Query= MSMg01no046_e05.b1 MSMg01no046_e05.b1 CHROMAT_FILE:
MSMg01no046_e05.b1 PHD_FILE: MSMg01no046_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:23 2005
(469 letters)
>mm_chr9_4575414_4576282
Length = 869
Score = 830 bits (429), Expect = 0.0
Identities = 438/441 (99%)
Strand = Plus / Minus
Query: 6 gaattcttggtggggtcctggggaaagaactgggtttcttacttctgtggtatttcacat 65
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaattcttggtgggatcctagggaaagaactgggtttcttacttctgtggtatttcacat 382
Query: 66 tgtccctgttattgactacagtatctggaacttcagctgggatcatcattttccagttgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtccctgttattgactacagtatctggaacttcagctgggatcatcattttccagttgg 322
Query: 126 gcaacctcatatctcatgcccaaactcaagatacagctaagtgcttaaactaatttctcc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaacctcatatctcatgcccaaactcaagatacagctaagtgcttaaactaatttctcc 262
Query: 186 aatataaaatctgatgcatccagttaaaccacttttatattttataagtatctgtcttga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatataaaatctgatgcatccagttaaaccacttttatattttataagtatctgtcttga 202
Query: 246 ttctagcttctccagtggtcaatacatagctttcagctatttctgcttgtctccatacgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctagcttctccagtggtcaatacatagctttcagctatttctgcttgtctccatacgt 142
Query: 306 ccttacttttccatctgctttctggcttccaatattttgttcacatctctaatttgttct 365
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ccttacttttccatctactttctggcttccaatattttgttcacatctctaatttgttct 82
Query: 366 tataaatcctctaattttctgtgattttatgatcattatctctctgcaatattatttcag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tataaatcctctaattttctgtgattttatgatcattatctctctgcaatattatttcag 22
Query: 426 ttggatttctggaggaagtaa 446
|||||||||||||||||||||
Sbjct: 21 ttggatttctggaggaagtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_e05.g1 MSMg01no046_e05.g1 CHROMAT_FILE:
MSMg01no046_e05.g1 PHD_FILE: MSMg01no046_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:23 2005
(522 letters)
>mm_chr9_4443238_4444163
Length = 926
Score = 980 bits (507), Expect = 0.0
Identities = 519/525 (98%), Gaps = 4/525 (0%)
Strand = Plus / Plus
Query: 1 tctaagaggctgtttttttgttttttgtctttctggttttttttgtttgtttgttttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaagaggctgtttttttgttttttgtctttctggttttttttgtttgtttgttttgtt 260
Query: 61 ttgttttgattgaacaagttagatactggagattattag----tttttttttttatatat 116
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 261 ttgttttgattgaacaagttagatactggagattattagtttttttttttttttttatat 320
Query: 117 ctttttgagaaccaacttcaaccatggcaaagtcttcctttggtggatttattatctaca 176
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 ctttttgagaaccaacttcaaccatggcaaagacttcctttggtggatttattatctaca 380
Query: 177 tctgtgtactttcctcacctaaatcagaatttatcctatttttcacaaaaacttaaatgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgtgtactttcctcacctaaatcagaatttatcctatttttcacaaaaacttaaatgt 440
Query: 237 aggtgcaaacttgagtcctatgtggatatttttaatatactttagctttatcagtattgg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtgcaaacttgagtcctatgtggatatttttaatatactttagctttatcagtattgg 500
Query: 297 caaactgaggcaaagaaagacttttaaaaatctactgttatttctcagagtaaactatat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaactgaggcaaagaaagacttttaaaaatctactgttatttctcagagtaaactatat 560
Query: 357 tcttacttaaaaatacaattaaaaaaaggtcttttcccataagagcactggagaaaggag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttacttaaaaatacaattaaaaaaaggtcttttcccataagagcactggagaaaggag 620
Query: 417 tcagaagacatcagttgtaacctaagctgggaaactctgggcaagtcacttaacccttat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcagaagacatcagttgtaacctaagctgggaaactctgggcaagtcacttaacccttat 680
Query: 477 tcgcagcgtcatccccacaaaagagaattagaagtatatacgttt 521
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcgcagcgtcatccccacaaaagagaattagaagtatatacgttt 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 926
Length adjustment: 10
Effective length of query: 512
Effective length of database: 916
Effective search space: 468992
Effective search space used: 468992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
