Query= MSMg01no050_h23.b1 MSMg01no050_h23.b1 CHROMAT_FILE:
MSMg01no050_h23.b1 PHD_FILE: MSMg01no050_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:53 2005
(334 letters)
>mm_chr9_98617713_98618446
Length = 734
Score = 536 bits (277), Expect = e-157
Identities = 310/323 (95%), Gaps = 7/323 (2%)
Strand = Plus / Minus
Query: 16 gaatt-cattcc-aattaatttttatcccaacatgagccactgttgttaggtcttctttg 73
||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 727 gaattccattccaaattaatttttattccaacatgagccactgttgttagatcttctttg 668
Query: 74 ttttccattcactcttatgagcccttcgtgccggcatctgttatcatctcaacacttgag 133
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 667 ttttcaattcactcttatgagcccttcgtgctggcatctgttatcatctcaacacttgag 608
Query: 134 cggtggaggcagagggaccct--agagttcaaggccaggccgggctgtgtaacaggacgc 191
||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||
Sbjct: 607 cggtggaggcagaggga---tggagagttcaaggccaggccgggctgtgtaataggacgc 551
Query: 192 tatcttaaaaacaaaaccaaacaaaaaatgcctcttgttccctagctcttctctctggaa 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tatcttaaaaacaaaaccaaacaaaaaatgcctcttgttccctagctcttctctctggaa 491
Query: 252 catttgcctctttttctgtcctttagtgaagcacatattttgtctgagcagattcttgtg 311
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 catttgcttctttttctgtcctttagtgaagcacatattttgtctgagcagattcttgtg 431
Query: 312 ctcttacccctgagtgagagtta 334
|||||||||||||||||||||||
Sbjct: 430 ctcttacccctgagtgagagtta 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_h23.g1 MSMg01no050_h23.g1 CHROMAT_FILE:
MSMg01no050_h23.g1 PHD_FILE: MSMg01no050_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:54 2005
(382 letters)
>mm_chr9_98437090_98437871
Length = 782
Score = 700 bits (362), Expect = 0.0
Identities = 377/382 (98%)
Strand = Plus / Plus
Query: 1 aaacccagtctgggctgtatagtgaggccttctctcaaaaacctaaaataattaaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacccagtctgggctgtatagtgaggccttctctcaaaaacctaaaataattaaaagga 260
Query: 61 ccgaaggaaggaaagaaggggaagaaggaagaaagaaaaagttgtagcttcacccacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 aggaaggaaggaaagaaggggaagaaggaagaaagaaaaagttgtagcttcacaaacctc 320
Query: 121 cttaatcaagcgatcaaatttaactagcacagtaatgaaagccattcagggacaccatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttaatcaagcgatcaaatttaactagcacagtaatgaaagccattcagggacaccatta 380
Query: 181 tggaattcccatccaacccagcacctccatcaaatagtaaacaaacatccaataaacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaattcccatccaacccagcacctccatcaaatagtaaacaaacatccaataaacttc 440
Query: 241 agcttacagttattcagcagtgaaattgactgatggtctttaaaagtgccaaagccaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcttacagttattcagcagtgaaattgactgatggtctttaaaagtgccaaagccaaga 500
Query: 301 aaggactgacagattggctcagagagggagccgtcgaggagtcatggaggctgaagtagc 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 aaggactgacagattggctcagagagggagccgccgaggagtcatggaggctgaagtagc 560
Query: 361 agaagagcatgctaaggagaac 382
||||||||||||||||||||||
Sbjct: 561 agaagagcatgctaaggagaac 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
