MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-350J13
Chromosome	9 (Build37)
Map Location	12,616,464 - 12,617,591
singlet/doublet	singlet
Overlap gene	LOC100039680
Upstream gene	LOC100039989, LOC622505
Downstream gene	LOC665285, LOC100039729, LOC100039758, Maml2, Mtmr2, Cep57
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039989 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs

name	LOC622505 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039680 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC665285 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665285
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100039729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Maml2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270118 MGI:2389460
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 9 Proteins

name	Mtmr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77116 MGI:1924366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cep57 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74360 MGI:1915551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039989 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259459 GeneID:100039989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs product : similar to gag polyprotein transcript_id : XM_001473790.1

name	LOC100039680 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259450 GeneID:100039680
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001473320.1

name	Maml2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259825 GeneID:270118 MGI:2389460
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 40 ESTs, 9 Proteins product : mastermind like 2 (Drosophila) transcript_id : XM_001481278.1

name	Mtmr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053953 GeneID:77116 MGI:1924366
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotubularin related protein 2 transcript_id : NM_023858.2

name	Cep57 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980864 GeneID:74360 MGI:1915551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 57 transcript_id : NM_026665.2

name	LOC100039989 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259460 GeneID:100039989
definition	codon_start : 1 product : similar to gag polyprotein protein_id : XP_001473840.1

name	LOC100039680 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259451 GeneID:100039680
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473370.1

name	Maml2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259826 GeneID:270118 MGI:2389460
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to mKIAA1819 protein protein_id : XP_001481328.1 transl_except : (pos:13415221..13415223,aa:OTHER) transl_except : (pos:13415263..13415265,aa:OTHER)

name	Mtmr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053954 CCDS:CCDS22818.1 GeneID:77116 MGI:1924366
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA] GO_process : GO:0046839 - phospholipid dephosphorylation [Evidence IEA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 product : myotubularin related protein 2 protein_id : NP_076347.2

name	Cep57 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980865 GeneID:74360 MGI:1915551
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005874 - microtubule [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0017134 - fibroblast growth factor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence ISS]; GO:0000060 - protein import into nucleus, translocation [Evidence IMP] codon_start : 1 exception : mismatches in translation note : testis-specific protein 57 product : translokin protein_id : NP_080941.2

name	LOC622505 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622505
definition	number : 1 pseudo : _no_value

name	LOC622505 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622505
definition	number : 2 pseudo : _no_value

name	LOC665285 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665285
definition	number : 1 pseudo : _no_value

name	LOC665285 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665285
definition	number : 2 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 5 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 4 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 3 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 2 pseudo : _no_value

name	LOC100039729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039729
definition	number : 1 pseudo : _no_value

name	LOC100039758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039758
definition	number : 1 pseudo : _no_value

name	LOC100039758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039758
definition	number : 2 pseudo : _no_value

name	LOC100039758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039758
definition	number : 3 pseudo : _no_value

clone name	MSMg01-527J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230H22
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-350J13.b	B6Ng01-350J13.g
ACC	GA131218	GA131219
length	1,174	1,125
definition	B6Ng01-350J13.b	B6Ng01-350J13.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttcacctttttggatgtgttttcctgtatgtctttaagggatt tttgtgtttcatctttaagggcatctgtttacctgtgtcctcctgtattt ctttaagggagttatttatgtccttcttaaagtcctccatcatcatcatg agaagtgactttagattcatgtcttgcttttcttgtgtgatggtgtatcc aggacttgctatggtgggagagttgggttctgataatgccaagtaacctt ggtttctgttgcttctgttcttatacttgtctcctgccacatgattatct caagtgctgcctgcccttgaacctgtccttcctgtaatccccgttgagtc agaactcttcagagtccagctttctctgtgatcctgtgattccagtatcc cgagattatgaaattcttggtgtttcagagttcctggaagtcaagctgcc tctgagaccctgagatcagagtgtgaccaagttcctgggattctgggatc atgagatcctaagattctgggcatgttagagtgtctgggagtggtatctt ctctggggaccatggggctgtctgctgtgttctagaccaatctttctctt gtttggttagagtcacagcaagctgaacaagtatttgaccaaattcaaca ttccttcacgataaaaatcttggaacaatcaggatttcaaggcccataac taaacatagtaaaagcaatatacagcaaaccagtagccaacatcaaacta aatggagtgacttgaagcaatcccattaaaatctgggactaaacaaggtt acccactctctccctatctattaaatatagtacttgaagttctagctaga acaattagacaacaaaaggaggtcaagggatactaattggaaaggaagaa gtcaaatattccactatttgcagatcattatgatagtataaattaagtga tcccaaaaatttccaccaccaaacttcctagatctgataaaatactccag caaagtggctctgattataaaattaaccaaaaaaaaatcccttagccctt cttatatccaaagaatagaaggcgataagaattagtatgataccccacac tagcttatttattagatctatttcatgtaagtcaggtgctttgctaaact gcaattttcgtcggatcttatata	gaattctgggtatacacctaatagtctcaaatggaaaaaaaaaaaaatct atttctgtattactttctagagccagggcttctcacttcccaatgaggct ggcttaataataaaataagattttgttaagaaatttgcatttctccatgt gtaattttaggtttcactaaacagaaaacacactactgtaaacaatgctt tataaacatgtgagaacaggcaatgagcagagcctttgtaaattcctccc ccacaacacacatgaatgcacatgctgcttttatcttatctctttataaa atataaaactgcccaagcaaatattaaagcaatataaaaatagaacattc tctataggtccaaatttatgtatttcaggtaatgtgtacactcttttaat gaatatatttaatcctattaccatggatgcatgaaactaatatgggattt cacttaatggaaagaaccaaacagatctgaaatctcctctaaacttactg ttacccaaacatcatgtaacagctatgttcttggtataaggacatagcaa catgagagaagggagggaataaagtaattaatcatgatgagatggaggga tgatagtgatcacaatactggaagatcattattgagtacttagagagcca caactcacctgtaagcacatcccttactttatacaaatattactttgtga gaagagaacacactactttgtttcataaaaccctttgattaattttatgg gctaaaatccatggatactatcttcaattccagtttaagtactaatgtct acaggcaaaatatatctaaatattatctatattaggtttcaagtgtgtat ttgggttcagctaattttcaatattcttttgttcatgggcataaggaaca ggtatcatttttactgaaaaggttaccaaacaacctgtcctaggaaacaa gattttttccatgacataactgtcataataaagtgtgtcactttttaaac tctggaaaggttctaggaatatccacagaagaggaggggatgtcagagca gaacaataggagtgctatggatgctatcttctagaatgagtgactgttac atacaactacacaactggtgactac
quality values	Open. Hide. 49 38 19 25 58 58 58 58 58 29 12 40 49 58 62 62 62 62 62 49 41 41 35 47 49 62 62 56 33 62 37 8 11 20 8 13 14 10 21 31 25 32 35 43 49 62 62 59 38 49 62 62 62 49 59 59 62 62 62 59 46 62 62 62 62 59 62 62 62 62 15 13 11 10 16 13 10 10 10 28 34 23 25 34 50 46 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 24 23 12 21 18 13 18 54 54 42 49 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 56 50 36 25 43 56 62 62 44 56 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 43 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 54 47 49 62 62 62 62 62 49 47 47 56 62 62 62 62 62 62 62 62 62 54 54 62 49 62 62 62 62 62 62 62 62 62 62 49 41 62 62 62 62 62 62 54 62 62 62 62 62 62 62 49 47 54 58 58 58 58 52 45 38 58 58 58 58 58 58 54 52 58 58 54 54 54 54 58 58 54 58 58 54 58 58 58 58 58 49 58 58 54 50 52 54 52 58 58 52 58 52 58 54 58 58 58 42 37 45 52 58 58 58 58 54 52 58 58 47 54 58 58 52 58 58 52 58 53 53 53 50 49 51 51 30 48 52 54 51 53 58 58 54 51 53 53 51 49 58 32 58 47 58 41 32 42 37 51 58 51 50 50 50 54 50 53 54 58 39 50 47 58 50 51 54 43 50 51 52 52 40 41 58 43 33 50 50 49 33 58 50 52 58 40 27 52 39 39 50 54 42 51 50 49 42 35 41 50 54 52 52 58 58 58 50 52 53 53 53 58 42 53 40 52 50 25 49 39 29 20 58 26 19 54 38 34 27 51 49 54 16 26 39 35 51 39 47 39 53 39 49 40 53 27 50 25 40 45 43 54 54 51 37 32 12 52 53 39 45 37 53 31 53 42 40 40 35 29 44 31 37 42 45 32 52 49 14 42 44 17 53 40 27 49 40 45 52 28 54 37 33 49 35 53 34 37 52 31 39 39 28 29 27 33 32 45 26 33 34 33 40 52 25 53 53 32 52 52 26 30 31 40 43 53 33 15 16 28 15 51 14 32 12 34 45 51 23 30 31 34 46 46 24 34 42 31 31 32 37 31 51 42 33 36 37 42 34 36 31 24 31 51 36 30 31 30 30 33 24 35 43 30 42 31 31 46 32 33 27 11 31 31 30 43 32 18 30 23 46 35 27 31 34 46 32 36 31 27 18 26 42 14 48 46 33 25 31 14 14 20 32 23 46 32 20 32 27 25 27 16 26 31 27 24 29 29 32 25 18 31 25 22 25 33 30 19 31 25 24 23 32 30 46 46 21 8 6 7 7 8 10 31 19 28 33 44 33 25 17 27 21 19 19 28 22 19 9 17 21 25 32 28 34 38 16 30 32 14 44 28 36 17 20 23 30 22 37 19 19 30 38 21 22 41 41 38 27 17 44 14 22 32 15 32 33 13 24 19 13 33 25 25 19 17 16 25 11 17 17 33 32 17 8 10 24 21 14 34 43 18 21 31 14 15 16 37 19 13 21 12 34 20 32 9 7 25 11 11 14 14 19 10 11 10 11 24 13 40 40 25 13 18 8 23 18 18 9 28 21 19 15 29 16 16 5 3 8 33 27 13 13 22 18 14 28 7 26 16 17 20 27 16 17 20 6 9 7 20 18 15 5 10 8 6 16 5 4 9 8 17 16 7 28 6 11 13 9 8 5 11 17 3 4 1 4 2 5 6 12 5 18 25 26 24 3 3 6 22 20 16 20 19 24 9 8 10 25 8 18 5 8 8 19 6 17 21 16 16 22 28 4 18 5 22 3 1 3 19 12 10 11 4 17 7 5 11 8 5 25 11 10 12 7 8 4 17 5 13 16 5 1 2 5 8 16 24 4 2 3 5 4 4 17 4 11 14 7 6 2 3 3 7	Open. Hide. 62 59 44 43 62 62 59 62 62 62 56 54 59 59 54 56 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 56 54 56 62 59 59 59 54 42 56 56 56 62 62 62 62 62 62 62 59 59 56 62 59 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 59 59 59 48 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 62 59 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 59 62 62 62 59 59 51 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 51 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 52 62 52 54 62 54 54 58 58 58 58 58 58 58 58 58 58 45 58 58 58 58 58 58 54 58 54 58 58 58 58 58 52 58 54 54 54 41 52 54 54 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 52 58 58 58 54 58 58 58 58 58 58 58 58 58 51 50 54 58 53 54 58 58 58 54 58 58 58 58 51 51 53 49 58 58 58 48 51 47 58 51 49 58 51 51 58 50 54 58 58 51 58 50 58 49 51 58 58 54 39 58 54 58 47 41 58 58 58 50 52 53 41 39 58 58 52 58 54 52 51 58 51 49 58 58 51 39 32 58 58 54 39 58 58 40 37 58 39 33 54 52 53 58 49 41 51 37 51 39 51 51 50 43 54 58 49 58 51 40 46 29 42 37 50 53 53 38 47 53 53 39 45 32 42 50 53 53 37 52 42 53 40 39 54 31 50 39 49 51 54 49 42 51 50 41 51 40 37 51 35 52 30 51 32 52 45 47 38 47 52 37 37 46 54 51 42 39 37 47 38 33 42 42 38 39 42 52 45 44 49 54 41 37 44 33 25 51 40 32 47 31 53 41 32 34 47 43 38 32 45 35 47 51 51 32 26 49 36 35 32 32 23 46 40 36 27 32 32 31 47 40 36 34 31 33 31 32 32 51 51 31 37 31 37 51 33 31 36 39 51 46 31 31 39 43 32 30 43 42 27 31 33 43 35 38 30 31 30 31 33 19 41 31 31 29 38 31 23 26 47 31 31 32 31 34 30 37 34 31 26 37 41 24 43 36 31 31 22 42 31 23 28 46 46 31 31 31 31 31 32 30 31 31 46 27 31 26 26 38 33 31 36 38 32 31 31 32 38 41 41 38 14 32 31 30 25 20 31 21 41 23 26 18 27 30 46 36 18 46 11 27 27 31 35 28 36 30 28 25 31 48 46 31 31 25 26 31 31 26 33 32 26 48 48 37 31 7 30 18 18 16 9 44 23 19 16 13 15 7 8 5 30 14 20 9 17 17 22 28 38 28 28 38 48 48 44 31 18 29 24 34 17 44 36 11 19 21 19 21 23 12 23 16 31 27 18 17 14 9 19 13 17 7 22 30 14 14 13 25 32 39 20 12 8 30 19 29 14 39 43 34 43 19 19 22 21 14 33 34 13 10 8 5 6 8 26 32 23 18 8 8 19 19 24 27 34 24 24 11 22 13 14 16 21 11 6 19 30 40 38 17 21 28 11 3 5 15 8 11 4 3 13 8 13 9 7 11 24 13 10 16 5 5 8 7 10 8 14 10 6 10 5 12 24 16 6 9 3 7 19 21 47 33 9 30 10 5 3 10 10 24 22 5 22 4 12 22 5 7 12 17 12 11 5 5 6 4 6 23 20 21 16 16 11 9 2 5 23 21 21 7 5 15 14 8 19 7 4 8 15 23 16 21 6 4 4 7 11 16 16 9 12 21 10 11 4 10 4 5 8 1 2 4 4 8 13 7 6 14 14 4 4 4 7 4 18 12 8 3 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_12616464_12617591
seq2: B6Ng01-350J13.g_68_1192

seq1  GAATTCTGGGTATACACCTAATAGTCTCAAATGGAAAAAAAAAAAAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTATACACCTAATAGTCTCAAATGGAAAAAAAAAAAAATCT  50

seq1  ATTTCTGTATTACTTTCTAGAGCCAGGGCTTCTCACTTCCCAATGAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTATTACTTTCTAGAGCCAGGGCTTCTCACTTCCCAATGAGGCT  100

seq1  GGCTTAATAATAAAATAAGATTTTGTTAAGAAATTTGCATTTCTCCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAATAATAAAATAAGATTTTGTTAAGAAATTTGCATTTCTCCATGT  150

seq1  GTAATTTTAGGTTTCACTAAACAGAAAACACACTACTGTAAACAATGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTAGGTTTCACTAAACAGAAAACACACTACTGTAAACAATGCTT  200

seq1  TATAAACATGTGAGAACAGGCAATGAGCAGAGCCTTTGTAAATTCCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACATGTGAGAACAGGCAATGAGCAGAGCCTTTGTAAATTCCTCCC  250

seq1  CCACAACACACATGAATGCACATGCTGCTTTTATCTTATCTCTTTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACACACATGAATGCACATGCTGCTTTTATCTTATCTCTTTATAAA  300

seq1  ATATAAAACTGCCCAAGCAAATATTAAAGCAATATAAAAATAGAACATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAACTGCCCAAGCAAATATTAAAGCAATATAAAAATAGAACATTC  350

seq1  TCTATAGGTCCAAATTTATGTATTTCAGGTAATGTGTACACTCTTTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGGTCCAAATTTATGTATTTCAGGTAATGTGTACACTCTTTTAAT  400

seq1  GAATATATTTAATCCTATTACCATGGATGCATGAAACTAATATGGGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATTTAATCCTATTACCATGGATGCATGAAACTAATATGGGATTT  450

seq1  CACTTAATGGAAAGAACCAAACAGATCTGAAATCTCCTCTAAACTTACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAATGGAAAGAACCAAACAGATCTGAAATCTCCTCTAAACTTACTG  500

seq1  TTACCCAAACATCATGTAACAGCTATGTTCTTGGTATAAGGACATAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAAACATCATGTAACAGCTATGTTCTTGGTATAAGGACATAGCAA  550

seq1  CATGAGAGAAGGGAGGGAATAAAGTAATTAATCATGATGAGATGGAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAGAAGGGAGGGAATAAAGTAATTAATCATGATGAGATGGAGGGA  600

seq1  TGATAGTGATCACAATACTGGAAGATCATTATTGAGTACTTAGAGAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTGATCACAATACTGGAAGATCATTATTGAGTACTTAGAGAGCCA  650

seq1  CAACTCACCTGTAAGCACATCCCTTACTTTATACAAATATTACTTTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCACCTGTAAGCACATCCCTTACTTTATACAAATATTACTTTGTGA  700

seq1  GAAGAGAACACACTACTTTGTTTCATAAAACCCTTTGATTAATTTTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAACACACTACTTTGTTTCATAAAACCCTTTGATTAATTTTATGG  750

seq1  GCTAAAATCCATGGATACTATCTTCAATTCCAGTTTAAGTACTAATGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATCCATGGATACTATCTTCAATTCCAGTTTAAGTACTAATGTCT  800

seq1  ACAGGCAAAATATATCTAAATATTATCTATATTAGGTTTCAAGTGTGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAAATATATCTAAATATTATCTATATTAGGTTTCAAGTGTGTAT  850

seq1  TT-GGTTCAGCTAATTTTCAATATTCTTTTGTTCAT-GGCATAAGGAACA  898
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGGGTTCAGCTAATTTTCAATATTCTTTTGTTCATGGGCATAAGGAACA  900

seq1  GGTATCATTTTTACTG-AAAGGTTACCAAACAACCCTGTCCTAGGAAACA  947
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  GGTATCATTTTTACTGAAAAGGTTACCAAACAA-CCTGTCCTAGGAAACA  949

seq1  AGA-TTTTTCCATGACAT-ACTGTCATAATAAAGTGTGTCACTTTTTAAA  995
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGATTTTTTCCATGACATAACTGTCATAATAAAGTGTGTCACTTTTTAAA  999

seq1  CCCTGGAAAGG-TCTAGGGAATAT-CACAGAAGAAGGAGGGGAATGGCCA  1043
      | ||||||||| |||| ||||||| |||||||| |||||||||   | ||
seq2  CTCTGGAAAGGTTCTA-GGAATATCCACAGAAG-AGGAGGGGA--TGTCA  1045

seq1  GAGCCAGACAATAAGGAGTGCTATGGGATGCTATCTTCTAGAATGAGTGA  1093
      ||||   ||||| ||||||||||| |||||||||||||||||||||||||
seq2  GAGCAGAACAAT-AGGAGTGCTAT-GGATGCTATCTTCTAGAATGAGTGA  1093

seq1  CTGTTACATTACAAACATACAACAACT-GTGACTAC  1128
      |||||||| |||||   ||| |||||| ||||||||
seq2  CTGTTACA-TACAA--CTAC-ACAACTGGTGACTAC  1125

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information