Query= MSMg01no052_a06.b1 MSMg01no052_a06.b1 CHROMAT_FILE:
MSMg01no052_a06.b1 PHD_FILE: MSMg01no052_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:30 2005
(664 letters)
>mm_chr9_21459465_21460528
Length = 1064
Score = 1243 bits (643), Expect = 0.0
Identities = 655/659 (99%)
Strand = Plus / Plus
Query: 5 gaattccagtgtcagctgctcagtaaacgcagggaggtcctgtaaggaaatagcattcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtgtcagctgctcagtaaacgcagggaggtcctgtaaggaaatagcattcag 264
Query: 65 tgacctcactgggaaggctatgtgagctgcgatgcctgttgtctctagatgagcagaacc 124
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 265 tgagctcactgggaaggctatgtgagctgagatgcctgttgtctctagatgagcagaacc 324
Query: 125 tggaggtaaagctcacgcattggtagggaagtcagctgtgaaactggaaagctgtttgaa 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cggaggtaaagctcacgcattggtagggaagtcagctgtgaaactggaaagctgtttgaa 384
Query: 185 ttggtagcgtgtaaaggtgtggtggctgctttggagagcatcagctacagagattcccaa 244
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttggtagcgtgtaaaggtgtgatggctgctttggagagcatcagctacagagattcccaa 444
Query: 245 gatacccttggaaagaacatgcagtctgctagggaaactaaaggcttacccagcaattca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatacccttggaaagaacatgcagtctgctagggaaactaaaggcttacccagcaattca 504
Query: 305 atgggaagggcaggaagaggcagacaccactgcattgggaaggagcatctcttcccctgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgggaagggcaggaagaggcagacaccactgcattgggaaggagcatctcttcccctgg 564
Query: 365 gattgctagggaaccaagatgacatggcacctctcttggtaggaggaggaagaggagcag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gattgctagggaaccaagatgacatggcacctctcttggtaggaggaggaagaggagcag 624
Query: 425 cctcagcccgcacagccccctacactgcctgtggaagaaaagaagaagattccagaccca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctcagcccgcacagccccctacactgcctgtggaagaaaagaagaagattccagaccca 684
Query: 485 gacagcgatgatgtctctgaggtggacgcccgacacattattgagtaaggggtccccatg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gacagcgatgatgtctctgaggtggacgcccgacacattattgagtaaggggtccccatg 744
Query: 545 tgtcctcatctgcaagctctctttaaagtggcaacagaacaagtaggcagagtccccagc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgtcctcatctgcaagctctctttaaagtggcaacagaacaagtaggcagagtccccagc 804
Query: 605 ctttcccttttcattgtgctttgtgtctgtcatgagattgtcctccctaggtggccttc 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctttcccttttcattgtgctttgtgtctgtcatgagattgtcctccctaggtggccttc 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_a06.g1 MSMg01no052_a06.g1 CHROMAT_FILE:
MSMg01no052_a06.g1 PHD_FILE: MSMg01no052_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:30 2005
(633 letters)
>mm_chr9_21546521_21547552
Length = 1032
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 322 ggagatgggcaccatcactgccccaacctgaatttctgagacagcgtctcattgaaccta 381
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1032 ggaggtgggcaccatcactgccccaacctgaatttctgagacagcgtctcactgaaccta 973
Query: 382 gagctcactgaggctacactggctggctggtgtgtcccaggcattttcctgtctcttgat 441
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 972 gagctcactgaggctacactggctggctggtgcgtccc-ggcattttcctgtctcttgat 914
Query: 442 gaactctgggttccactcctagcatcaatcaatcaatcaactctgggttccactcctagc 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 gaactctgggttccactcctagcatcaatcaatcaatcaactctgggttccactcctagc 854
Query: 502 atcaatcaatcaatcaatcaactccatgaagtagctgtaattccaatacttctttctaaa 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 atcaatcaatcaatcaatcaactccatgaagtagctgtaattccaatacttctttctaaa 794
Query: 562 tctctagacaagagcttttcctcagtcttggcttgaatggataagacaaaccccctcaca 621
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 793 tctctagacaagagcttttcctcagtcttggcttgaatggataagacaaa-cccctcaca 735
Query: 622 ttcccagggttc 633
||||||||||||
Sbjct: 734 ttcccagggttc 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
