BAC Information

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BAC

Clone NameB6Ng01-347M22
Chromosome9 (Build37)
Map Location 82,766,538 - 82,767,632
singlet/doubletsinglet
Overlap genePhip
Upstream gene4930486G11Rik, LOC100039085, Irak1bp1
Downstream geneLOC100039144, Hmgn3, LOC100039159, 4930431B11Rik, EG619900, LOC100039186, LOC100039200, Sh3bgrl2, LOC100039222, Elovl4, Ttk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347M22.bB6Ng01-347M22.g
ACCGA129298GA129299
length1,0921,185
definitionB6Ng01-347M22.b B6Ng01-347M22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcctttgaagcaggcctcaaggtaggttacccataaacaacgt
gccactattgcaccaggggacacgtgttgcctgacagttggtgtgtgcat
ataggctccagctctggataagacagttgttttcttctcctgcaggctgc
agtgtaccttctgcattgtataagaataggctgcaggtagagggtctggg
gaatccactgagacttctgtacccaaagcgaggaatggtttcattaatag
ggccttgtcatctagttatgatagtcaatcagaaccattgggaaaaagct
tgtgttgtgtggggtacttcctgggcgtcccttaccagtaactcagaaag
atgtattctgaacccaacaatgaggggttttttgtttgtttgtttgtttt
tgtttttttgtttttaataacccacatcttctgggtagtagctacccgtt
cagggttcttatattcaaattcttcttttaaaaataagatcttaaagttg
gcttacaaaatagtggtattttgtttgtttgtttgtttgtttgtttgttt
ttcatagatttattagtttggactaacctacctccaacctctcctcagtc
ctatctctccttacacatttaattccaaggattctcccacctctcctttt
aatgtgactgggattctgtttcccgctgggttttgttttttttttccttt
ccttttctgaatagttttactttgaactgcatgttgtcagatattagaat
actaagtactgtttcctaattatacttgcccagaacacctttctctatct
atttgcactaaaacgaaaccattttgtaacccagtctgatagtctatttt
tttttaaaatgggaagttgtggctgttgatattcagagttattcacaatt
ttgtctgtattcttatcacttcattgtttctttgtttttggtgtttcttg
gacttttttgataaattgtcctagcgtttacttatcttctacggctcttg
aatgtgtaaatccttctctcattttacatagtctttctattatcaatagt
gcttgcctagcgttcttaattccttttattgtttttctcttg
gaattctcctctgaagaaacagacttggaggaggaagaagctcattatga
gagaaaagggtaccagccagataaaatgctagctaatcagttaaggaaaa
agccaaaagcggctggcgaaggccagcatgctgctcagcctccgggcagt
cagcttcaaggtcatagtgcacttccgccctatgcggagcccccaccatg
cgtagtgcgtcagccctgcgcagagaggcaatgcgcagactcgttcattc
caaaggaggaacaaaggaaaataaaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgatccggtagaatatgtgcagattaaaga
gcttgctgagtcggtccgtaaatatggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
atgattgcaaaagccgctctccctagtatgggcaaatatatggaatggag
agctctatggcaagaggctgcacaagcacaggcccgagcaaacactgctg
ctttgactccagaacagagagattggacttttgacttgttaacgggtcag
ggagcttatactgctgatcaaacaaactaccactggggagcttatgccca
aatttcctccacggctattagggcctggaaggtgctctcccgagcaggtg
aagccactggacaactaacaaagattgtccagagacctcaggagtcattc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
ttcagagcaagccgcacctctggtagaacagctcatttatgagcaagcca
cacaggagtgccgagcggccatagccccaagaaagaacaaaggtttacaa
gactggctcaggtttgtcgggagcttgggggacctctcattgtgcgttac
ttccattcagtatgagaaatttactagggcagctaatttgtcaaaagtct
ttctcagtatatgtacagaattggacggctgaatttgaacagacccttcg
gaattgagacttggcatcatcagtcacctccaccgccgcttggaactggt
cctgacaagattacccattgattcctagcatttcttctttagattggggt
gggatacaaaggtccctttccgcctctgggagggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_82766538_82767632
seq2: B6Ng01-347M22.b_47_1138 (reverse)

seq1  CAAGAGAAAAAC-ATAAAAGGAATTTAAGAACGCTAAGCCAGCACTATGG  49
      |||||||||||| |||||||||| |||||||||||| || |||||||| |
seq2  CAAGAGAAAAACAATAAAAGGAA-TTAAGAACGCTAGGCAAGCACTATTG  49

seq1  ATAATAGAAAGACTATGTAAAAATGAAGAGAAGGATTAACACATTCAAGG  99
      |||||||||||||||||| |||||| ||||||||||| |||||||||| |
seq2  ATAATAGAAAGACTATGT-AAAATG-AGAGAAGGATTTACACATTCAA-G  96

seq1  AGCCGTAGAAGATAAGTAAACGCTAGGACAATTTATCAAAAAAGTCCAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTAGAAGATAAGTAAACGCTAGGACAATTTATCAAAAAAGTCCAAG  146

seq1  AAAACACCAAAAACAAAGAAACAATGAAGTGATAAGAATACAGACAAAAT  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAACACCAAAAACAAAGAAACAATGAAGTGATAAGAATACAGACAAAAT  195

seq1  TGTGAATAACTCTGAATATCAACAGCCACAACTTCCCATTTT-AAAAAAA  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTGAATAACTCTGAATATCAACAGCCACAACTTCCCATTTTAAAAAAAA  245

seq1  ATAGACTATCAGACTGGGTTACAAAATGGTTTCGTTTTAGTGCAAATAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTATCAGACTGGGTTACAAAATGGTTTCGTTTTAGTGCAAATAGA  295

seq1  TAGAGAAAGGTGTTCTGGGCAAGTATAATTAGGAAACAGTACTTAGTATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAAGGTGTTCTGGGCAAGTATAATTAGGAAACAGTACTTAGTATT  345

seq1  CTAATATCTGACAACATGCAGTTCAAAGTAAAACTATTCAGAAAAGGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATCTGACAACATGCAGTTCAAAGTAAAACTATTCAGAAAAGGAAA  395

seq1  GGAAAAAAAAAACAAAACCCAGCGGGAAACAGAATCCCAGTCACATTAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAAAACAAAACCCAGCGGGAAACAGAATCCCAGTCACATTAAA  445

seq1  AGGAGAGGTGGGAGAATCCTTGGAATTAAATGTGTAAGGAGAGATAGGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGTGGGAGAATCCTTGGAATTAAATGTGTAAGGAGAGATAGGAC  495

seq1  TGAGGAGAGGTTGGAGGTAGGTTAGTCCAAACTAATAAATCTATGAAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGAGGTTGGAGGTAGGTTAGTCCAAACTAATAAATCTATGAAAAA  545

seq1  CAAACAAACAAACAAACAAACAAACAAAATACCACTATTTTGTAAGCCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACAAACAAACAAAATACCACTATTTTGTAAGCCAA  595

seq1  CTTTAAGATCTTATTTTTAAAAGAAGAATTTGAATATAAGAACCCTGAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGATCTTATTTTTAAAAGAAGAATTTGAATATAAGAACCCTGAAC  645

seq1  GGGTAGCTACTACCCAGAAGATGTGGGTTATTAAAAACAAAAAAACAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGCTACTACCCAGAAGATGTGGGTTATTAAAAACAAAAAAACAAAA  695

seq1  ACAAACAAACAAACAAAAAACCCCTCATTGTTGGGTTCAGAATACATCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAAAAACCCCTCATTGTTGGGTTCAGAATACATCTT  745

seq1  TCTGAGTTACTGGTAAGGGACGCCCAGGAAGTACCCCACACAACACAAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTACTGGTAAGGGACGCCCAGGAAGTACCCCACACAACACAAGC  795

seq1  TTTTTCCCAATGGTTCTGATTGACTATCATAACTAGATGACAAGGCCCTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCAATGGTTCTGATTGACTATCATAACTAGATGACAAGGCCCTA  845

seq1  TTAATGAAACCATTCCTCGCTTTGGGTACAGAAGTCTCAGTGGATTCCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAAACCATTCCTCGCTTTGGGTACAGAAGTCTCAGTGGATTCCCC  895

seq1  AGACCCTCTACCTGCAGCCTATTCTTATACAATGCAGAAGGTACACTGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTCTACCTGCAGCCTATTCTTATACAATGCAGAAGGTACACTGCA  945

seq1  GCCTGCAGGAGAAGAAAACAACTGTCTTATCCAGAGCTGGAGCCTATATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAGGAGAAGAAAACAACTGTCTTATCCAGAGCTGGAGCCTATATG  995

seq1  CACACACCAACTGTCAGGCAACACGTGTCCCCTGGTGCAATAGTGGCACG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCAACTGTCAGGCAACACGTGTCCCCTGGTGCAATAGTGGCACG  1045

seq1  TTGTTTATGGGTAACCTACCTTGAGGCCTGCTTCAAAGGAGGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATGGGTAACCTACCTTGAGGCCTGCTTCAAAGGAGGAATTC  1092