BAC Information

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BAC

Clone NameB6Ng01-349N18
Chromosome9 (Build37)
Map Location 5,761,508 - 5,762,171
singlet/doubletsinglet
Overlap genenone
Upstream geneGria4, EG664889, Casp1, Casp4, Casp12
Downstream geneLOC547033, LOC100039361, LOC100039372, LOC664957, LOC676037, Pdgfd, Ddi1, EG664919, LOC100039400, LOC100039418
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349N18.g
ACCGA130720
length1,046
definitionB6Ng01-349N18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacccaacatgcctatctccactttcacatggctttttcgggtc
gacgttccacccctgttaaacttatagaagaccagattgtgagtttggac
aacatttggacacatgggttttttaaggatgacacttgcattttgtaatt
ttgatattttgtggtgtgtatccccctcaattttttaaaaagaaaagcat
ctactcacacactgaaattaattttctacaaaataccttagtcattattt
ttcaatgaatgttccttagaggtgactccaacaaaacaaaacatttgcaa
tgattattaaaagtgcagaagctgatgtagaggcaatcttggtggagggt
cctaaggaccacagagggctctccacactgcaggcatcctagaacaccta
ggtccttgagatcactggtgagtggaatgcaacatcaattccaaaaatcc
cagagggtcttctgctagcagcaacaggtcaaaggacaaaggcaggccct
agcacacccagaatcttgatatcacttagaacagtctacacaggagagca
cttgggcagcagaagcaacaaagcatcttggacagggtccctttgggcct
tcatccttaccaatagacagagctgagacccagatccctggacaccttac
ctgccagagtcggtctccagggagggctctgaccccaggaatcagtggtg
aagctgagctcaagacttctgtgtaccttccctgcaagaggagagcttac
atgcagaaagtgttctgaccactggggcacaggagagagttggtctccca
ggagtgctaacagaggttaaagagtcataggaggaacaagctccagccag
agacagctagaacatctaacaccagagattaccagatggcgaaaggcaaa
tgaaagaatcttactaacagtaaccaggaccactggcatcatcagaaccc
tgtacacccaccagaggagagtcctagataccacaacacacctgaaaagc
aagattaagatttaaaatcatatctaatgattgctggtagaggatt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_5761508_5762171
seq2: B6Ng01-349N18.g_234_897

seq1  TATCCCCCTCAATTTTTTAAAAAGAAAAGCATCTACTCACACACTGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCCTCAATTTTTTAAAAAGAAAAGCATCTACTCACACACTGAAAT  50

seq1  TAATTTTCTACAAAATACCTTAGTCATTATTTTTCAATGAATGTTCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCTACAAAATACCTTAGTCATTATTTTTCAATGAATGTTCCTTA  100

seq1  GAGGTGACTCCAACAAAACAAAACATTTGCAATGATTATTAAAAGTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGACTCCAACAAAACAAAACATTTGCAATGATTATTAAAAGTGCAG  150

seq1  AAGCTGATGTAGAGGCAATCTTGGTGGAGGGTCCTAAGGACCACAGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGATGTAGAGGCAATCTTGGTGGAGGGTCCTAAGGACCACAGAGGG  200

seq1  CTCTCCACACTGCAGGCATCCTAGAACACCTAGGTCCTTGAGATCACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACACTGCAGGCATCCTAGAACACCTAGGTCCTTGAGATCACTGG  250

seq1  TGAGTGGAATGCAACATCAATTCCAAAAATCCCAGAGGGTCTTCTGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGAATGCAACATCAATTCCAAAAATCCCAGAGGGTCTTCTGCTAG  300

seq1  CAGCAACAGGTCAAAGGACAAAGGCAGGCCCTAGCACACCCAGAATCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACAGGTCAAAGGACAAAGGCAGGCCCTAGCACACCCAGAATCTTG  350

seq1  ATATCACTTAGAACAGTCTACACAGGAGAGCACTTGGGCAGCAGAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTTAGAACAGTCTACACAGGAGAGCACTTGGGCAGCAGAAGCAA  400

seq1  CAAAGCATCTTGGACAGGGTCCCTTTGGGCCTTCATCCTTACCAATAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCATCTTGGACAGGGTCCCTTTGGGCCTTCATCCTTACCAATAGAC  450

seq1  AGAGCTGAGACCCAGATCCCTGGACACCTTACCTGCCAGAGTCGGTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGAGACCCAGATCCCTGGACACCTTACCTGCCAGAGTCGGTCTCC  500

seq1  AGGGAGGGCTCTGACCCCAGGAATCAGTGGTGAAGCTGAGCTCAAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGCTCTGACCCCAGGAATCAGTGGTGAAGCTGAGCTCAAGACTT  550

seq1  CTGTGTACCTTCCCTGCAAGAGGAGAGCTTACATGCAGAAAGTGTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACCTTCCCTGCAAGAGGAGAGCTTACATGCAGAAAGTGTTCTGA  600

seq1  CCACTGGGGCACAGGAGAGAGTTGGTCTCCCAGGAGTGCTAACAGAGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGGGCACAGGAGAGAGTTGGTCTCCCAGGAGTGCTAACAGAGGTT  650

seq1  AAAGAGTCATAGGA  664
      ||||||||||||||
seq2  AAAGAGTCATAGGA  664