MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-347L08
Chromosome	9 (Build37)
Map Location	64,753,383 - 64,899,070
singlet/doublet	doublet
Overlap gene	AI115600, Slc24a1, 2010321M09Rik, Ptplad1, Dpp8
Upstream gene	Smad6, 2600006L11Rik, Lctl, Zwilch, Rpl4, Snapc5, Map2k1, Uchl4, Tipin, Dis3l, Megf11, Rab11a, F730015K02Rik
Downstream gene	Nope, Punc, Parp16, Cilp, Clpx, Pdcd7, Gm514, 5430433E21Rik, Rasl12, Ostb, Mtfmt, Spg21, Ankdd1a, Plekhq1, Pif1, LOC100041121, Rbpms2, Oaz2, Zfp609, LOC100041180, Trip4, 2810417H13Rik, Csnk1g1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Smad6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17130 MGI:1336883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2600006L11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76814 MGI:1924064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Lctl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235435 MGI:2183549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zwilch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68014 MGI:1915264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67891 MGI:1915141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snapc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330959 MGI:1914282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map2k1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26395 MGI:1346866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uchl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93841 MGI:1890440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tipin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66131 MGI:1921571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dis3l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213550 MGI:2143272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Megf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214058 MGI:1920951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53869 MGI:1858202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI115600 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102442 MGI:2142979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 76 ESTs, 2 Proteins

name	F730015K02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319526 MGI:2442199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Slc24a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214111 MGI:2384871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010321M09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69882 MGI:1917132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ptplad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57874 MGI:1889341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dpp8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74388 MGI:1921638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nope (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56741 MGI:1858497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Punc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19289 MGI:1202390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Parp16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214424 MGI:2446133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cilp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214425 MGI:2444507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clpx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270166 MGI:1346017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Pdcd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50996 MGI:1859170
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm514 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208080 MGI:2685360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs

name	5430433E21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74492 MGI:1921742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 2 Proteins

name	Rasl12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70784 MGI:1918034
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ostb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330962 MGI:3582052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtfmt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69606 MGI:1916856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spg21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27965 MGI:106403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ankdd1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384945 MGI:2686319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Plekhq1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102595 MGI:2143132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pif1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208084 MGI:2143057
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041121 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041121
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Rbpms2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71973 MGI:1919223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Oaz2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18247 MGI:109492
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp609 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214812 MGI:2674092
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041180 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Trip4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56404 MGI:1928469
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810417H13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68026 MGI:1915276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csnk1g1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214897 MGI:2660884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smad6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560672 GeneID:17130 MGI:1336883
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 6 (Drosophila) transcript_id : NM_008542.2

name	2600006L11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260001 GeneID:76814 MGI:1924064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600006L11 gene transcript_id : XM_001473989.1

name	Lctl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802015 GeneID:235435 MGI:2183549
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactase-like transcript_id : NM_145835.2

name	Zwilch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71143133 GeneID:68014 MGI:1915264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Zwilch, kinetochore associated, homolog (Drosophila) transcript_id : NM_026507.3

name	Rpl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374582 GeneID:67891 MGI:1915141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L4 transcript_id : NM_024212.3

name	Snapc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113681193 GeneID:330959 MGI:1914282
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small nuclear RNA activating complex, polypeptide 5 transcript_id : NM_183316.2

name	Map2k1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372689 GeneID:26395 MGI:1346866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase 1 transcript_id : NM_008927.3

name	Uchl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15809025 GeneID:93841 MGI:1890440
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin carboxyl-terminal esterase L4 transcript_id : NM_033607.1

name	Tipin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385283 GeneID:66131 MGI:1921571
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : timeless interacting protein transcript_id : NM_025372.2

name	Dis3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47604967 GeneID:213550 MGI:2143272
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DIS3 mitotic control homolog (S. cerevisiae)-like transcript_id : NM_001001295.1

name	Dis3l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130012 GeneID:213550 MGI:2143272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DIS3 mitotic control homolog (S. cerevisiae)-like transcript_id : NM_172519.2

name	Megf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362961 GeneID:214058 MGI:1920951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : multiple EGF-like-domains 11 transcript_id : NM_172522.2

name	Rab11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373351 GeneID:53869 MGI:1858202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB11a, member RAS oncogene family transcript_id : NM_017382.4

name	AI115600 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260033 GeneID:102442 MGI:2142979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 76 ESTs, 2 Proteins product : expressed sequence AI115600 transcript_id : XM_001476259.1

name	F730015K02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260035 GeneID:319526 MGI:2442199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA F730015K02 gene transcript_id : XM_001487795.1

name	Slc24a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450182 GeneID:214111 MGI:2384871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 transcript_id : NM_144813.1

name	2010321M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647252 GeneID:69882 MGI:1917132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010321M09 gene transcript_id : NM_001077631.1

name	2010321M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117647250 GeneID:69882 MGI:1917132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010321M09 gene transcript_id : NM_175153.3

name	Ptplad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28916662 GeneID:57874 MGI:1889341
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase-like A domain containing 1 transcript_id : NM_021345.1

name	Dpp8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542570 GeneID:74388 MGI:1921638
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dipeptidylpeptidase 8 transcript_id : NM_028906.2

name	Nope (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910463 GeneID:56741 MGI:1858497
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neighbor of Punc E11 transcript_id : NM_020043.1

name	Punc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892646 GeneID:19289 MGI:1202390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : putative neuronal cell adhesion molecule transcript_id : NM_008988.2

name	Parp16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328418 GeneID:214424 MGI:2446133
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly (ADP-ribose) polymerase family, member 16 transcript_id : NM_177460.3

name	Cilp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373302 GeneID:214425 MGI:2444507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cartilage intermediate layer protein, nucleotide pyrophosphohydrolase transcript_id : NM_173385.2

name	Clpx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113205070 GeneID:270166 MGI:1346017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caseinolytic peptidase X (E.coli) transcript_id : NM_011802.2

name	Clpx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113205068 GeneID:270166 MGI:1346017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caseinolytic peptidase X (E.coli) transcript_id : NM_001044389.1

name	Pdcd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7710019 GeneID:50996 MGI:1859170
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death protein 7 transcript_id : NM_016688.1

name	Gm514 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386174 GeneID:208080 MGI:2685360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs product : gene model 514, (NCBI) transcript_id : XM_146931.5

name	5430433E21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386175 GeneID:74492 MGI:1921742
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 2 Proteins product : RIKEN cDNA 5430433E21 gene transcript_id : XM_134954.7

name	Rasl12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677525 GeneID:70784 MGI:1918034
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS-like, family 12 transcript_id : NM_001033158.1

name	Ostb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341457 GeneID:330962 MGI:3582052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : organic solute transporter beta transcript_id : NM_178933.2

name	Mtfmt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802994 GeneID:69606 MGI:1916856
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial methionyl-tRNA formyltransferase transcript_id : NM_027134.2

name	Spg21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900518 GeneID:27965 MGI:106403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spastic paraplegia 21 homolog (human) transcript_id : NM_138584.2

name	Ankdd1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260003 GeneID:384945 MGI:2686319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : ankyrin repeat and death domain containing 1A transcript_id : XM_357954.6

name	Plekhq1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26986535 GeneID:102595 MGI:2143132
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family Q member 1 transcript_id : NM_153119.2

name	Pif1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801689 GeneID:208084 MGI:2143057
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) transcript_id : NM_172453.2

name	LOC100041121 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260046 GeneID:100041121
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Sec61-complex gamma-subunit transcript_id : XM_001476757.1

name	Rbpms2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130420 GeneID:71973 MGI:1919223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding protein with multiple splicing 2 transcript_id : NM_028030.3

name	Oaz2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37596299 GeneID:18247 MGI:109492
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ornithine decarboxylase antizyme 2 transcript_id : NM_010952.2

name	Zfp609 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369755 GeneID:214812 MGI:2674092
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 609 transcript_id : NM_172536.1

name	Trip4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71773828 GeneID:56404 MGI:1928469
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid hormone receptor interactor 4 transcript_id : NM_019797.3

name	2810417H13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71773931 GeneID:68026 MGI:1915276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810417H13 gene transcript_id : NM_026515.2

name	Csnk1g1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71773562 GeneID:214897 MGI:2660884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : casein kinase 1, gamma 1 transcript_id : NM_173185.2

name	Smad6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560673 CCDS:CCDS23273.1 GeneID:17130 MGI:1336883
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_process : GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Smad 6 product : MAD homolog 6 protein_id : NP_032568.2

name	2600006L11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260002 GeneID:76814 MGI:1924064
definition	codon_start : 1 product : hypothetical protein LOC76814 protein_id : XP_001474039.1

name	Lctl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003882 CCDS:CCDS23274.1 GeneID:235435 MGI:2183549
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA] codon_start : 1 note : Klotho-LPH related product : lactase-like protein_id : NP_665834.1

name	Zwilch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532956 CCDS:CCDS23275.1 GeneID:68014 MGI:1915264
definition	GO_component : GO:0000776 - kinetochore [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Zwilch protein_id : NP_080783.2

name	Rpl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794450 GeneID:67891 MGI:1915141
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : ribosomal protein L4 protein_id : NP_077174.1

name	Snapc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113681194 CCDS:CCDS23276.1 GeneID:330959 MGI:1914282
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : small nuclear RNA activating complex, polypeptide 5, 19kDa product : small nuclear RNA activating complex, polypeptide 5 protein_id : NP_899139.2

name	Map2k1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678794 CCDS:CCDS23277.1 GeneID:26395 MGI:1346866
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004708 - MAP kinase kinase activity [Evidence IMP]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030216 - keratinocyte differentiation [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : protein kinase, mitogen activated, kinase 1, p45; MAP kinase kinase 1 product : mitogen activated protein kinase kinase 1 protein_id : NP_032953.1

name	Uchl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809026 CCDS:CCDS23278.1 GeneID:93841 MGI:1890440
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin carboxyl-terminal esterase L4 protein_id : NP_291085.1

name	Tipin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313608 CCDS:CCDS23279.1 GeneID:66131 MGI:1921571
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : timeless-interacting protein protein_id : NP_079648.1

name	Dis3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47604968 CCDS:CCDS23280.1 GeneID:213550 MGI:2143272
definition	GO_function : GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : DIS3 mitotic control homolog (S. cerevisiae)-like protein_id : NP_001001295.1

name	Dis3l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369724 CCDS:CCDS23280.1 GeneID:213550 MGI:2143272
definition	GO_function : GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : DIS3 mitotic control homolog (S. cerevisiae)-like protein_id : NP_766107.1

name	Megf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369722 CCDS:CCDS23281.1 GeneID:214058 MGI:1920951
definition	codon_start : 1 product : MEGF11 protein protein_id : NP_766110.1

name	Rab11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980840 CCDS:CCDS23282.1 GeneID:53869 MGI:1858202
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0005802 - Golgi trans face [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0019905 - syntaxin binding [Evidence ISS] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0048227 - plasma membrane to endosome transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB11a, member RAS oncogene family protein_id : NP_059078.2

name	F730015K02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260036 GeneID:319526 MGI:2442199
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001487845.1

name	AI115600 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260034 GeneID:102442 MGI:2142979
definition	codon_start : 1 product : hypothetical protein LOC102442 protein_id : XP_001476309.1

name	Slc24a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450183 CCDS:CCDS23283.1 GeneID:214111 MGI:2384871
definition	codon_start : 1 product : solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 protein_id : NP_659062.1

name	2010321M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647253 GeneID:69882 MGI:1917132
definition	GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69882 protein_id : NP_001071099.1

name	2010321M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117647251 GeneID:69882 MGI:1917132
definition	GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 product : hypothetical protein LOC69882 protein_id : NP_780362.2

name	Ptplad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28916663 CCDS:CCDS23284.1 GeneID:57874 MGI:1889341
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007249 - I-kappaB kinase/NF-kappaB cascade [Evidence IDA]; GO:0007254 - JNK cascade [Evidence IDA]; GO:0007266 - Rho protein signal transduction [Evidence IDA] codon_start : 1 exception : mismatches in translation product : butyrate-induced transcript 1 protein_id : NP_067320.1

name	Dpp8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542571 CCDS:CCDS23285.1 GeneID:74388 MGI:1921638
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004274 - dipeptidyl-peptidase IV activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0008236 - serine-type peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : dipeptidylpeptidase 8 protein_id : NP_083182.2

name	Nope (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910464 GeneID:56741 MGI:1858497
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : amplimer WI-18508, mouse homolog product : neighbor of Punc e11 protein protein_id : NP_064427.1

name	Punc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679571 GeneID:19289 MGI:1202390
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : amplimer WI-14920, mouse homolog product : putative neuronal cell adhesion molecule protein_id : NP_033014.1

name	Parp16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328419 CCDS:CCDS23286.1 GeneID:214424 MGI:2446133
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003950 - NAD+ ADP-ribosyltransferase activity [Evidence IEA] GO_process : GO:0006471 - protein amino acid ADP-ribosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : poly (ADP-ribose) polymerase family, member 16 protein_id : NP_803411.2

name	Cilp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734196 CCDS:CCDS23287.1 GeneID:214425 MGI:2444507
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cartilage intermediate layer protein, nucleotide pyrophosphohydrolase protein_id : NP_775561.1

name	Clpx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113205071 CCDS:CCDS23288.1 GeneID:270166 MGI:1346017
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; caseinolytic protease X product : caseinolytic protease X isoform 1 protein_id : NP_035932.2

name	Clpx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113205069 GeneID:270166 MGI:1346017
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; caseinolytic protease X product : caseinolytic protease X isoform 2 protein_id : NP_001037854.1

name	Pdcd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710020 GeneID:50996 MGI:1859170
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] codon_start : 1 exception : unclassified translation discrepancy product : programmed cell death protein 7 protein_id : NP_057897.1

name	Gm514 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51764923 GeneID:208080 MGI:2685360
definition	codon_start : 1 product : hypothetical protein protein_id : XP_146931.3

name	5430433E21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38089943 GeneID:74492 MGI:1921742
definition	codon_start : 1 product : hypothetical protein LOC74492 protein_id : XP_134954.2

name	Rasl12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677526 CCDS:CCDS23290.1 GeneID:70784 MGI:1918034
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAS-like, family 12 protein_id : NP_001028330.1

name	Ostb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725804 CCDS:CCDS23291.1 GeneID:330962 MGI:3582052
definition	GO_component : GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005215 - transporter activity [Evidence IPI] GO_process : GO:0006810 - transport [Evidence IPI] codon_start : 1 note : Ost beta product : organic solute transporter beta protein_id : NP_849264.1

name	Mtfmt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312348 CCDS:CCDS23292.1 GeneID:69606 MGI:1916856
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]; GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial methionyl-tRNA formyltransferase protein_id : NP_081410.1

name	Spg21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070390 CCDS:CCDS23293.1 GeneID:27965 MGI:106403
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0030140 - trans-Golgi network transport vesicle [Evidence ISS] GO_function : GO:0042609 - CD4 receptor binding [Evidence ISS] GO_process : GO:0050851 - antigen receptor-mediated signaling pathway [Evidence ISS] codon_start : 1 product : spastic paraplegia 21 homolog protein_id : NP_613050.1

name	Ankdd1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260004 GeneID:384945 MGI:2686319
definition	codon_start : 1 product : similar to ankyrin repeat and death domain containing 1A protein_id : XP_357954.6

name	Plekhq1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24025665 CCDS:CCDS23294.1 GeneID:102595 MGI:2143132
definition	codon_start : 1 product : PH domain-containing protein homolog protein_id : NP_694759.1

name	Pif1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369615 CCDS:CCDS23295.1 GeneID:208084 MGI:2143057
definition	GO_function : GO:0004386 - helicase activity [Evidence IEA] codon_start : 1 note : DNA helicase-like protein; Pif1/Rrm3 DNA helicase-like protein product : PIF1 homolog protein_id : NP_766041.1

name	LOC100041121 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260047 GeneID:100041121
definition	codon_start : 1 product : similar to Sec61-complex gamma-subunit protein_id : XP_001476807.1

name	Rbpms2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980694 CCDS:CCDS23296.1 GeneID:71973 MGI:1919223
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding protein with multiple splicing 2 protein_id : NP_082306.2

name	Oaz2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11136624 GeneID:18247 MGI:109492
definition	GO_function : GO:0004857 - enzyme inhibitor activity [Evidence IEA]; GO:0008073 - ornithine decarboxylase inhibitor activity [Evidence TAS] GO_process : GO:0006595 - polyamine metabolism [Evidence TAS] codon_start : 1 note : protein translation dependent on +1 ribosomal frameshift; antizyme 2 product : ornithine decarboxylase antizyme 2 protein_id : NP_035082.1 ribosomal_slippage : _no_value

name	Zfp609 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369756 CCDS:CCDS23297.1 GeneID:214812 MGI:2674092
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : zinc finger protein 609 protein_id : NP_766124.1

name	Trip4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71773829 CCDS:CCDS23298.1 GeneID:56404 MGI:1928469
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcription coactivator ASC-1 product : thyroid hormone receptor interactor 4 protein_id : NP_062771.2

name	2810417H13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71773932 CCDS:CCDS23299.1 GeneID:68026 MGI:1915276
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : hypothetical protein LOC68026 protein_id : NP_080791.2

name	Csnk1g1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71773563 CCDS:CCDS23300.1 GeneID:214897 MGI:2660884
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : casein kinase I, gamma 1 product : casein kinase 1, gamma 1 protein_id : NP_775277.2

name	LOC100041180 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041180
definition	number : 1 pseudo : _no_value

clone name	MSMg01-340M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-375G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-449P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285N22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-347L08.b	B6Ng01-347L08.g
ACC	GA129235	GA129236
length	1,027	1,054
definition	B6Ng01-347L08.b	B6Ng01-347L08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(64,898,431 - 64,899,070)	(64,753,383 - 64,754,435)
sequence	gaattcacatctaggcttcaccatttacctatcatgtgaccttggacaaa tctgtctcattccactgtggtatgtcaacaatggagctcagcatgcactt cgccctagtactcttagcaccggtaaatacctaaacaaataaatcacaaa gcattattatgtaagattttgtatcctggcaaaatgctcacagtataatt tatatgtgctttgtttttgaaaatcatgaatgttttgacatttgtcggtt cttagctcctgcttgttaagtaatagtctgttgatgctatcgattttttt aaagacagtggagtggttttgaatgagaatggtttccattgtagttgccc ccatatttgacttggtccccagtcaacagaactgtttgggaaggattagg aagtgtggtcttattgaggaggtgtgtcactgggggtgagctttgaggtt tcaaaagcgcacaccaggcccagtgtctctctcatcatggttgtggatca gatgtaagcttccagctattattgctccagttccatgcctgcctgcctgt ctgcctgcctgccctcacactctctgccatagtgaccattgactaaccct ctgaaactgtaagcaaactcctaattaaatgcttcctaagttgacttgac ttggtcatggtacttcatcacatctatataacagtaattaacagatgggg tcttgtatgtgataggctcatctcagagactggcctgcctcgcctcctga atactgggattaacagtggagaccaccatgttgggtgatgctgtggatct ttttcatccattcttctgcagacatgtggtgggctgctattggttactgt gaataaagttcttgtacagtaacttccatggacatgtgttttcatttctt ttgagcaaatatccagaagcagagtggctgctcagtgagtgttcaacttc tgtgaggacgcatctttttttttttttttttaattaggtattttcttcat ttacattcatgctatcccaaaagtccc	gaattctgttgtagaaatgaggttaagaatcttaactaaatcccctgtag ctgggtgagctggtgtctgcaccatttttttttaattgaaaaagatattc tcagatgggtggtgggtggtggacatctttactcctaggaatgggaagca gtggtaggcaggtctctgagttcaacgccagcctggtcaacagggtgagt tctagaacaagtaggcctgctacactgagaagccctgtctcaaaacaaac aaacaaaaccaaaggatgaggaggaaggaaaatgatgaagataatttggt ttttctcagttactcttggcatgcttagtggaacaagttagcgttttatc gggatttatgacagaaatgattcttagattgctcctcttcggttttcatg gtttcgctctctatttttcaatcaggatccctgtcaaagtttgccttgcc tggaaaatcagagactgcatcttctctcaacaccagtaacgccaatatct tccagaactacgcaatggaggtactgtctgtctcagagagggcctgtgca cgctgctttataaaattccaatttccttaccattggtggttgtcggtgga gtgactgatactggatatgaatcctcagaaatttcagacagtgtaccatt acatccaaggttgctgagacctgttgtgttaagtcattgctctcgtgctg ggttattaggacagatccatgcttggtggcagtttgtcatcctataaaaa gcattttcactttcaacatttgtatttatagcttgctagacacatgtttc tctttgcacacttactttgcatcataaacacatttgaaaaccgtgaagac acagtctgggctttgtcgccgactcttctccgtcacgttgaagatttctc cttcccttacattgaggaagctacactttatacttaaaactttcccgact ttttctggaaaatgttgcttctaagattctgttaatgcgttgctactttg cactaatttacatgaaaggaatttgggctcttctggaaatacgcagtgga gcgc
quality values	Open. Hide. 62 47 42 37 62 37 30 43 39 49 62 62 47 62 62 62 62 62 44 43 62 59 44 62 62 59 62 62 62 41 34 39 26 24 28 33 28 32 42 42 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 59 62 56 49 42 54 62 62 54 49 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 58 58 58 58 54 54 58 54 58 58 54 58 58 44 58 49 58 58 58 54 54 54 54 45 36 41 52 54 58 58 58 58 58 58 52 58 58 54 42 58 52 52 52 54 58 54 58 54 58 52 58 58 54 54 54 58 58 42 58 54 58 58 58 58 49 54 58 50 54 58 58 54 40 58 58 58 53 49 58 58 58 58 50 53 50 52 58 58 50 52 49 58 54 51 46 51 53 52 51 51 58 58 53 58 53 53 53 53 58 49 47 54 49 53 51 53 53 46 51 50 47 53 58 49 58 58 49 58 33 53 46 51 54 52 50 53 53 51 50 58 42 51 35 58 22 50 42 39 50 50 54 50 40 29 58 31 41 38 35 58 43 19 49 52 53 35 43 52 42 37 46 35 36 39 44 35 39 45 50 37 40 42 39 54 54 54 33 28 39 29 47 35 35 40 33 44 32 54 23 37 23 50 37 38 41 35 42 53 53 32 41 54 54 32 42 41 25 33 26 52 52 32 51 33 39 29 37 33 54 54 54 21 35 33 40 32 38 18 14 17 35 26 26 39 42 40 35 35 23 41 17 28 32 45 34 53 53 31 46 52 53 32 34 41 32 31 32 32 18 37 11 12 42 30 31 27 52 31 31 34 30 31 25 51 22 33 32 31 31 27 21 51 25 28 31 38 43 29 37 31 31 18 21 26 31 29 36 37 31 14 13 14 31 43 32 43 31 46 48 31 31 24 31 47 41 31 33 48 48 41 31 33 25 31 30 43 29 26 33 42 34 31 24 15 35 34 15 14 12 10 44 11 29 27 33 28 32 30 27 31 30 24 14 12 25 25 19 25 38 16 21 31 31 25 33 24 9 9 27 30 11 17 30 30 20 18 9 12 31 27 33 21 30 29 41 11 41 31 38 38 30 36 41 41 28 43 44 38 31 11 25 17 26 14 13 16 16 23 32 44 43 13 35 16 31 20 18 18 33 24 14 18 8 29 7 9 4 9 30 21 10 11 25 21 33 21 8 43 39 26 22 21 33 37 34	Open. Hide. 62 49 44 59 62 62 59 39 25 29 28 18 19 12 28 27 27 27 54 54 56 59 59 62 62 59 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 43 49 42 43 35 54 62 62 62 62 62 59 62 62 59 50 59 62 59 62 62 54 54 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 39 42 38 30 28 31 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 62 62 54 42 62 49 38 62 62 62 62 62 62 62 58 54 58 58 58 58 58 58 54 52 54 54 58 58 58 52 58 58 47 52 58 58 58 58 58 58 58 58 49 45 54 54 58 58 58 38 45 58 45 35 58 58 52 54 54 45 42 58 58 58 52 54 58 39 41 58 58 54 42 35 45 58 58 58 45 41 54 54 58 58 54 50 58 58 51 58 50 21 58 58 37 35 58 58 42 29 25 58 37 41 58 43 58 53 50 47 49 35 50 51 50 47 35 51 50 46 41 47 39 54 50 48 58 50 47 49 58 39 41 39 47 47 58 47 32 58 36 41 29 27 39 44 53 41 46 46 51 58 58 46 53 51 35 53 41 25 39 46 52 51 58 58 26 42 43 32 53 52 23 58 36 30 37 40 41 33 33 35 14 39 53 52 43 40 58 43 36 43 39 34 39 39 51 51 33 50 23 49 33 45 39 51 39 39 33 21 44 54 51 33 18 32 25 26 54 51 38 41 36 32 37 54 51 25 17 33 40 32 27 54 53 52 29 27 25 54 46 32 41 37 44 37 37 16 53 32 33 25 29 37 41 34 53 29 52 41 18 54 23 30 35 29 34 54 35 26 24 29 32 29 40 52 24 26 35 45 47 21 31 32 28 37 28 31 26 26 32 45 32 26 33 17 31 33 42 16 16 52 45 38 24 35 37 29 31 25 26 23 33 24 20 31 26 38 28 28 39 34 51 24 20 31 42 33 24 9 18 9 8 46 16 31 19 31 31 31 34 31 37 33 31 26 25 31 24 31 31 31 32 30 46 27 17 31 16 33 26 32 31 29 31 22 25 25 46 33 41 27 13 11 22 8 18 34 17 33 24 31 32 24 32 31 23 31 12 10 11 41 31 27 27 19 21 18 30 11 41 41 16 24 30 46 8 7 41 35 22 26 9 27 31 48 44 28 36 32 31 32 18 48 44 42 22 34 16 19 19 26 30 31 20 11 25 29 8 7 6 23 31 19 31 21 25 36 41 16 34 10 16 16 9 31 21 17 22 19 25 48 23 21 11 8 8 20 21 19 26 31 7 7 17 15 13 16 19 30 7 13 39 10 17 28 36 16 33 39 30 16 14 6 4 12 20 28 24 25 21 15 10 6 21 24 9 9 6 23 6 6 18 22 11 28 14 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_64898431_64899070
seq2: B6Ng01-347L08.b_47_686 (reverse)

seq1  CTTAGGAAGCATTTAATTAGGAGTTTGCTTACAGTTTCAGAGGGTTAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAAGCATTTAATTAGGAGTTTGCTTACAGTTTCAGAGGGTTAGTC  50

seq1  AATGGTCACTATGGCAGAGAGTGTGAGGGCAGGCAGGCAGACAGGCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCACTATGGCAGAGAGTGTGAGGGCAGGCAGGCAGACAGGCAGGC  100

seq1  AGGCATGGAACTGGAGCAATAATAGCTGGAAGCTTACATCTGATCCACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGAACTGGAGCAATAATAGCTGGAAGCTTACATCTGATCCACAA  150

seq1  CCATGATGAGAGAGACACTGGGCCTGGTGTGCGCTTTTGAAACCTCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGAGAGAGACACTGGGCCTGGTGTGCGCTTTTGAAACCTCAAAG  200

seq1  CTCACCCCCAGTGACACACCTCCTCAATAAGACCACACTTCCTAATCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCCAGTGACACACCTCCTCAATAAGACCACACTTCCTAATCCTT  250

seq1  CCCAAACAGTTCTGTTGACTGGGGACCAAGTCAAATATGGGGGCAACTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACAGTTCTGTTGACTGGGGACCAAGTCAAATATGGGGGCAACTAC  300

seq1  AATGGAAACCATTCTCATTCAAAACCACTCCACTGTCTTTAAAAAAATCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAACCATTCTCATTCAAAACCACTCCACTGTCTTTAAAAAAATCG  350

seq1  ATAGCATCAACAGACTATTACTTAACAAGCAGGAGCTAAGAACCGACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATCAACAGACTATTACTTAACAAGCAGGAGCTAAGAACCGACAAA  400

seq1  TGTCAAAACATTCATGATTTTCAAAAACAAAGCACATATAAATTATACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAACATTCATGATTTTCAAAAACAAAGCACATATAAATTATACTG  450

seq1  TGAGCATTTTGCCAGGATACAAAATCTTACATAATAATGCTTTGTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATTTTGCCAGGATACAAAATCTTACATAATAATGCTTTGTGATTT  500

seq1  ATTTGTTTAGGTATTTACCGGTGCTAAGAGTACTAGGGCGAAGTGCATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTAGGTATTTACCGGTGCTAAGAGTACTAGGGCGAAGTGCATGC  550

seq1  TGAGCTCCATTGTTGACATACCACAGTGGAATGAGACAGATTTGTCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCCATTGTTGACATACCACAGTGGAATGAGACAGATTTGTCCAAG  600

seq1  GTCACATGATAGGTAAATGGTGAAGCCTAGATGTGAATTC  640
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATGATAGGTAAATGGTGAAGCCTAGATGTGAATTC  640

seq1: chr9_64753383_64754435
seq2: B6Ng01-347L08.g_70_1123

seq1  GAATTCTGTTGTAGAAATGAGGTTAAGAATCTTAACTAAATCCCCTGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGTAGAAATGAGGTTAAGAATCTTAACTAAATCCCCTGTAG  50

seq1  CTGGGTGAGCTGGTGTCTGCACCATTTTTTTTTAATTGAAAAAGATATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGAGCTGGTGTCTGCACCATTTTTTTTTAATTGAAAAAGATATTC  100

seq1  TCAGATGGGTGGTGGGTGGTGGACATCTTTACTCCTAGGAATGGGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGGTGGTGGGTGGTGGACATCTTTACTCCTAGGAATGGGAAGCA  150

seq1  GTGGTAGGCAGGTCTCTGAGTTCAACGCCAGCCTGGTCAACAGGGTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGGCAGGTCTCTGAGTTCAACGCCAGCCTGGTCAACAGGGTGAGT  200

seq1  TCTAGAACAAGTAGGCCTGCTACACTGAGAAGCCCTGTCTCAAAACAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACAAGTAGGCCTGCTACACTGAGAAGCCCTGTCTCAAAACAAAC  250

seq1  AAACAAAACCAAAGGATGAGGAGGAAGGAAAATGATGAAGATAATTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACCAAAGGATGAGGAGGAAGGAAAATGATGAAGATAATTTGGT  300

seq1  TTTTCTCAGTTACTCTTGGCATGCTTAGTGGAACAAGTTAGCGTTTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAGTTACTCTTGGCATGCTTAGTGGAACAAGTTAGCGTTTTATC  350

seq1  GGGATTTATGACAGAAATGATTCTTAGATTGCTCCTCTTCGGTTTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTATGACAGAAATGATTCTTAGATTGCTCCTCTTCGGTTTTCATG  400

seq1  GTTTCGCTCTCTATTTTTCAATCAGGATCCCTGTCAAAGTTTGCCTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCGCTCTCTATTTTTCAATCAGGATCCCTGTCAAAGTTTGCCTTGCC  450

seq1  TGGAAAATCAGAGACTGCATCTTCTCTCAACACCAGTAACGCCAATATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATCAGAGACTGCATCTTCTCTCAACACCAGTAACGCCAATATCT  500

seq1  TCCAGAACTACGCAATGGAGGTACTGTCTGTCTCAGAGAGGGCCTGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACTACGCAATGGAGGTACTGTCTGTCTCAGAGAGGGCCTGTGCA  550

seq1  CGCTGCTTTATAAAATTCCAATTTCCTTACCATTGGTGGTTGTCGGTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCTTTATAAAATTCCAATTTCCTTACCATTGGTGGTTGTCGGTGGA  600

seq1  GTGACTGATACTGGATATGAATCCTCAGAAATTTCAGACAGTGTACCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGATACTGGATATGAATCCTCAGAAATTTCAGACAGTGTACCATT  650

seq1  ACATCCAAGGTTGCTGAGACCTGTTGTGTTAAGTCATTGCTCTCGTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAGGTTGCTGAGACCTGTTGTGTTAAGTCATTGCTCTCGTGCTG  700

seq1  GGTTATTAGGACAGATCCATGCTTGGTGGCAGTTTGTCATCCTAT-AAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTTATTAGGACAGATCCATGCTTGGTGGCAGTTTGTCATCCTATAAAAA  750

seq1  GCATTTTCACTTTCAACATTTGTATTTATAGCTTGCTAGACACATG-TTC  798
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCATTTTCACTTTCAACATTTGTATTTATAGCTTGCTAGACACATGTTTC  800

seq1  TCTTTGCACACTTACTTTGCATCATAAACACATTTGAAAACCGTGAAGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCACACTTACTTTGCATCATAAACACATTTGAAAACCGTGAAGAC  850

seq1  ACAGTCT-GGCTTTGTCGCCGACTCTTCTCCGTCACGTTGAAGATTTCTC  897
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTGGGCTTTGTCGCCGACTCTTCTCCGTCACGTTGAAGATTTCTC  900

seq1  CTTCCCTTACAATGAGGAAGCTACACTTTATACTTTAAAACTTTCCCGAC  947
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  CTTCCCTTACATTGAGGAAGCTACACTTTATAC-TTAAAACTTTCCCGAC  949

seq1  TTTTTCTGGAAAATGTTGCTTCTAAAGATTCTGTTAAATGCGGTTGCTAC  997
      ||||||||||||||||||||||| ||||||||||| ||||| ||||||||
seq2  TTTTTCTGGAAAATGTTGCTTCT-AAGATTCTGTT-AATGC-GTTGCTAC  996

seq1  TTTGCACTAATTTACATG-AAGGGATTTGGGCTCTTCTGGAAATACGCAG  1046
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  TTTGCACTAATTTACATGAAAGGAATTTGGGCTCTTCTGGAAATACGCAG  1046

seq1  T-GAGCGC  1053
      | ||||||
seq2  TGGAGCGC  1054

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BAC

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Alignment Information