26a6, LOC100038959, Tmem89, Uqcrc1, Col7a1, Pfkfb4, Scotin, Trex1, 6620401K05Rik, Ccdc72, Ccdc51, EG665413, Plxnb1, E330009P21Rik, Fbxw13, Fbxw12, Fbxw14, LOC668758, EG382156, Fbxw16, Fbxw19, LOC635668
Downstream geneEG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1, Rn4.5s-ps2, Cspg5, Tmem103, Scap, Ptpn23, Ngp, Klhl18, Kif9, Setd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347G15.bB6Ng01-347G15.g
ACCGA129019GA129020
length1,2691,201
definitionB6Ng01-347G15.b B6Ng01-347G15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccaggtaccaggccatcctgaactatgcagtaagtaccaggtt
agccagggatgcatagtgagaccttgtctcaaaaacaaaaaccccaaatg
acaagaagtaaaaaactatatgtttatggcagtggttctctacctatggg
ttgtgaaccctatggcaaatttctatcttcaaaaatacttaagtcacgaa
tcctaacagtaacaaaattaccattatgaactagcaatgaaagtacctct
atgacagggcagacccccaacccccgcactgccacatgagaactgtatta
cagttcagtaggaagcattggtaaggttgagaagcactggcttagaggat
agatacacttacctacggagcctgacaacctagttcaattcctggggtac
cacaggatggaggagagatccaaatccctcaagttgtcccctgacctcca
acatgtgtgcttctggcaagaatatctacacaaacataataacgtaaaaa
caaattttaaaagaaatccccatttctcctgtgtctcccacaagtgctca
gagtaagctataaatacttgtcattgttttgcatttttagtctttgaaga
cagaatttctctgggtagccatggctaacctggattttgctctgtagagt
agactggccttgaacttggagatcgactggactgtgcctgattgtggatt
accttatgatcgtggattttgctctgtagagtagactggccttgaacttg
gagatcgactggactgtgcctgattgtggattaccttatgatcgtgcctc
cacatgatgtttttgtaaagggagcaggaggctccttggccagatgtgaa
cttgtgcctctttgatcgctactacagtagcaatctacagtttttttttt
ttgggagacatgtttccctttctgtcatggactagggactgggttctact
ctcctttcccagtacagttgtctttccatgtttgagctaccgactttcca
cactttcactgtgtcatagcctgcctttccgtgtccaggacatggtgaac
ttgacagaccaatggactgttttcattttctccgttcagactagcacaca
tgaagcaggatttgcttttcagtaagccatagatatttgctttacttaat
gaataaaaaatttgcctctcaattcgtgtagtacacgaaattgacgccag
ccttctattgccgaaccttgagggaaacagaagtctttgaagccagtgta
tagagacgcatgtttgagc
gaattcaccatacagacaacagacttgtcttgtccctttcttgttaagcc
acaccctgagatataacatgcatatccaaaaagtcctgcaaggaaacccc
aacagtatgtgggcagcagacagttgagggacaactcaacctgaaggaca
tatggttcatttccctctgccttgtagaaggcttggataaaagctgtgga
aaagatgaagggaggccaccaagcacactgtaggctggtggttcagacac
atttaccctttaatctgtttctatagatacaaaatgggtctggggcctgg
ggctttgactccctggccagagttctccgttctgttctgaaaggccaata
aacagtaatccattaatcatttggaggcagaaagttccaaagttcaagat
cattggtgtgcattacataaaggatttgaggtctgcctgtgatgcatgac
atcctgtctgaaggaagagagagagaaagaaaggaagggagaaagagaga
aagagagaaaggaagggagaaagagagaaagagagaaaggaagagagaaa
gagaaaggaagagagaaagagaaaggaaggaagagagaaagaaagaaaga
aagaaggaaagaaagaaagaaagagagaaaggaaggaaggaagagagaga
gagagagaaagaaagaaagaaagaaagaaagaaaagaagagagaaagaaa
gaaagaaagaaagaaagaaagaaaggaaggaagaaagaaaggaagggaga
aagaaaggaagggagaaagagagaaagagagagagagaaacaaaaggaaa
gacaaatcatgtatcattcctagtgaaggcaagcagaagttcttgatttt
aggccagcctcgtctacagatgaaattccagactagccatggctatagag
cgaggccttatctcaaacaaatggaaaaggaaagattctttccattcaag
aaacatattccacaaagttgccttcacacacacactacatacacacacac
acacacaacagtgtgccatgttaccatgtccattacaggaacagggatta
cttaaaataatgaatgtaaaactttaaaagcctttcttccatcagaaaac
tgttcccaagaagttttttggaaaaagaatattatactaagcctttttgg
tattgcccagattaacctttatctttacttaggaaggtacgatcattcag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_109467883_109469082
seq2: B6Ng01-347G15.g_64_1264

seq1  GAATTCACCATACAGACAACAGACTTGTCTTGTCCCTTTCTTGTTAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATACAGACAACAGACTTGTCTTGTCCCTTTCTTGTTAAGCC  50

seq1  ACACCCTGAGATATAACATGCATATCCAAAAAGTCCTGCAAGGAAACCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTGAGATATAACATGCATATCCAAAAAGTCCTGCAAGGAAACCCC  100

seq1  AACAGTATGTGGGCAGCAGACAGTTGAGGGACAACTCAACCTGAAGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTATGTGGGCAGCAGACAGTTGAGGGACAACTCAACCTGAAGGACA  150

seq1  TATGGTTCATTTCCCTCTGCCTTGTAGAAGGCTTGGATAAAAGCTGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTCATTTCCCTCTGCCTTGTAGAAGGCTTGGATAAAAGCTGTGGA  200

seq1  AAAGATGAAGGGAGGCCACCAAGCACACTGTAGGCTGGTGGTTCAGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGAAGGGAGGCCACCAAGCACACTGTAGGCTGGTGGTTCAGACAC  250

seq1  ATTTACCCTTTAATCTGTTTCTATAGATACAAAATGGGTCTGGGGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCCTTTAATCTGTTTCTATAGATACAAAATGGGTCTGGGGCCTGG  300

seq1  GGCTTTGACTCCCTGGCCAGAGTTCTCCGTTCTGTTCTGAAAGGCCAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGACTCCCTGGCCAGAGTTCTCCGTTCTGTTCTGAAAGGCCAATA  350

seq1  AACAGTAATCCATTAATCATTTGGAGGCAGAAAGTTCCAAAGTTCAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAATCCATTAATCATTTGGAGGCAGAAAGTTCCAAAGTTCAAGAT  400

seq1  CATTGGTGTGCATTACATAAAGGATTTGAGGTCTGCCTGTGATGCATGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTGTGCATTACATAAAGGATTTGAGGTCTGCCTGTGATGCATGAC  450

seq1  ATCCTGTCTGAAGGAAGAGAGAGAGAAAGAAAGGAAGGGAGAAAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTCTGAAGGAAGAGAGAGAGAAAGAAAGGAAGGGAGAAAGAGAGA  500

seq1  AAGAGAGAAAGGAAGGGAGAAAGAGAGAAAGAGAGAAAGGAAGAGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAAGGAAGGGAGAAAGAGAGAAAGAGAGAAAGGAAGAGAGAAA  550

seq1  GAGAAAGGAAGAGAGAAAGAGAAAGGAAGGAAGAGAGAAAGAAAGAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGAAGAGAGAAAGAGAAAGGAAGGAAGAGAGAAAGAAAGAAAGA  600

seq1  AAGAAGGAAAGAAAGAAAGAAAGAGAGAAAGGAAGGAAGGAAGAGAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAAAGAAAGAAAGAAAGAGAGAAAGGAAGGAAGGAAGAGAGAGA  650

seq1  GAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAGAGAGAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAGAGAGAAAGAAA  700

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGAAAGAAAGGAAGGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGAAAGAAAGGAAGGGAGA  750

seq1  AAGAAAGGAAGGGAGAAAGAGAGAAAGAGAGAGAGAGAAACAAAAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGAAGGGAGAAAGAGAGAAAGAGAGAGAGAGAAACAAAAGGAAA  800

seq1  GACAAATCATGTATCATTCCTAGTGAAGGCAAGCAGAAGTTCTTGATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATCATGTATCATTCCTAGTGAAGGCAAGCAGAAGTTCTTGATTTT  850

seq1  AGGCCAGCCTCGTCTACAGATGAAATTCCAGACTAGCCATGGCTATAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTCGTCTACAGATGAAATTCCAGACTAGCCATGGCTATAGAG  900

seq1  CGAGGCCTTATCTCAAAACAAATGGAAAAGGAAAGATTC-TTCCATTCAA  949
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  CGAGGCCTTATCTC-AAACAAATGGAAAAGGAAAGATTCTTTCCATTCAA  949

seq1  GAAAACATATTCCACAAAGTTGCCTTCACACACACAC-ACATACACACAC  998
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  G-AAACATATTCCACAAAGTTGCCTTCACACACACACTACATACACACAC  998

seq1  ACACACAC-ACAGTGTGCCATGTACACATGTCACATACAGGAACA-GGAA  1046
      |||||||| ||||||||||||||   ||||||   |||||||||| ||| 
seq2  ACACACACAACAGTGTGCCATGTTACCATGTCCATTACAGGAACAGGGAT  1048

seq1  TACTAAAAATAATGAATGTAAAAAACTTAAAAGCATATC-TCCATCAGAA  1095
      |||| |||||||||||||| ||||  |||||||| | || ||||||||||
seq2  TACTTAAAATAATGAATGT-AAAACTTTAAAAGCCTTTCTTCCATCAGAA  1097

seq1  AACTGTTCCAAGGAAGTTTTTT-GAAAAAG-ATA-TATACTAAAGCCTAT  1142
      ||||||||| | |||||||||| ||||||| ||| |||||| |||||| |
seq2  AACTGTTCCCAAGAAGTTTTTTGGAAAAAGAATATTATACT-AAGCCTTT  1146

seq1  TTGGTAATTTCCCCAG--TAAACTTTATCTATACTCTAGGAAGGGAACAA  1190
      ||||||  || |||||  ||| |||||||| |||| |||||||| |    
seq2  TTGGTA--TTGCCCAGATTAACCTTTATCTTTACT-TAGGAAGGTA--CG  1191

seq1  ATCATTCAGG  1200
      ||||||||||
seq2  ATCATTCAGG  1201