Query= MSMg01no052_f11.b1 MSMg01no052_f11.b1 CHROMAT_FILE:
MSMg01no052_f11.b1 PHD_FILE: MSMg01no052_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:56 2005
(383 letters)
>mm_chr9_20593144_20593922
Length = 779
Score = 607 bits (314), Expect = e-178
Identities = 338/348 (97%), Gaps = 4/348 (1%)
Strand = Plus / Minus
Query: 1 aagtgctttaccacctgatattggacaataatagaacagggcatctgacactctcctgtg 60
|||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 344 aagtgctttaccacctgagattggacaataatagaacagggtgtctgacactctcctgtg 285
Query: 61 gtttctatatgtgtatatgggcacgtgtacacacatatcacatatacatgcacataagga 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 284 gtttctatatgtgtatatgggcacgtgtacacacatatc----atacatgcacataagga 229
Query: 121 tggtgaatgatgggtggctggtggctttgtgtaaacttgagagaagagcatttaaggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tggtgaatgatgggtggctggtggctttgtgtaaacttgagagaagagcatttaaggtga 169
Query: 181 agggagggatgtgtgcaaaggctctcgggcaggaacatgcaggcatacctggggaatttg 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 agggagggacgtgtgcaaaggctctcgggcaggaacatgcaggcatacctggggaatttg 109
Query: 241 gaggtgggtagtatggctgctgtgcgaaccagaatgaggtgaggaggagggtgcggggcc 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 108 gaggtgggtagtatggctgctgtgggaaccagaatgaggtgaggaggagggtgcggggcc 49
Query: 301 actctgaagatgctgcggctggaggaggcaaaagaaagccatcggatt 348
||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 48 actctgaagatgctgcggctggaggaggcaaaagaaagccaccggatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 779
Length adjustment: 9
Effective length of query: 374
Effective length of database: 770
Effective search space: 287980
Effective search space used: 287980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_f11.g1 MSMg01no052_f11.g1 CHROMAT_FILE:
MSMg01no052_f11.g1 PHD_FILE: MSMg01no052_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:56 2005
(246 letters)
>mm_chr9_20468078_20468722
Length = 645
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 tttccactagctatattcccagggctgcaaatacctctgagccccaccacgtccagaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tttccactagctatattcccagggctgcaaatacctctgagccccacca-gtccagaccc 259
Query: 61 acttgtataagcaccctggggactgttcaggtatgcgcagaccaccccaccaccccaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acttgtataagcaccctggggactgttcaggtatgcgcagaccaccccaccaccccaccc 319
Query: 121 cacttccagctgttaggtctggagtgatcccaagagaacctggcttagcatctgccttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cacttccagctgttaggtctggagtgatcccaagagaacctggcttagcatctgccttgg 379
Query: 181 cacacccccggtgcccatccatccccctcagcacacagacagactgcttattggtgagaa 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacacccccggtgcccatccctccccctcagcacacagacagactgcttattggtgagaa 439
Query: 241 caaatc 246
||||||
Sbjct: 440 caaatc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 645
Length adjustment: 9
Effective length of query: 237
Effective length of database: 636
Effective search space: 150732
Effective search space used: 150732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
