Query= MSMg01no047_o20.b1 MSMg01no047_o20.b1 CHROMAT_FILE:
MSMg01no047_o20.b1 PHD_FILE: MSMg01no047_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:21 2005
(307 letters)
>mm_chr9_67738916_67739622
Length = 707
Score = 489 bits (253), Expect = e-143
Identities = 286/303 (94%), Gaps = 11/303 (3%)
Strand = Plus / Minus
Query: 5 gaattctaaacacaatgtcgcggggagtatccataagacaagcaggaaaatattacaagc 64
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
Sbjct: 668 gaattctaaacacaatgt-ggggggagtatccataagacaagcaggaaaatattacaaac 610
Query: 65 agctcttcattagagggccgaaaactacagacatcattctagagaagggaaatatgggca 124
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 609 agctcttcattagagggaagaaaactacagacatcattcaagagaagggaaatatgggca 550
Query: 125 aaggtcagagagagagagagagagagagagagagagagagagagagagagagcacgcaat 184
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaggtc----------agagagagagagagagagagagagagagagagagagcacgcaat 500
Query: 185 gagcacacacaatatgcgactcactgacactccccatctcccccaaatcatctccagagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gagcacacacaatatgcgactcactgacactccccatctcccccaaatcatctccagagt 440
Query: 245 cagcgtaacctctaacaacacaactgcagcatgcattactgagagcacaacctgactcta 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 439 cagcgtaacctctaacaacacaacagcagcatgcattactgagagcacaacctgactcta 380
Query: 305 aca 307
|||
Sbjct: 379 aca 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 16
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_o20.g1 MSMg01no047_o20.g1 CHROMAT_FILE:
MSMg01no047_o20.g1 PHD_FILE: MSMg01no047_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:21 2005
(158 letters)
>mm_chr9_67563076_67563633
Length = 558
Score = 306 bits (158), Expect = 6e-88
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 1 agataaggagatgagggaagaagccagagaggcaggagagacccatttttggcctcacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agataaggagatgagggaagaagccagagaggcaggagagacccatttttggcctcacct 260
Query: 61 gcacctccccagccaggaatccatccactctagctgttctgggaaactcaagccacccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacctccccagccaggaatccatccactctagctgttctgggaaactcaagccacccta 320
Query: 121 agggcaatctctccacagtgaacactgtcttatcaaga 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggcaatctctccacagtgaacactgtcttatcaaga 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
