Query= MSMg01no051_k13.b1 MSMg01no051_k13.b1 CHROMAT_FILE:
MSMg01no051_k13.b1 PHD_FILE: MSMg01no051_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:39 2005
(439 letters)
>mm_chr9_87858782_87859620
Length = 839
Score = 797 bits (412), Expect = 0.0
Identities = 430/436 (98%)
Strand = Plus / Plus
Query: 1 aattccagtattcctctcccctttcccaagcccacgttagatcaaaagcagaacgctgat 60
||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 201 aattccagtattcctcttccctttcccaagcccatgttagatcaaaagcagaatgctgat 260
Query: 61 aataaagaggaacactgcacccagtgtccccctaccaatggcaacagaaaccccatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataaagaggaacactgcacccagtgtccccctaccaatggcaacagaaaccccatggag 320
Query: 121 aagaggtaccccaacatttgctgtcagagatgttagccaaagtcttcaagagaattacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaggtaccccaacatttgctgtcagagatgttagccaaagtcttcaagagaattacag 380
Query: 181 tcacttcctctcagggctaaattatttaagccacgaaagtctttgatctctccacattct 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tcacttcctctcagggctaaattatttaagccacgaaagcctttgatctctccacattct 440
Query: 241 cccaccactctctaacatgcagaatagtgccactattagctctagaagggccagaactga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccaccactctctaacatgcagaatagtgccactattagctctagaagggccagaactga 500
Query: 301 aatgagtatccatttatcgcatacatattataaacctaaactaagtgaaattcaaactca 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 aatgagtatccatttatcgcatacataatataaacctaaactaagtgaaattcaaactca 560
Query: 361 tggactttgggaggaaaggtatgtagtagaactgtggtttccagctactcttcagtgtag 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggactttgggaggaaagggatgtagtagaactgtggtttccagctactcttcagtgtag 620
Query: 421 ccttagaggggctgat 436
||||||||||||||||
Sbjct: 621 ccttagaggggctgat 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_k13.g1 MSMg01no051_k13.g1 CHROMAT_FILE:
MSMg01no051_k13.g1 PHD_FILE: MSMg01no051_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:39 2005
(378 letters)
>mm_chr9_87879912_87880689
Length = 778
Score = 661 bits (342), Expect = 0.0
Identities = 372/390 (95%), Gaps = 13/390 (3%)
Strand = Plus / Minus
Query: 2 tctttattatgaattacaatctgcttactgatgagttgttcgtaaaaaagtaggcctgcc 61
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 576 tctttgttatgaattacaatctgcttactgatgagttgttagtaaaaaagtaggcctgcc 517
Query: 62 gggccattattttttccacacagtacacacagttcagttttccttc-------------t 108
|||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 516 gggccattattttttccacacagtacacacagttcagttttccttctttttttttttttt 457
Query: 109 ttttttttttttttgttaagttttcattaatgcaccgagtgtgaataaatctgtttctaa 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttttttttttttttgttaagttttcattaatgcaccgagtgtgaataaatctgtttctaa 397
Query: 169 tttgtcattgttttcccttcatctggacaataatttattgccaaatctaacacttgtcca 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttgtcattgttttcccttcatctggacaataatttattgccaaatctaacacttgtcca 337
Query: 229 ttattaacatccctctaccagggacaatgttttaatttttcttcctttattttatttttc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttattaacatccctctaccagggacaatgttttaatttttcttcctttattttatttttc 277
Query: 289 ttactttcttccctcttcgactttttttttctttctatttgttattactaggagaaccaa 348
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 276 ttactttcttccctcttcgactttttttttctttctatttgttaagactaggagaaccaa 217
Query: 349 aaagttaccgcatggcagggattttgttta 378
|||||||| |||||||||||||||||||||
Sbjct: 216 aaagttacagcatggcagggattttgttta 187
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
