MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-348C16
Chromosome	9 (Build37)
Map Location	61,576,222 - 61,709,101
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Larp6, LOC100040447, Uaca, ENSMUSG00000052143, A430102L10, LOC100040481, Tle3, LOC100039851
Downstream gene	Rplp1, Kif23, Paqr5, Glce, Spesp1, LOC100039897, Anp32a, Coro2b, Itga11, EG665478, Fem1b, Cln6, Calml4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Larp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67557 MGI:1914807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040447 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040447
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Uaca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72565 MGI:1919815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000052143 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:791387 MGI:3642719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	A430102L10 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:330956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040481 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Tle3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21887 MGI:104634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039851 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins

name	Rplp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56040 MGI:1927099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71819 MGI:1919069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paqr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74090 MGI:1921340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glce (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93683 MGI:2136405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spesp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66712 MGI:1913962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039897 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039897
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Anp32a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11737 MGI:108447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Coro2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235431 MGI:2444283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itga11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319480 MGI:2442114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665478 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665478 MGI:3643729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Fem1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14155 MGI:1335087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cln6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76524 MGI:2159324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Calml4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75600 MGI:1922850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Larp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372822 GeneID:67557 MGI:1914807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : La ribonucleoprotein domain family, member 6 transcript_id : NM_026235.3

name	LOC100040447 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260010 GeneID:100040447
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100040447 transcript_id : XM_001475271.1

name	Uaca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130474 GeneID:72565 MGI:1919815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uveal autoantigen with coiled-coil domains and ankyrin repeats transcript_id : NM_028283.2

name	ENSMUSG00000052143 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260012 GeneID:791387 MGI:3642719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : predicted gene, ENSMUSG00000052143 transcript_id : XM_001475287.1

name	A430102L10 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259996 GeneID:330956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein A430102L10 transcript_id : XM_001473612.1

name	LOC100040481 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260014 GeneID:100040481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100040481 transcript_id : XM_001475306.1

name	Tle3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678360 GeneID:21887 MGI:104634
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin-like enhancer of split 3, homolog of Drosophila E(spl) transcript_id : NM_009389.1

name	LOC100039851 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259998 GeneID:100039851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins product : similar to Hmgb1 protein transcript_id : XM_001473665.1

name	Rplp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130696 GeneID:56040 MGI:1927099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein, large, P1 transcript_id : NM_018853.3

name	Kif23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29568093 GeneID:71819 MGI:1919069
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 23 transcript_id : NM_024245.3

name	Paqr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383667 GeneID:74090 MGI:1921340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : progestin and adipoQ receptor family member V transcript_id : NM_028748.2

name	Glce (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892759 GeneID:93683 MGI:2136405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucuronyl C5-epimerase transcript_id : NM_033320.4

name	Spesp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802273 GeneID:66712 MGI:1913962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm equatorial segment protein 1 transcript_id : NM_025721.2

name	Anp32a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254599 GeneID:11737 MGI:108447
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acidic (leucine-rich) nuclear phosphoprotein 32 family, member A transcript_id : NM_009672.2

name	Coro2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803424 GeneID:235431 MGI:2444283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coronin, actin binding protein, 2B transcript_id : NM_175484.2

name	Itga11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254394 GeneID:319480 MGI:2442114
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin, alpha 11 transcript_id : NM_176922.4

name	Fem1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402518 GeneID:14155 MGI:1335087
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : feminization 1 homolog b (C. elegans) transcript_id : NM_010193.3

name	Cln6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372439 GeneID:76524 MGI:2159324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceroid-lipofuscinosis, neuronal 6 transcript_id : NM_001033175.2

name	Calml4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129956 GeneID:75600 MGI:1922850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmodulin-like 4 transcript_id : NM_138304.2

name	Larp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981025 CCDS:CCDS23258.1 GeneID:67557 MGI:1914807
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006405 - RNA export from nucleus [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 product : acheron protein_id : NP_080511.2

name	LOC100040447 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260011 GeneID:100040447
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475321.1

name	Uaca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077007 CCDS:CCDS23259.1 GeneID:72565 MGI:1919815
definition	GO_component : GO:0043293 - apoptosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008630 - DNA damage response, signal transduction resulting in induction of apoptosis [Evidence IMP]; GO:0008631 - induction of apoptosis by oxidative stress [Evidence IMP]; GO:0050728 - negative regulation of inflammatory response [Evidence IMP]; GO:0042347 - negative regulation of NF-kappaB import into nucleus [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence IMP] [Evidence IDA]; GO:0043280 - positive regulation of caspase activity [Evidence IMP] [Evidence IDA]; GO:0042307 - positive regulation of protein import into nucleus [Evidence IMP]; GO:0009411 - response to UV [Evidence IMP] codon_start : 1 product : nuclear membrane binding protein NUCLING protein_id : NP_082559.1

name	ENSMUSG00000052143 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260013 GeneID:791387 MGI:3642719
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475337.1

name	A430102L10 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259997 GeneID:330956
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473662.1

name	LOC100040481 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260015 GeneID:100040481
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475356.1

name	Tle3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678361 GeneID:21887 MGI:104634
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007222 - frizzled signaling pathway [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : transducin-like enhancer of split 3 product : transducin-like enhancer protein 3 protein_id : NP_033415.1

name	LOC100039851 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259999 GeneID:100039851
definition	codon_start : 1 product : similar to Hmgb1 protein protein_id : XP_001473715.1

name	Rplp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256519 CCDS:CCDS23260.1 GeneID:56040 MGI:1927099
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA] codon_start : 1 note : acidic ribosomal phosphoprotein P1 product : ribosomal protein, large, P1 protein_id : NP_061341.1

name	Kif23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29568094 GeneID:71819 MGI:1919069
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation note : kinesin-like 5 (mitotic kinesin-like protein 1) product : kinesin family member 23 protein_id : NP_077207.2

name	Paqr5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037337 CCDS:CCDS23261.1 GeneID:74090 MGI:1921340
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : membrane progestin receptor gamma protein_id : NP_083024.1

name	Glce (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301488 CCDS:CCDS23262.1 GeneID:93683 MGI:2136405
definition	GO_component : GO:0005618 - cell wall [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IMP] [Evidence IDA] GO_process : GO:0006024 - glycosaminoglycan biosynthesis [Evidence IEA]; GO:0015012 - heparan sulfate proteoglycan biosynthesis [Evidence IDA]; GO:0030210 - heparin biosynthesis [Evidence IDA]; GO:0009252 - peptidoglycan biosynthesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA] codon_start : 1 note : heparan sulfate-glucuronic acid C5-epimerase product : D-glucuronyl C5-epimerase protein_id : NP_201577.3

name	Spesp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385180 CCDS:CCDS23263.1 GeneID:66712 MGI:1913962
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 product : sperm equatorial segment protein 1 protein_id : NP_079997.1

name	Anp32a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254600 GeneID:11737 MGI:108447
definition	GO_component : GO:0016363 - nuclear matrix [Evidence IPI]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : leucine rich acidic nuclear protein; acidic nuclear phosphoprotein 32; vacidic (leucine-rich) nuclear phosphoprotein 32 family, member A product : acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein_id : NP_033802.2

name	Coro2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202047 CCDS:CCDS23264.1 GeneID:235431 MGI:2444283
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] codon_start : 1 note : KIAA0925-like; E130012P22 product : coronin, actin binding protein, 2B protein_id : NP_780693.1

name	Itga11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254395 CCDS:CCDS23265.1 GeneID:319480 MGI:2442114
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006929 - substrate-bound cell migration [Evidence IMP] codon_start : 1 exception : mismatches in translation note : integrin a11 product : integrin alpha 11 protein_id : NP_795896.3

name	Fem1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753840 CCDS:CCDS23266.1 GeneID:14155 MGI:1335087
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : feminization 1 homolog b protein_id : NP_034323.1

name	Cln6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677520 CCDS:CCDS23267.1 GeneID:76524 MGI:2159324
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0031987 - locomotion during locomotory behavior [Evidence IMP]; GO:0007040 - lysosome organization and biogenesis [Evidence IMP]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : neuronal ceroid lipofuscinosis product : ceroid-lipofuscinosis, neuronal 6 protein_id : NP_001028347.1

name	Calml4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956268 GeneID:75600 MGI:1922850
definition	codon_start : 1 product : calmodulin-like 4 protein_id : NP_612177.1

name	LOC100039897 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039897
definition	number : 1 pseudo : _no_value

name	EG665478 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665478
definition	number : 1 pseudo : _no_value

clone name	MSMg01-396H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-408B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070L04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-348C16.b	B6Ng01-348C16.g
ACC	GA129542	GA129543
length	1,123	1,150
definition	B6Ng01-348C16.b	B6Ng01-348C16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(61,576,222 - 61,577,325)	(61,707,955 - 61,709,101)
sequence	gaattcacgtgtatggaagaggcagcaccggttcctggggttgagatggc tcccagttcaagtctctacttgaacaacctctgttgtaagctttgcagtg tttggcgagggctcagagaaccttggttcccctaacctgtatcataaaag agaacactggtccactatactatatttgtgaatcaagtgtttcaggactt ttacaatgttccattttatggagctgcagggtgaggacctgggtacagag ctccacagtaaagtcttgccatgcaagcataaagacctgagttcaatcct caggacccataaaaaagccaggtgtgatggaacaaacacacttgtaatcc cagtgccaaagacacagaggcaggtagaaccctgggctcactgtccagct agcccagatgaatcagtgggtcccatgccactgagaccctgtctcaaaca tacacatgcatgtacacacacacacacacacacacacacacacacagaga gagagagagagagagagagagagagagagagagagtttgattttagggag cttcaggctacaccgtggtattatgtaacacccagtaaattcgggcctgt accagtctctcttcagggaaatacagatatttacagtcagcaggtaatta agacagtaaatcatccacatgagctcgggcctcacttgcctccagttgaa tcagacaaatccttccgttgccatagcttcttggatgctttgggatggag gtgagggacttggcttatctgggatctgaaacagctcgtgccccatgagg ctacaggatgtatcgaatgatataggcacagcactcctgagttttgctag tgtgattttgttgttgttgtggttttcattttagatgggtttatgtgtat aagtgtcttgcctgcatggtacatgcactgtgtacacacaggtgtgtggc agaaggttcttaagagagagttcagattcccctagagctgggagtttagg atgggttgtaagtttgctatggtggggtgctggaaactgagtcttaggtt cctctgcaggaacaacaagtggtttggcttctggagtctttctctctagc cattcttcccccagcattttaaa	gaattcttgaggactgtcagggctcccacttaccagagcttctgatgttt agaatttctagtttttaaagataaacaatatgtcctaacccaccaagatt accattgctgagctgatatcagcggttggcagatgcactgagcccttttt taggttaggaatgtcatttgactgtgtcccatgacatggttgtgtttgtc accgatggagccattgggtatcacttggttcttgtgttcaccgttctctg atttctcttgtcaggagagcttcatttggacccactctcaggcattgtga cttcatcccttgtgcagagctgtgaggtagaattcagacccagctaatca gagattcccctggccaaggtggttgattctggatggtcatatgacccaaa gagagtaagtcacgtcttggaatgagatcgctccctctctgaaggatggg aagctgaggaggaactgaacggatgatggaacggatactacaaaagacaa aactgtctgcctattggctgctcaatctacgaggctgcatgtcccagcac tcatctggcctggactgcctgggggattcctggagagccactggtcttca gaccatatcagaagacccaataagctgggttctgacatcagcaataggtg gcttcagggaggatgtcgaggtagatgtgctcatcaacaggaagcaaggc aggcaaatgagcatcattgctctcccctcaacatcagcctcatatctggg cgccacccactctaggagtgtcttttctctcctctgtcaatccttctcag aaatgctctcatagacttatctgctcaaagaccttagttgatttcctgat cctaccaagctagctattgcagagggtgtaagaccagaagtgaccactag aggacactgtgtctaagaggttgctgggcggtcccacccaaagtgggcaa ggagctgggagttagaaaccaggctgctcaagcatacaacattttttttt ttttatttcagtgagtttgagctgtttgtgtgctgctatgtgcacttgga gtgtcatagttgaaataagagccaagtgtccctcatattcttgctggaaa cctcaagaaggcttgatctggtgaggagggtggtagcattcaaatcagag
quality values	Open. Hide. 62 47 31 38 62 37 22 47 62 62 62 54 56 47 62 54 62 62 62 62 62 59 45 62 62 62 62 59 59 45 38 38 59 54 38 48 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 59 62 62 62 59 62 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 54 54 62 62 62 62 62 62 62 59 59 62 49 54 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 59 62 62 62 59 59 59 62 59 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 56 62 62 62 62 62 62 62 62 62 56 62 56 56 51 56 56 62 56 62 56 62 56 62 56 62 56 56 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 56 62 56 62 62 47 41 62 62 62 62 56 62 62 62 62 62 62 62 42 52 33 49 62 62 43 46 48 45 52 52 43 62 62 43 62 62 54 62 47 62 62 43 52 52 52 42 54 41 47 52 54 58 58 48 46 58 48 30 46 18 30 54 54 52 41 42 47 40 40 42 48 54 58 52 58 43 58 45 54 49 35 58 54 58 58 44 52 52 41 50 42 54 52 42 42 58 54 42 54 54 45 33 54 39 40 52 49 41 58 46 54 52 42 48 52 54 52 41 35 52 54 47 36 54 58 50 39 41 53 52 39 37 52 41 58 54 54 47 48 45 50 50 47 48 39 51 41 46 46 47 49 48 50 50 47 37 30 40 37 33 50 51 50 48 17 30 46 50 17 45 38 19 58 37 41 31 41 50 47 33 28 42 42 42 40 36 24 22 52 41 17 36 47 42 43 44 47 52 39 52 27 49 29 49 58 24 31 48 42 35 29 49 24 37 10 28 31 41 41 29 58 41 32 26 51 37 49 33 22 50 52 39 52 39 39 32 54 33 37 34 39 39 26 39 54 27 39 39 33 28 49 39 42 32 52 23 42 33 39 39 42 41 39 23 49 16 52 25 33 16 40 41 42 29 45 37 28 39 28 40 27 33 24 42 39 29 26 39 21 6 26 33 18 22 12 31 42 32 37 53 32 46 24 22 47 23 42 52 47 27 21 18 29 33 14 6 35 23 32 28 13 37 26 26 26 8 32 49 30 35 54 23 30 34 39 16 21 38 40 40 38 42 23 41 35 32 32 29 13 36 22 31 47 11 40 30 17 31 29 47 15 12 5 23 15 21 41 23 42 41 21 32 34 53 31 9 20 31 31 21 6 20 33 41 20 32 33 12 15 31 21 26 14 18 45 29 42 22 14 19 31 32 31 32 12 15 33 18 43 11 16 10 12 26 26 18 31 26 21 21 46 21 7 33 9 6 7 27 21 43 10 11 10 11 8 21 6 12 12 8 31 21 7 11 6 9 20 12 34 9 33 23 24 30 29 31 9 30 19 11 46 15 46 5 6 28 16 15 31 13 15 6 11 6 14 18 23 23 24 6 13 17 31 25 14 7 17 12 27 35 41 13 13 31 15 24 31 14 12 37 24 16 20 15 29 7 8 35 7 9 21 21 33 11 6 8 10 9 11 13 16 13 10 5 5 21 13 16 20 19 6 10 14 16 15 6 11 6 12 8 9 15 8 14 29 12 6 16 10 21 7 6 16 8 24 12 17 8 10 11 6 5 14 21 13 10 10 9 19 9 12 7 5 27 15 21 5 11 7 7 5 19 17 17 4 4 12 8	Open. Hide. 62 47 37 47 62 62 62 62 62 47 42 56 21 29 56 56 32 37 35 54 62 62 59 62 62 49 43 59 59 62 62 62 62 59 46 59 59 59 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 49 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 59 62 59 62 62 62 62 59 59 62 49 49 50 59 56 49 46 56 62 59 62 62 62 62 62 62 56 62 59 59 59 59 62 51 62 56 49 62 59 59 62 59 62 62 59 51 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 51 62 62 62 62 56 51 62 62 62 62 62 62 62 56 62 62 54 51 56 56 56 56 56 51 62 56 56 62 56 62 62 62 62 62 62 62 62 62 54 54 62 62 56 62 62 62 62 62 62 56 62 62 62 62 62 56 47 56 46 56 56 56 62 62 62 62 62 62 62 62 62 62 56 56 56 62 56 56 56 56 56 62 62 62 62 62 62 62 62 54 62 62 56 56 56 56 46 32 56 56 62 62 62 62 62 62 54 62 47 41 62 62 62 62 54 52 52 52 52 62 31 62 54 42 52 54 52 43 52 52 62 52 54 52 62 62 58 58 54 47 58 52 52 52 42 50 52 46 50 46 48 42 47 52 46 50 58 54 50 58 52 52 52 52 52 48 54 58 58 52 52 44 34 52 52 52 58 54 58 54 50 52 54 52 52 52 54 58 58 52 47 52 52 35 54 30 52 52 52 52 52 46 48 54 52 52 41 41 50 35 48 50 48 50 51 50 51 52 51 50 41 24 31 34 50 35 45 40 50 49 41 41 50 49 58 58 58 58 45 25 50 47 47 42 48 58 39 31 49 42 35 31 34 42 48 51 58 52 53 58 51 46 46 34 51 25 34 42 53 53 48 42 50 39 58 52 40 51 22 24 31 34 42 53 53 51 50 50 51 51 58 50 54 50 39 50 50 44 33 34 52 42 42 38 50 50 54 50 53 41 51 41 50 46 35 46 41 34 39 29 58 49 18 15 54 38 19 54 45 42 32 53 49 50 40 45 39 40 35 51 49 50 38 51 37 33 52 39 34 44 42 37 33 54 52 53 31 42 37 49 31 46 30 39 37 54 29 35 28 33 44 52 46 19 44 32 53 33 33 49 34 46 45 54 40 52 34 19 27 22 39 29 26 32 31 33 53 32 39 33 39 41 41 28 35 42 32 45 32 42 47 37 32 32 27 32 32 26 21 11 28 26 25 27 30 42 45 34 45 41 22 32 41 21 31 32 49 49 27 31 31 27 31 23 32 45 30 29 40 34 31 23 29 26 20 32 16 23 22 29 29 31 31 51 51 31 31 40 24 32 27 33 25 28 31 31 25 43 25 27 31 31 31 31 30 30 27 30 19 26 46 31 30 32 21 22 14 33 35 24 35 31 22 32 14 47 21 25 31 31 32 30 24 16 35 31 34 32 22 17 31 34 34 37 38 38 33 42 31 22 18 29 21 30 21 25 11 48 37 23 36 29 22 24 27 27 10 32 19 21 25 22 19 22 27 20 14 21 22 33 36 28 13 17 10 21 25 16 21 24 32 32 18 17 13 18 27 20 36 14 25 7 7 25 14 16 24 32 23 25 12 7 10 4 4 6 24 16 20 31 25 15 13 18 21 24 15 12 33 37 15 13 7 31 6 29 9 30 15 16 43 8 30 11 13 32 29 11 23 19 16 6 4 9 9 14 9 11 6 10 23 9 6 6 21 9 21 13 5 8 7 18 8 13 14 38 34 47 40 34 34 40 32 34 28 28 10 7 17 28 20 19 24 6 5 8 9 8 21 30 11 11 11 7 27 26 8 3 5 13 10 6 7 7 16 28 15 12 9 14 13 18 3 1 2 5 5 2 4 18 6 4 3 3 4 5 4 5 5 4 6 1 2 4 7 12 6 4 4 5 20 6 10 5 6 6 17 11 6 3 5 8 10 22 8 15 5 8 4 3 4 10 11 3 6 8 7 10 4 6 17 16 8 6 9 16 5 22 4 7 7 21 6 8 2 2 7 14 7 3 4 3 3 3 6 7 16 2 5 4 4 8 5 5 9 15 2 4 4 5 2 3 2 8 8 11 10 6 15 5 4 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_61576222_61577325
seq2: B6Ng01-348C16.b_47_1169

seq1  GAATTCACGTGTATGGAAGAGGCAGCACCGGTTCCTGGGGTTGAGATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGTGTATGGAAGAGGCAGCACCGGTTCCTGGGGTTGAGATGGC  50

seq1  TCCCAGTTCAAGTCTCTACTTGAACAACCTCTGTTGTAAGCTTTGCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTTCAAGTCTCTACTTGAACAACCTCTGTTGTAAGCTTTGCAGTG  100

seq1  TTTGGCGAGGGCTCAGAGAACCTTGGTTCCCCTAACCTGTATCATAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCGAGGGCTCAGAGAACCTTGGTTCCCCTAACCTGTATCATAAAAG  150

seq1  AGAACACTGGTCCACTATACTATATTTGTGAATCAAGTGTTTCAGGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTGGTCCACTATACTATATTTGTGAATCAAGTGTTTCAGGACTT  200

seq1  TTACAATGTTCCATTTTATGGAGCTGCAGGGTGAGGACCTGGGTACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATGTTCCATTTTATGGAGCTGCAGGGTGAGGACCTGGGTACAGAG  250

seq1  CTCCACAGTAAAGTCTTGCCATGCAAGCATAAAGACCTGAGTTCAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGTAAAGTCTTGCCATGCAAGCATAAAGACCTGAGTTCAATCCT  300

seq1  CAGGACCCATAAAAAAGCCAGGTGTGATGGAACAAACACACTTGTAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCATAAAAAAGCCAGGTGTGATGGAACAAACACACTTGTAATCC  350

seq1  CAGTGCCAAAGACACAGAGGCAGGTAGAACCCTGGGCTCACTGTCCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCAAAGACACAGAGGCAGGTAGAACCCTGGGCTCACTGTCCAGCT  400

seq1  AGCCCAGATGAATCAGTGGGTCCCATGCCACTGAGACCCTGTCTCAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGATGAATCAGTGGGTCCCATGCCACTGAGACCCTGTCTCAAACA  450

seq1  TACACATGCATGTACACACACACACACACACACACACACACACACAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATGCATGTACACACACACACACACACACACACACACACACAGAGA  500

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTGATTTTAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTGATTTTAGGGAG  550

seq1  CTTCAGGCTACACCGTGGTATTATGTAACACCCAGTAAATTCGGGCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGCTACACCGTGGTATTATGTAACACCCAGTAAATTCGGGCCTGT  600

seq1  ACCAGTCTCTCTTCAGGGAAATACAGATATTTACAGTCAGCAGGTAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCTCTCTTCAGGGAAATACAGATATTTACAGTCAGCAGGTAATTA  650

seq1  AGACAGTAAATCATCCACATGAGCTCGGGCCTCACTTGCCTCCAGTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTAAATCATCCACATGAGCTCGGGCCTCACTTGCCTCCAGTTGAA  700

seq1  TCAGACAAATCCTTCCGTTGCCATAGCTTCTTGGATGCTTTGGGATGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAAATCCTTCCGTTGCCATAGCTTCTTGGATGCTTTGGGATGGAG  750

seq1  GTGAGGGACTTGGCTTATCTGGGATCTGAAACAGCTCGTGCCCCATGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGACTTGGCTTATCTGGGATCTGAAACAGCTCGTGCCCCATGAGG  800

seq1  CTACAGGATGTATCGAATGATATAGGCACAGCACTCCTGAGTTTTGCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGATGTATCGAATGATATAGGCACAGCACTCCTGAGTTTTGCTAG  850

seq1  TGTGATTTTGTTGTTGTTGTTGTTTTCATTTTAGATGGTTTTATGTGTAT  900
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  TGTGATTTTGTTGTTGTTGTGGTTTTCATTTTAGATGGGTTTATGTGTAT  900

seq1  AAGTGTCTTGCCTGCATGGTACATGCACTGTGTACACACA-GTGTGT-GC  948
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  AAGTGTCTTGCCTGCATGGTACATGCACTGTGTACACACAGGTGTGTGGC  950

seq1  AGA--GGTCCTAAGAGAGAG-TCAGA-TCCCCTAGAGCT-GGAGTTAAGA  993
      |||  | || |||||||||| ||||| |||||||||||| |||||| || 
seq2  AGAAGGTTCTTAAGAGAGAGTTCAGATTCCCCTAGAGCTGGGAGTTTAGG  1000

seq1  AT-GGTTGTAAG-TTGCTATG--TGGGTGCTGGAAACTGAG-CCTAGG-T  1037
      || ||||||||| ||||||||   ||||||||||||||||| | |||| |
seq2  ATGGGTTGTAAGTTTGCTATGGTGGGGTGCTGGAAACTGAGTCTTAGGTT  1050

seq1  CCTCTGCAAGAACAACAAGT-GCTTGGCTTCT-GAGTC-TTCTCTCAAGC  1084
      |||||||| ||||||||||| | ||||||||| ||||| ||||||| |||
seq2  CCTCTGCAGGAACAACAAGTGGTTTGGCTTCTGGAGTCTTTCTCTCTAGC  1100

seq1  CAT--CTCCCCCA-CCTTTTAAA  1104
      |||   ||||||| | |||||||
seq2  CATTCTTCCCCCAGCATTTTAAA  1123

seq1: chr9_61707955_61709101
seq2: B6Ng01-348C16.g_66_1215 (reverse)

seq1  CTCTGGTTGAAATTGCTACCA-CCTCCTTCACAGATCAAGCCCTCTTGA-  48
      ||||| ||  || |||||||| ||||||   ||||||||||| |||||| 
seq2  CTCTGATTTGAA-TGCTACCACCCTCCTCACCAGATCAAGCCTTCTTGAG  49

seq1  GTTTCAAGCAGGAATATGAAGGACACTT-GCTCTTATGTCAACTATGACA  97
      ||||| |||| |||||||| |||||||| |||||||| ||||||||||||
seq2  GTTTCCAGCAAGAATATGAGGGACACTTGGCTCTTATTTCAACTATGACA  99

seq1  CTTCAAGTTGCACATAGCAGCACACAAACAGCTCAAACTCACTGAAAT--  145
      || |||| ||||||||||||||||||||||||||||||||||||||||  
seq2  CTCCAAG-TGCACATAGCAGCACACAAACAGCTCAAACTCACTGAAATAA  148

seq1  -AAAAAAAAAATGTTGTATGCCTGAGCAAGCCTGGTTTCTAACT-CCAGC  193
       |||||||||||||||||||| ||||| |||||||||||||||| |||||
seq2  AAAAAAAAAAATGTTGTATGCTTGAGC-AGCCTGGTTTCTAACTCCCAGC  197

seq1  TCC-TGCCCACTTTGGGTGGGAACCGCCCAGCAAACCTCTTAGACACAGT  242
      ||| ||||||||||||||||| |||||||||| |||||||||||||||||
seq2  TCCTTGCCCACTTTGGGTGGG-ACCGCCCAGC-AACCTCTTAGACACAGT  245

seq1  GTCCTCTAGTGGTCACTTCTGGTCTTACACCCTCTGCAATAGCTAGCTTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTAGTGGTCACTTCTGGTCTTACACCCTCTGCAATAGCTAGCTTG  295

seq1  GTAGGATCAGGAAATCAACTAAGGTCTTTGAGCAGATAAGTCTATGAGAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATCAGGAAATCAACTAAGGTCTTTGAGCAGATAAGTCTATGAGAG  345

seq1  CATTTCTGAGAAGGATTGACAGAGGAGAGAAAAGACACTCCTAGAGTGGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGAGAAGGATTGACAGAGGAGAGAAAAGACACTCCTAGAGTGGG  395

seq1  TGGCGCCCAGATATGAGGCTGATGTTGAGGGGAGAGCAATGATGCTCATT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCCCAGATATGAGGCTGATGTTGAGGGGAGAGCAATGATGCTCATT  445

seq1  TGCCTGCCTTGCTTCCTGTTGATGAGCACATCTACCTCGACATCCTCCCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTTGCTTCCTGTTGATGAGCACATCTACCTCGACATCCTCCCT  495

seq1  GAAGCCACCTATTGCTGATGTCAGAACCCAGCTTATTGGGTCTTCTGATA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACCTATTGCTGATGTCAGAACCCAGCTTATTGGGTCTTCTGATA  545

seq1  TGGTCTGAAGACCAGTGGCTCTCCAGGAATCCCCCAGGCAGTCCAGGCCA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGAAGACCAGTGGCTCTCCAGGAATCCCCCAGGCAGTCCAGGCCA  595

seq1  GATGAGTGCTGGGACATGCAGCCTCGTAGATTGAGCAGCCAATAGGCAGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTGCTGGGACATGCAGCCTCGTAGATTGAGCAGCCAATAGGCAGA  645

seq1  CAGTTTTGTCTTTTGTAGTATCCGTTCCATCATCCGTTCAGTTCCTCCTC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGTCTTTTGTAGTATCCGTTCCATCATCCGTTCAGTTCCTCCTC  695

seq1  AGCTTCCCATCCTTCAGAGAGGGAGCGATCTCATTCCAAGACGTGACTTA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCCATCCTTCAGAGAGGGAGCGATCTCATTCCAAGACGTGACTTA  745

seq1  CTCTCTTTGGGTCATATGACCATCCAGAATCAACCACCTTGGCCAGGGGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTGGGTCATATGACCATCCAGAATCAACCACCTTGGCCAGGGGA  795

seq1  ATCTCTGATTAGCTGGGTCTGAATTCTACCTCACAGCTCTGCACAAGGGA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGATTAGCTGGGTCTGAATTCTACCTCACAGCTCTGCACAAGGGA  845

seq1  TGAAGTCACAATGCCTGAGAGTGGGTCCAAATGAAGCTCTCCTGACAAGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCACAATGCCTGAGAGTGGGTCCAAATGAAGCTCTCCTGACAAGA  895

seq1  GAAATCAGAGAACGGTGAACACAAGAACCAAGTGATACCCAATGGCTCCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGAGAACGGTGAACACAAGAACCAAGTGATACCCAATGGCTCCA  945

seq1  TCGGTGACAAACACAACCATGTCATGGGACACAGTCAAATGACATTCCTA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGACAAACACAACCATGTCATGGGACACAGTCAAATGACATTCCTA  995

seq1  ACCTAAAAAAGGGCTCAGTGCATCTGCCAACCGCTGATATCAGCTCAGCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAAAAGGGCTCAGTGCATCTGCCAACCGCTGATATCAGCTCAGCA  1045

seq1  ATGGTAATCTTGGTGGGTTAGGACATATTGTTTATCTTTAAAAACTAGAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATCTTGGTGGGTTAGGACATATTGTTTATCTTTAAAAACTAGAA  1095

seq1  ATTCTAAACATCAGAAGCTCTGGTAAGTGGGAGCCCTGACAGTCCTCAAG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAACATCAGAAGCTCTGGTAAGTGGGAGCCCTGACAGTCCTCAAG  1145

seq1  AATTC  1147
      |||||
seq2  AATTC  1150

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Alignment Information