BAC Information

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BAC

Clone NameB6Ng01-348H10
Chromosome9 (Build37)
Map Location 107,210,544 - 107,210,652
singlet/doubletsinglet
Overlap genenone
Upstream geneWdr51a, Dusp7, Rpl29, Acy1, Abhd14a, Abhd14b, Pcbp4, Parp3, Rrp9, Iqcf1, Iqcf5, Iqcf3, Iqcf4, LOC100041096, Grm2, Tex264, Rad54l2, LOC100041128, Vprbp, Armet, Dock3, Mapkapk3, Cish
Downstream geneHemk1, 6430571L13Rik, Cacna2d2, Tmem115, Cyb561d2, Tusc4, Zmynd10, Rassf1, Tusc2, Hyal2, Hyal1, Nat6, Hyal3, Ifrd2, BY080835, Sema3b, Gnai2, Slc38a3, Gnat1, Sema3f, Rbm5, Rbm6, Mon1a, Mst1r, 4921517D21Rik, Camkv, Traip, Ube1l, D330022A01Rik, 6230427J02Rik, 1700021K14Rik, Ihpk1, Gmppb, Rnf123, Amigo3, Mst1, Apeh, Bsn, LOC100042108, Dag1, Nicn1, EG434437, Tcta, Rhoa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348H10.bB6Ng01-348H10.g
ACCGA129753GA129754
length1,207109
definitionB6Ng01-348H10.b B6Ng01-348H10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggtttttttgttattccagac
aaatttgcaaattgctccttccaatttcgttgaagaattgagttggaatt
ttgatggggattgcattgaatctgtagattgcttttggcaagatagccat
ttttacaatgttgatcctgccaatccattgagcatgggagatcttccatc
ttctgagatcttcttttaatttctttctcagagattgaagtttttatcat
acagattcttttcacctccttagttaggagtcacggccaagatattttat
attattttgtgactaatggaagaagggtgttgttccctaatttctttcct
cagcctgttaattctttgtatagaagaaagggccatggacttgtttgagt
ttatttttatattccagcttacttcaccgagctgttattcagttaaggaa
tttccttggttggaattttagggtcacttattttcttacctaatctatcc
gcaaaatggaaattttgaattcctcttaccagttgtgatctacccctgag
actctct
tgcggtgatgtcacttggcttgcctagacccgaacaaatcatccctctga
gatcccctgaggtccccagcatgccgggtgggtgatggagctgggagtgg
gggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_107210544_107210652
seq2: B6Ng01-348H10.g_74_182 (reverse)

seq1  CCCCCACCCCCACTCCCAGCTCCATCACCCACCCGGCATGCTGGGGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCCACTCCCAGCTCCATCACCCACCCGGCATGCTGGGGACCT  50

seq1  CAGGGGATCTCAGAGGGATGATTTGTTCGGGTCTAGGCAAGCCAAGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGATCTCAGAGGGATGATTTGTTCGGGTCTAGGCAAGCCAAGTGAC  100

seq1  ATCACCGCA  109
      |||||||||
seq2  ATCACCGCA  109